Oncorhynchus mykiss (rainbow trout): 110530620
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Entry
110530620 CDS
T07259
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3 isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110530620
Membrane trafficking [BR:
omy04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
110530620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Motif
Other DBs
NCBI-GeneID:
110530620
NCBI-ProteinID:
XP_036842156
Ensembl:
ENSOMYG00000028210
UniProt:
A0A8K9XJL7
LinkDB
All DBs
Position
8:75388627..75444838
Genome browser
AA seq
1434 aa
AA seq
DB search
MASKETTAAVFINVSREITESIRRLTDKQSIKFVRAVKQDTKNGKSEDRILVLATWRLFL
FSVKVPSKMEVTFNFLEIRAMNTYPDHQVVIDTDKSTHSLRLQSQDHLDHMMSHVNYALS
RIFNNSMYAPAICRTEGDVSDGVQKFSPNSESSVETQKTCGGFSETYAALCDYNGIGCKE
EVQWDVDTIYHSQDNREFNLLDFSHLDSRDLAVMVASMAYNTWFTKLYCKDMRIGSEVVE
QVLHTVSKSSSLEELTLENAGLKSDFPQKMATALSENPASVIHSLNLAHNPLDNQGVSNL
IQLVCRLNKGLRLLNLSKTSLSSKGVVSLSQALCSSDDYTNSLLHLDLSKNPGILSGEDA
TNMYLFLAQTNCLVHLDLSGTDCAVDSLFGALLRGCCADLSYLNLSKNCFSHRKVRETLP
VFRQFFSSAFSLTHVNLSSMKLPLDTLRALFLGLSCNPHITDLHLDISGCELRSAGAGVL
QELFPRVACIGTLDISDNGLDGDLLGVIPAFSRHPSLKHLLLGKNFNIKGRVLHEILQKL
VQLVQDEECALQSLSLADSRLRSRGTVMVNALGSNACLRKVDLSGNSLEDAGAKMLSKAL
QINTTLRSVTWDRNNTTATGFQDVARGLEHNFTLQYMPIPLSDVTQAYRSAPEKIDQALT
KIQHALLRNNQTQRFSQKQALRLHQGLVTSTAEQVMERLCVRVHQQVCVLRGSEEGKELQ
AARQVLKEARNSRALYPSLCELVHVLSVDGPVRQKLDFLAGELTKAADKELQVIVDSMVS
LCRELCPMSSSAAERLNPPLSSISERVSIPRSTIRTALMERAAQDINRALEEVKLSVVSY
LTNSIVDQILQELYTTHKALLRQVSQVKRWDDGGTGRHTIRITDTLDFPDEEGLGMNIDT
IAIQKRSARTRRIRPVSTRLSLGDDPTSSPPPSALSHSAPLSRSASWECLSSLPTHGAPL
HHVTHARPRPPRRHSRGQVPLDTHCSENGGVNLLEDGLPDFYTKRVLTDSQLSSLHHAQS
LRRKKRRSVLSIFSGFRKNRNSTISNQETDGSENVYSMIQHPKDPGKVEAMIEVGANGRM
MPSPRPIQSVPLPGMRGASPSPHCLTQRQPSDLVSMVYSCIGAEDEDSDSSFETRPVDRD
TDRSTTSDIQTETHANGHAMSSASLTDRQPDRQPDRQTDPVSQDLPMPSTQTDTQKEVDR
GTKGTESLDRQEGAPCGQKSEPPSQSSKPSLASMRQRHLQGSSDKSTDGVGWIDRDGLEE
EKNEKKDRGAEGQRPPIPEKPGKDKTSPKTPSAVTPPEETANERTPPPVPTASTKPTFDL
SGPSVTQDGGTNEMKSLPPVPPASTKPVVDAGLPPAGCQDEGGTNGFPLKAHHNRKANSC
DAGMEPDSPNDLERGFSDRESPVKKPRLPQNRNRSLDTGCPECPEPGTGNGETS
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaaagagaccaccgctgcagttttcattaacgtcagcagggaaattacagag
agcatcaggaggctcactgataaacaatccatcaaatttgtgcgagctgtgaagcaggac
accaagaacggcaaatcagaggaccggatactggttctggcaacatggcgactctttcta
ttttctgtcaaagtcccctccaagatggaggttactttcaacttcctggagattcgggca
atgaacacttatccagatcatcaggttgtaatagacacagacaagtcaacccactccttg
agactgcagtcacaagaccaccttgatcatatgatgagccatgtcaactatgccctctca
agaatattcaacaactctatgtatgctccggccatctgtcgaacagagggggacgtctct
gatggagtccaaaagttttcaccaaactctgaatcatctgtagagactcagaaaacttgt
ggcggtttctctgagacctacgcagctctgtgtgactataatggcatcggctgtaaggag
gaagtgcagtgggatgtggacaccatctatcactctcaagacaacagggagttcaacctg
ttggacttcagccacctggacagcagggacctggcggtgatggttgcttccatggcgtac
aatacttggttcaccaaactctactgcaaagacatgcgcattgggtcagaggtggtggag
caggtccttcacaccgtcagtaagtccagcagtctggaagaactcactctggagaatgct
ggcctcaaatcagatttccctcagaaaatggcgacagctctgtctgaaaaccctgcctct
gtgatccactcactcaacctggcccacaaccccctggacaaccaaggagtgtcaaacctc
atccaactggtgtgtcgcctcaacaaaggccttcgtctgctcaacctctccaagacgtcc
ctctcctctaagggtgtggtgtctctctcccaggccctctgctccagtgatgactacacc
aactctctgcttcacctggacctgagtaagaaccctgggattctgtctggggaggatgct
acgaacatgtacctcttcctagcccagacgaattgcctggttcatttggacctctctggg
