Oncorhynchus mykiss (rainbow trout): 110530727
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Entry
110530727 CDS
T07259
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110530727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110530727
Spliceosome [BR:
omy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
110530727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
110530727
NCBI-ProteinID:
XP_021469654
Ensembl:
ENSOMYG00000026761
UniProt:
A0A8C7S0N7
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All DBs
Position
8:79587340..79596019
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AA seq
514 aa
AA seq
DB search
MANNTVAGNQQQGQAVNKIGPNPGKHGNNLPLWGNEKTMNLNPMVLTNVLSSPYFKVQLY
ELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFT
LKMTRKQVMGLITHNDSPYIRALGFMYIRYTQPPADLVDWYDGFLDDEEELDVKAGGGCV
MTIGEMVRSFLTKLEWFSTLFPRIPVPVQKMIDTQMKARPRKVPEKVEEPVEPVPEEGRA
TEGRRRSRSPRRSPKRSRSRSHHRERERHGPSFDRELERERDRQRKEREGKDGDRRGGDR
ERERGEKEREGKDGDRRGGDRERERGEKERDRGGERERRRSRSRERKGERKDREKEREGG
GENDKSRRKGSDRGRERSKDKRSKGETEDRRHKEERDERRGHREERKAKRSSRSGSRERR
HKEKSKKRGEVQEESGSKSRAEVGEKEKSRKRERSHERGEGEQRSHKRSRSKERSHRPRE
PSNGKDHGKHRERRRSQSMDRGERTTQSARAESP
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaacactgtagccgggaatcagcaacaaggacaggctgtgaacaagattggc
cctaaccctggaaaacatggcaacaacttgcctctctggggcaacgaaaagactatgaac
ttgaaccctatggtcctcaccaacgtgctctcatctccatatttcaaggttcagctctat
gaactgaaaacctaccatgaggtggtggatgaaatatatttcaaggtgactcatgttgag
ccctgggagaaaggcagcaggaagactgctggacagactggaatgtgcggaggggtgcgt
ggagtcgggacaggcggcattgtgtccacggccttctgcctgttgtataagctgtttacc
ctcaagatgacccgcaagcaggtgatgggactgataactcacaacgactcgccctacatc
agagcacttggtttcatgtacataagatacacccagccccctgcagacctggtggactgg
tatgatggtttcctggatgatgaggaggagctggatgtgaaggccggaggcggctgcgtt
atgaccatcggtgagatggtccggtcgtttctcaccaagctggagtggttctccacactc
ttcccacgcatcccggtgcctgtgcagaagatgattgacacacagatgaaggcaaggccc
cggaaggttcctgagaaggtggaggagccggttgaacctgtgccagaggagggacgggcg
acagaagggcgtagacgctcccggagccccaggaggtcccccaaacggtcgaggagcagg
agccaccaccgcgaacgagagcgccacggcccaagcttcgaccgcgaactggaaagggaa
cgtgaccgccagaggaaggagagggagggtaaggacggggacaggagaggaggggacagg
gagagggagagaggggagaaggagagggagggtaaggacggggacaggagaggaggggac
agggagagggagagaggggagaaggagagggacaggggaggagaaagggagaggcgacgg
tccaggagcagggaacgcaagggagagcggaaagacagggagaaagaaagggaggggggc
ggggagaacgacaaaagcaggaggaaaggcagtgacagagggagggagaggtccaaggac
aagaggagcaagggagagactgaggacaggagacacaaagaagagcgggatgagaggagg
gggcacagggaggagaggaaggccaagcgctccagtcggagcggaagcagggaaaggaga
cacaaggagaagtccaagaagagaggagaagtccaagaagagagtggaagcaagagcagg
gccgaggtgggggagaaggagaagagcaggaagagagagcgcagccatgagaggggggag
ggcgagcagcgctcacacaaacgcagccgcagcaaagagcggagccaccggccacgagag
cccagcaatgggaaagaccacgggaaacacagagagcgcaggagaagccagagcatggat
agaggagagaggacgacacagagcgctagggcagagtccccttag
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