Oncorhynchus mykiss (rainbow trout): 110530424
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Entry
110530424 CDS
T07259
Name
(RefSeq) cadherin-4
KO
K07597
desmoglein 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04382
Cornified envelope formation
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110530424
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110530424
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110530424
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Major cadherins
110530424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
110530424
NCBI-ProteinID:
XP_021469156
Ensembl:
ENSOMYG00000001398
UniProt:
A0A8C7NE93
LinkDB
All DBs
Position
8:68873437..68898424
Genome browser
AA seq
1177 aa
AA seq
DB search
MARVATATVLLLPFILTFLCVVAAEGGGLKLRRQKREWIIPPKRLKENVDYTSQEYIAKI
RSDEQYTSKVTYSLTGIGADQNPRSLFTVNPNTGLVRINGILDREKIPSYHLLGVATYNN
GSKAEKDIDLRISVEDQNDCQPVFVFGQSGSVNESSVAETVVMKVLATDADEVNTLHSQI
YYSIVQKSSSDSMFAINYQTGEIMVRQTTLDRETQDTYTLTVKGSDMNGAMGGNSGTGQV
VIKILDINDNIPTLEKESYEGSVLENTVNVEVLRIKATDLDLMYTENWLAVFTIITGNEA
GYFTITTDSKTNEGIIMITKALDYEELKVLNLAISVSNKAVYYFGSSSMSGGIGGGGVAG
GVMTGGGKTYPIKINVINQKEGPKFQPMVKVVTISEDSTTVTINKVITTYAAIDSDTLLT
ATNVRYAKKSDVDNWLIIDEKTAEIKLNKVPDRESKYLVNGTYYAKIIAITTDLPSKTAT
GTIAIQVEDFNDHCPILTATATTMCLGDTIVYVKAVDGDTFPNGAPFKFRVIQGDSKQKW
TVEHLNATTAILRDHAHMWPGHYKVAVEISDQQGKACADIQILNVDVCTCDQVNKVCFAR
EMGKDVTLGASAILLLLLGLLLLLLVPLLLLFCLCGGVASIGDFKAMPFDTKEHLIPYHT
EGQGEDKEIPLLQIPVAIDGSIKVVDLANNGGGMGLIRDAGAAGGSAGGVFGDGFTPSAI
STWEHNHSHGSHQPSGRVKVSYGVGGGTMTGHEHFSRYGAGAYDGVALSEGDLEEYYSAK
ANHAAQNDQQRDDLLIYDYEGQGSPVGSVGCCSLLGADDDLDFLNDLGPKFKTLAKICQG
SIAMEAETVNMSVSSPRPRPTTSTHTEVNRDTALNVNTLNTSSTTSTSSTPLQENLVTRA
QGSATIRKVQENKVMPNKTLFIQQPPMYYAAAPTMYMVEPQPQLVLVEQRGGGGYVRAQQ
AVSQVGVGMGQGVVQVGGLHGSQGMILLERQVGAGGSGEGQGHVVMGASQVLQGAGHTIL
RGGHIITETSQTITRGGQVLQGADQTMIGKGHLSPGGNFSQGSLSGSRKVLVVESGSGSA
SAAGCSAGLGAAQVTMLQSGQGLEVKCHSVEVRGQSGASSLSSSSLCGTAGSNEASATAV
KVTTTPTAAPCSSSHTAVVQEKKISVTEKYVETSTIA
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgtagccacagccactgttttattattgccgttcatactaacgtttttatgt
gtggtggcagcagaaggcggtgggctgaagctgagaagacagaagagagaatggatcatt
cctcctaagaggttgaaggagaatgtagattacaccagccaagagtacattgcaaagatt
cgctctgatgagcagtacacgtcaaaggtgacttactcactgactgggatcggtgcagac
caaaaccccaggagcctattcactgtcaacccaaatacaggcctggtcagaatcaatgga
attctggacagagagaagataccttcctaccatttacttggagtagcgacatacaacaat
ggaagcaaagcagagaaggacattgacctgcgtatttccgttgaggaccagaatgactgc
caaccagtgttcgtttttggccaatctggatctgttaatgagtccagtgttgcagaaacc
gttgtcatgaaagttttagccacagatgcagatgaagtgaacacgctacactctcagatt
tactatagcatagtgcagaagagttcttcagatagcatgttcgccatcaactaccagact
ggagagatcatggttcgccagactacgctggacagagagacccaagacacctataccctg
actgtaaaaggctcagacatgaacggagcaatgggtggaaactcaggaacaggacaggtg
gtgattaaaatcctggacatcaacgacaacatccccaccctggagaaagaatcttacgag
gggagtgtgttggagaacacggtcaatgtggaggtgctgaggatcaaagccactgatctg
