Oncorhynchus mykiss (rainbow trout): 110530636
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Entry
110530636 CDS
T07259
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110530636
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Protocadherins
110530636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
110530636
NCBI-ProteinID:
XP_021469523
Ensembl:
ENSOMYG00000001961
LinkDB
All DBs
Position
8:75795257..75799474
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AA seq
1006 aa
AA seq
DB search
MGMRGWNWWVLVGIPLAVLPTLTQGKTVKYETFEEDAPATVIGNLAKDISSSPSSGSKTN
FRMMKQFNSSFIRLRESDGQLTIGERIDRERICKHTLHCLVAFDVVSFSKEQFKLIHVEV
EVKDINDNSPEFPRKESSLEISENTAVGTRIPLDFAVDEDVGLNYIQSYQISVNSHFTID
VLSRADGVKYAELVLMKELDRETQASYALELVAMDGGNPSRTGSTRINIKVKDYNDNSPL
FDRSSFTVDLPEDAPVGFLLLDLNAEDPDEGLNGEVVYGFGHQVPSEIRQLFRVDRKTGR
LTLESPIDFESKKTYEFDVQAVDLGLNPSPAICKIVVRVQDVNDNAPEISITPMTSITAG
IAYITEAASRESFVALVSTSDMDSGANGQVHCTLYGHDHFRLQQAYEDSFMIVSTSPLDR
EKIPEYNLTVVAEDLGSPPFRTITQYTIRLMDENDNAPVFSKSAYEVAVVENNTPGAYIT
TVVARDMDLGHNGKVIYKLADTYIMGSPVSTFVSLDPASGSIYALRSFNYEVMKQLELCI
TASDGGSPPLTGTASIHVRIVDQNDNAPVINQPALNNGSSEILLPRDAPSGYVITRVEAR
DADEGVNAELSYRLASGEGSMFSVNKATGEVYLNRELSHDVDETLRMTVTVSDNGRPALT
ATATLHFLIIVGAPPNDRTVYWAGSGEAGEHAQWDLSVVIIVVLAGSCTLLLLAIILIAT
TCNRRKRDKTGDDTDSYGEKEILERGKNISDNPLLPLHGTVGGFEAHTFSSQPGFTGGHT
GSSDLCSTSEDGREAPCVYEPDSKPKGYSTLPGYGNSYNNGKEAVRPITIWKGNSYTTIS
ARDPAFSGKDSGKGDSDFNDSDSDISGTDLKKEGVPVHPMGCHSGLWACTSECKVLGHSD
RCWSPSAVRAHIGPSLVPTPTSQTVSSFNSFSKTASLPRDSLRRDNYYQAHIPKTTGLQS
VYEKVLHKEYDYVLVTPPRPLRVQEISDITIPVYSPTTTRCPSNEV
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgggtatgagagggtggaactggtgggtgctggtgggcattccactggctgtcctgccc
actctcacgcagggaaagacagtgaagtacgagacatttgaggaagacgcccctgcaact
gtcattggaaacttggccaaggacatttcatccagcccctcctccggctccaagacaaat
ttcaggatgatgaaacagttcaactcgtcttttatccgtttgagggagagcgacggacag
ctgactatcggagagagaattgacagagagagaatctgtaaacacacccttcactgcctc
gtcgcctttgatgtggtaagcttctccaaagagcagttcaaactcatccacgtcgaggta
gaggtcaaggacatcaacgacaattcccccgagtttccacggaaagagtcgagtctggag
atctccgaaaacacagcggtgggcacgcggatcccgttagatttcgctgtggatgaagat
gtggggttgaattacatccagagctaccagatctccgttaacagtcacttcaccatagac
gtgctcagcagagccgacggggttaaatatgcggagctcgtgctcatgaaagagctggac
cgtgagacacaggcttcctatgcgctcgagctggttgctatggacggcggcaacccgtcc
cgcacgggatccacgcgcatcaacatcaaggtgaaagactacaatgacaacagccccttg
ttcgacaggagcagttttacagtggacctccctgaggatgcaccagtagggtttctctta
