Oncorhynchus mykiss (rainbow trout): 110530567
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Entry
110530567 CDS
T07259
Name
(RefSeq) nicastrin isoform X1
KO
K06171
nicastrin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110530567
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
110530567
NCBI-ProteinID:
XP_021469432
Ensembl:
ENSOMYG00000020164
UniProt:
A0A8C7VQZ1
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All DBs
Position
8:complement(74301947..74317772)
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AA seq
699 aa
AA seq
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MVLESSKWVMFIVGWLFKNVSCNAVAQKIYVELNNTVPCVRLLNATHQIGCQSSISGDTG
VIHVLESEADLEWPLSKGPNPPYMVLLESSLFTKSIMMKMKNASSRVAGVVVVPKTSQPE
FSPHTTCPNENTGVYTETYDHNLAHCNTTVWNPRGNGLSYEEFDFPVFSLKEDNETEVIK
QCYFDHNRVVNGSGLQYPLCAMQLFSHMHAVTDTATCMRRSSMDFSTSPVMVCDPLGGYN
VCTFIRPYNSTAFGHKENESVVIAAARLDSRAFFLEDSTGAEGSVSGFVTLLAAAQALRE
ATQEAPPTRNILFAFFHGEVFDYIGSSRMVYDMKNNMFVIDLDNVHSILEIGQVAVRSGT
NLFLHSDPVSRRNNTVHDEVTNLVKNLQSSTAGLNLSFVETGFSQPLPPSSFQRFLRARA
IPGIVLADHQTDFNNRYYESFYDNAAHLNLTYPSNLSPEEQLEFVTDTAKSLTEVATAVA
RALFKQAGGNNSQVNKINADPKTVTQMLYGFLVRSNNSWFQAVMAPELKDILQPNPPQYY
VGVAKSSHQANALTYLVQYLLANLTGTATNLTQSQCKKPDELPNESTYLYSYLWVQGVVP
PNSTQRESFCVRTAVRLVKAVSPAFDLGDYVSKEYSTWTKSQWKFIKARIFLVASRDLEM
LTLGVGVAVLFTSLLVTYFVSTKADVLFSSVREPNNTAY
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggttttggaatcatcgaaatgggttatgttcatagttggttggcttttcaaaaatgtg
agttgtaacgctgttgcgcagaagatttatgtcgaactgaataacactgtaccatgcgtc
cgactgctcaatgctacacatcagattggctgccagtcctcgatatcaggtgatacaggg
gtgatccatgtcttggagtctgaggcagatctggaatggcctttgagcaaaggacccaat
cctccttatatggtcctgttggagtcatccctcttcaccaagtccatcatgatgaagatg
aagaatgcctccagcagggtggcaggggttgtggtggtcccaaaaactagccaaccagag
ttctcgccacatacgacatgtcccaatgagaacacaggtgtttacacggaaacctatgat
cataatttagcgcactgtaacacgactgtatggaatcctcgggggaacggtctgtcctat
gaggaatttgacttccctgtcttctccctgaaagaagacaatgaaacagaggtcatcaaa
cagtgctactttgatcataatcgtgtggtgaacggcagtggcctgcagtaccctctgtgt
gccatgcagctcttctctcatatgcatgctgtcactgacactgcaacctgcatgagacgc
agcagcatggacttcagcacctccccagtgatggtgtgtgaccctcttggtggttataat
gtgtgtactttcatccggccttataacagcaccgcctttggtcacaaggagaacgagagt
gttgttatagcagcagccaggctggacagcagggcatttttcttggaggattctacagga
gcggaggggagtgtctcagggtttgtcactctgctggctgctgcccaggcactacgtgaa
gccactcaggaagcccctcccacacggaatatcctctttgccttcttccacggggaagta
tttgactacattggcagctctcgaatggtttatgacatgaagaataacatgtttgtgata
gacctggataatgttcactcaatactggagattggacaggtagcagtgcgcagtggcacc
aacctatttcttcactcagaccctgtgtccaggaggaacaacaccgtccatgacgaggtt
acgaatcttgtaaaaaacttacagtcctccacggctggtctcaacttatcatttgttgag
acaggtttttctcaaccactcccgccctcctcctttcagcgtttcctccgagctcgggca
attccagggattgttcttgcagaccatcaaacagatttcaacaataggtattatgagagt
ttttatgacaatgctgcccacctgaacctgacttatccatctaacttgagtccagaggaa
cagctagagtttgtgactgatactgcaaagtctcttaccgaggtggctactgcagttgcc
cgcgctctcttcaagcaggctgggggaaacaactcccaagtaaacaaaatcaatgcagac
cccaaaacagtgacccagatgctgtatgggtttctggttagatccaacaacagctggttt
caggcagtgatggccccagaactgaaggacatcctccagcccaacccaccccagtactac
gttggtgttgccaagtcgtcccatcaggctaacgcactgacctatctggtccaatatctc
ctggctaatttaacgggaacagccaccaacctcacccagagccagtgcaagaagccagat
gagctgccaaacgagagcacatatttgtactcttatctctgggttcagggcgtggtccca
cccaacagcacccagagggagtctttctgcgtacgcacagcagtacgcctggtcaaggca
gtgtcccccgctttcgatctgggggattacgtttccaaagaatattccacatggacaaaa
tcgcagtggaagttcatcaaagctcgaattttcctagtagccagccgggacctggagatg
ctgaccttaggcgtgggagtggccgtgttgttcacatcgctactggtcacatactttgtc
agtaccaaggcagatgtcctcttcagctccgtcagggaacccaacaacaccgcatactga
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