actgactgcgctgtggactcgttatttggcgctctgctgaggggatgttgtgctgatctc
tcttacctgaatctgtccaagaactgcttctctcacaggaaagtgagggagactcttcct
gtcttcaggcagttcttcagctcagccttcagtctcacacacgtcaacctgtcttctatg
aagcttcctctggacaccctgagagctctcttcctgggcctgtcttgcaatcctcacatc
actgatttacacttggacatcagcggctgtgagctgaggtctgcaggtgccggggtgctc
caggagctgtttcctagagtggcctgcatcggaactttggacatatcagacaacgggttg
gatggcgacctgctgggtgtcatcccagccttctccagacacccctccctcaaacacctg
ctgctgggcaagaacttcaacatcaagggcagggtactacatgaaattctgcagaaacta
gttcagctagtacaagatgaagagtgtgccctgcagtccctttctctggctgactcgcgc
ctgcgctctcggggcacggtgatggtgaatgctctgggaagcaatgcttgcctacgcaag
gtggatctgagtgggaacagcctggaggatgcgggggctaagatgctcagcaaagccctg
caaatcaacactacactcaggagtgtgacgtgggatcgcaataacaccacggctacagga
ttccaagatgtggctcggggcctggaacataacttcaccctgcagtacatgcctatcccc
ctcagtgatgtcacacaggcataccgaagcgcacctgagaagattgaccaagcactgacc
aagatccagcatgctctgctgaggaacaaccagacccagaggttctctcagaaacaggct
ctgcgtctacaccagggcctggtcaccagcactgctgaacaggtgatggagcggctgtgt
gtacgcgtacaccagcaggtgtgtgttctccgaggctcagaagaaggaaaggagctgcag
gctgccagacaggtcctgaaggaggccagaaactctcgtgcgctatacccatctctgtgt
gagctggttcatgttctctcagtggatgggcctgtcagacagaaactggactttctggca
ggagagctgaccaaggctgctgataaggaactacaggtgatagtagactccatggtgtct
ctgtgtcgggagttgtgtcccatgtcctcctctgcagcagagagactcaaccctccgctc
tcatccatctcagaacgcgtctctatccctcgctccaccatccgcaccgccctgatggag
agagcagcacaggacatcaacagagccctggaggaggtaaagctgtctgtggtctcctat
ctgaccaactccatagtggaccagatccttcaggaactctacaccactcacaaagccctg
cttcgtcaggtgtcccaggtgaagcgttgggatgatggaggaacaggcagacacaccatc
agaatcacagacacactggacttccctgatgaggaaggcctgggcatgaacatcgacacc
attgccatccagaagcgcagcgccagaacccgaaggattcggcctgtgtccaccagactg
agtctgggagatgatcccacctcctctcctccaccctcggccctgtctcactctgccccc
ctgtcccgctcagcatcatgggagtgtctatcctcattgcctacccatggtgcaccactg
caccacgtgacgcacgccaggccgcggccccctcgaaggcacagccgaggacaagtccct
ctggacacacactgttcagagaacggaggagtcaacctgctggaggatggactgcctgat
ttctacaccaagagagtcctgactgacagtcagctgtcatcacttcatcatgctcagtcc
ctgaggaggaagaagagacgcagtgtgctgtcaatcttctctgggttccgcaagaatcgc
aattccaccatctccaatcaggaaacggatggctcagagaatgtgtactctatgattcag
caccctaaggatcctgggaaggtggaggccatgattgaggtgggggccaatgggaggatg
atgccgtcccccaggcccatccagagcgtaccactgcctgggatgaggggggccagcccc
agcccccactgtctcacacagagacagccttcagacctggtcagcatggtgtacagttgt
atcggagcagaagatgaggactccgacagtagctttgagaccagaccagtggacagagac
actgacagatcgactacatcagacatccagacagagacccatgccaatggacatgcaatg
tcctccgcttctctgacagacagacagcctgacagacagcctgacagacagacagatcca
gtcagtcaggacctgccaatgcccagcactcagacagacacacagaaggaggtggacaga
gggacaaaggggacagagtcgttggataggcaggagggagccccctgtggacagaaatca
gaacccccttctcagagcagcaagcccagtctggccagcatgagacagagacacctgcag
gggagttccgataaatcaacagatggtgtaggatggatagatagagacgggttagaagag
gagaagaatgaaaagaaagacagaggagcagaaggacagcgtcctcccattcctgaaaag
cctggtaaagataagacttctccaaagacaccgtctgctgtcactccacctgaggaaaca
gccaatgagagaaccccgcctcctgttccaactgcctctaccaagcccacttttgatttg
tctggtccttctgtcactcaagatggaggaactaatgagatgaaaagcctgcctcctgtg
ccacctgcgtctaccaagccggtggtagacgcaggtctaccacctgctggttgtcaagat
gagggaggaacaaatggttttccactgaaggcacatcacaacaggaaagcaaactcatgt
gacgcaggcatggaaccggacagtcccaacgatctggagagggggttctcagatcgcgaa
tcccctgtgaaaaaacccagactcccccagaacagaaacagatctctggacactgggtgt
cctgaatgtcccgagcccggcaccggcaacggtgagacgtcatga
DBGET
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