gacctgatgtacactgagaactggctggctgtgttcaccatcatcacaggcaacgaagcc
ggctacttcaccatcactaccgactccaagaccaacgaaggcattattatgataaccaag
gcactggactacgaggagctgaaagtgctcaaccttgccataagtgtttccaacaaagca
gtgtactactttggctcctcttctatgagtggagggataggaggaggaggggttgcaggc
ggggttatgacgggcggtggtaagacctaccccatcaagataaatgtgatcaaccagaaa
gagggccccaaattccagccaatggttaaagtggtgaccatctctgaggactccaccaca
gtcaccattaacaaggtcatcactacctacgcagccatcgacagtgacacactactgact
gctaccaatgttaggtatgccaaaaaatccgatgtagacaactggctgatcatagatgaa
aagacagcagagatcaagctgaacaaagtgcctgatcgggagtccaaatacctggtcaat
ggaacatactacgccaagataatagccatcacaaccgatctgccatccaaaacggccaca
gggacaatagctatccaggtggaggactttaacgaccactgtcccatactgacagctacg
gctacgaccatgtgtctgggggacaccattgtgtatgtcaaggctgtggatggggacacc
ttccccaatggagctcccttcaagttcagagtgattcagggggacagcaaacagaagtgg
acagtggagcacctcaatgctaccactgccattttacgagaccatgcccacatgtggcca
ggtcactacaaggttgctgtggagatcagtgaccagcaggggaaggcctgtgctgacatc
cagattctgaacgtggatgtgtgcacctgtgatcaggtcaataaggtctgcttcgcccgg
gagatgggtaaggacgtcacattaggagcatctgccatcctgctgctccttctgggcctc
ctgctgttgctgctggtgcccctcctgctgctgttctgtctgtgtggaggagtggcgtcc
ataggtgactttaaggccatgccatttgacactaaagaacacctgattccatatcacacc
gagggacaaggagaagacaaggaaattccactcctgcaaattcctgtggcgatagatggc
tccatcaaagttgttgacttggcaaacaacgggggggggatgggattaataagagatgca
ggggctgcaggaggatcagcaggaggagtgttcggggacggcttcaccccgtccgcaata
agcacatgggagcacaaccattcccatggctcccaccagcccagcggcagagtgaaggtg
agctacggcgtgggtggaggaaccatgactggacatgaacacttttccagatatggagct
ggagcttatgacggggtcgctctctccgagggagacctagaggagtactactctgcaaag
gccaatcatgctgcgcagaacgaccagcagagagatgacctactgatctacgactacgaa
ggtcaggggtcaccggtaggctctgttggctgctgcagcctcctgggggccgatgacgac
ctggacttcctcaacgacctggggcccaagttcaagaccctggccaagatctgccagggg
tcaatagctatggaggcggagactgtcaacatgtctgtgtcatcccctagacctaggcct
accacatccacccacacagaggtcaatagagacacagctctcaatgtcaataccctgaac
acctcatccaccacctccacctcctccacacccctacaggagaacctggttactcgggcc
caaggatcagccaccatccgcaaggttcaggagaacaaggtgatgcccaacaagaccctc
ttcatccagcagccccctatgtactacgctgctgcccccaccatgtacatggtggagccc
cagccccagttggtgctggtggagcagagagggggaggtggttatgtccgtgcccagcag
gcggtaagccaggtgggggtagggatgggtcagggggtggtgcaggtaggagggctccat
ggttctcagggcatgattttactggagaggcaggtaggagcaggtggtagtggggaagga
caaggtcatgttgttatgggggcaagccaggtcttacagggagcgggccacactattttg
aggggaggtcacattattacagagacgagccaaaccattacacggggaggccaggttcta
cagggggcagaccagaccatgatcggaaaaggccatctatcgccaggaggaaacttctca
cagggaagcctttccgggtccaggaaagtgctggttgttgagagcgggtctgggtcagcc
tcggcagcagggtgcagcgcaggcttaggtgctgcccaggtcaccatgctgcagagcggc
caggggttagaggtcaaatgtcatagtgtagaagtgagaggtcagagtggtgcttcctcg
ttgagctccagctccctgtgtggcacggcagggtcaaacgaggcctctgctactgctgtc
aaagtcaccaccacacccacagctgcaccctgtagcagcagccacacagctgtggtgcaa
gagaagaaaatatcggtcactgagaaatacgttgagaccagtactatagcgtag
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integrated database retrieval system