ctggacctgaacgcagaagacccggatgaggggctgaatggggaggtggtgtatggtttt
ggtcaccaggtgccatccgagataagacaacttttcagagtagaccgcaaaacgggaagg
ctcaccctcgagagccccattgactttgagagcaagaaaacgtacgaattcgacgtccag
gcggttgacctgggtctgaacccaagccccgccatctgtaagatagtggtgcgggtccag
gacgttaacgacaacgcaccagagatctccatcacccctatgacgtccatcacggctgga
attgcctatatcacggaggctgcatcgcgcgagagttttgtagcgctggtcagcacctct
gacatggactctggagctaacggacaggtgcactgtacgctctatggccacgaccacttc
aggctgcagcaggcgtacgaggacagcttcatgatagtgagtacgagcccgttggaccgg
gagaagatccctgagtataatctaacagtggtggcagaggacttgggctccccaccgttc
agaaccatcacccagtacaccatccggttgatggacgagaatgacaatgctcctgtgttc
agtaaatcggcgtatgaagtggctgtggtggagaataacaccccgggggcctacatcacc
acggtggtcgccagggacatggacttgggacacaacgggaaggtgatctacaagctcgct
gacacctacatcatgggctccccggtatctacgtttgtctcactggaccccgcgagcggc
tccatttacgcactcaggagcttcaactatgaagtcatgaaacagctggaactctgcatc
acagccagcgacggtgggtccccgcccctcaccggaaccgcaagcattcatgtcaggata
gtggaccagaatgacaacgcacctgtcatcaaccagcccgcactaaataatgggtcctct
gagattctgctgccccgggacgcaccctcaggctacgtcatcacccgggtggaggcgcga
gatgctgatgagggcgtgaatgcagagctgtcctacagactggcatctggagagggttcc
atgttctccgttaacaaggccaccggagaggtctacctcaaccgcgagctcagccacgac
gtggacgagaccctgcgcatgaccgtcacggtgagtgacaatgggagacctgcgctcacc
gccaccgctacgcttcatttcctcatcattgtgggcgccccgccgaatgacaggacggtg
tactgggcaggcagcggggaggcgggggagcacgcacagtgggacctgtcagtggtgatc
attgtcgttctggcggggagctgcacgctcctgctgttagcaatcatcctcatcgccacc
acctgcaaccggcggaaacgggacaagactggagatgacacagactcgtatggggagaag
gagatcctggaaaggggcaagaacatcagcgacaatccactgctgccgctccatggaacc
gtgggagggtttgaagctcacaccttctctagccagcccgggtttactgggggacacact
ggcagcagcgacctgtgctccacctctgaggatgggagagaggcaccatgcgtctacgaa
ccggacagcaaacccaagggctactccactctgcccggctacggtaacagctacaataat
ggtaaagaggcagtcagaccaatcacaatctggaagggcaactcctacaccaccatctcc
gcgagagaccccgcgttcagcgggaaggacagcgggaaaggcgacagtgactttaacgac
agtgacagtgacatcagtggcaccgacctgaagaaggagggggtaccggtacaccccatg
ggctgtcacagtggtctatgggcatgtaccagtgaatgtaaggttctgggccactctgac
cgctgctggagcccctcggctgtccgtgctcacattggtccctcactcgttcccaccccc
accagccagactgtctcctccttcaacagcttttccaagactgcctcgctgccccgggac
tcgctccggagagataactattaccaggcgcacatccccaaaacaacgggcctgcagagc
gtgtatgagaaggtactacataaggaatatgactatgtcctggtcactcctcccagaccc
ttgagagttcaggagattagtgacatcactatcccagtctatagtcccaccacgacacgg
tgtcccagcaatgaagtctaa
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