Oncorhynchus mykiss (rainbow trout): 110530815
Help
Entry
110530815 CDS
T07259
Symbol
psmd1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1 isoform X1
KO
K03032
26S proteasome regulatory subunit N2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
110530815 (psmd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
omy03051
]
110530815 (psmd1)
Proteasome [BR:
omy03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
110530815 (psmd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT_EZ
Nop52
Zip
PA26
Tim54
Cnd1
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
110530815
NCBI-ProteinID:
XP_021469804
Ensembl:
ENSOMYG00000000934
LinkDB
All DBs
Position
1:9240119..9300065
Genome browser
AA seq
971 aa
AA seq
DB search
MITSAAGIISLLDEEEPQLKEFALHKLNSIVNDFWAEISGSVDKIEVLYEDETFRSRAFA
ALVASKVFYHLGAFDESLNYALGAGDLFNVTDDTEYVETIIAKCIDHYTKQRVENAELPE
DEEKKSIDPRLEGIVNKMFLRCLGDHKYKQAIGIALETRRLDIFEKTILESNDVSGLLAY
SLKVCMSLMQNKKFRNEVLRVLVKLYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKE
DNLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIPAVPGSTNTGTVPIPDKDSDAMET
DDKASSSPAGKAADSKDEPKDQNAKMIKILSGEMAIEFHLQFLIRNNNTDLMILKNTKDA
VRNSVCHTATVIANSFMHTGTTSDQFLRENLEWLARATNWAKFTATASLGVIHKGHEKEA
LQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLSQLKNASNDIVRHGGGL
GLGLAALGTARQDVYDLLKSNLYQDDAVTGEAAGLALGLVMLGSKSAQAIEDMVGYAQET
QHEKILRGLAVGIAMVMYGRMEEADTLIESLCRDKDPILRRSGMYTVGMAYCGSGNNKAI
RRLLHVAVSDVNDDVRRAAVESIGFIMFRTPEQCPSVVSLLSESYNPHVRCGAAMALGIC
CAGTGNKEAINLLEPMTNDPVNYVRQGALISSALIMIQQTEVTCPKVNQFRQLYSKVIND
KHDDVMAKFGAILAQGILDAGGRNVTISLQSRTGHTHMPSVVGLLVFTQFWFWFPLSHFL
SLAFTPTAIIGLNKDLKMPKVQYRSNCKPSTFAYPPALEVPKEKEKEKVSTAVLSITAKA
KKKEKEKEKKEKEEEKMEVVSEVQEAEKEKKDEEKEKEKEKEKEKKKEPEPNFQLMENPA
RVMPAQLKVLNMPETCRYQPFKPLHTGGIIIMKDTSEEEEELVEPVSAHGPKIEEEEQEP
EAPESFEYVDE
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgataacgtctgccgctggaatcatctcactgctggatgaggaggagccccaactcaag
gagtttgctctgcacaagctgaactccattgtcaatgacttctgggctgagatatcggga
tctgttgacaaaatcgaggtcctgtatgaagatgagacatttcggagcagggcgtttgct
gccttggtggcttccaaagtgttctaccacctcggggcgtttgatgagtcgttgaactac
gctctgggtgcaggagaccttttcaatgtcacagacgacactgaatatgtggagaccatt
atcgccaaatgcattgatcactacaccaagcagcgggtggagaacgccgagcttcctgag
gacgaggagaagaagagcatcgacccccggctggagggcatcgtcaacaagatgttcctg
cgttgcctgggcgaccataagtacaagcaggccatcggcattgccttggagactcgacgc
ctggacatcttcgagaagactatccttgaatcgaatgacgttagtggcctactggcctac
agcctgaaggtctgcatgtcactaatgcagaacaagaagttccgcaacgaggtcctccga
gtgctggtcaagctctacatgaatctggagaagcctgacttcatcaacgtttgccagtgc
ctgatcttcctggacgacccacaggcggtgagcgacatcctggagaagctggtgaaggaa
gacaacctgctgatggcctaccaaatctgcttcgacctgtacgagagtgccagccagcag
ttcctctcctccgtcatccagaacctgcgcaccgtgggcacgcccatccctgccgtgcct
ggctccaccaacacaggcactgtgcccatcccagacaaagacagtgacgctatggagacg
gacgacaaggccagcagctcccctgcaggaaaagctgcagacagtaaggatgagcctaag
gaccagaacgcgaagatgatcaaaattctcagtggagaaatggctatcgaatttcatctg
cagttcctcatccggaacaacaacacagacttaatgattctcaagaacacaaaggatgca
gtccgaaattcagtgtgtcacacagccacggtcatagccaactccttcatgcatacgggg
accacaagtgaccagttcctcagagagaacttggagtggcttgcaagagccaccaactgg
gccaagttcacagccacagccagtcttggcgtcattcacaagggtcacgagaaagaggca
ctgcagttgatggccacttatctgcccaaagacacctcacccggatcagcctaccaggag
ggaggtggcctgtatgccctcgggctaatccacgccaaccacgggggggacatcattgac
tacctgctcagtcagctcaagaacgccagcaacgacattgtccgtcacgggggaggtctg
ggcctgggattggctgctttgggtacagccaggcaggatgtgtacgatctgctcaagtct
aacctgtaccaggacgatgcagtcacaggcgaggcagcaggactggccctggggctcgtc
atgctgggctccaagtctgcccaggccatcgaggacatggtgggctacgcccaggagact
cagcacgagaagatcctgcgcggcctggccgtgggcatcgccatggtgatgtacggacgc
atggaggaggcagacacgctcatcgagagcctctgcagggacaaggaccccatcctgcgc
cgctccggaatgtacacagtgggcatggcctactgtggctccgggaacaacaaggccatc
agacgcctgctgcatgtggctgtaagcgacgtgaacgatgatgtcagaagggcagcggtg
gagtccattggattcatcatgttcaggaccccagagcaatgccccagtgtggtgtctctc
ctgtcagagagctacaacccccatgtgcgctgcggagccgccatggccttgggcatctgc
tgtgccgggacaggcaacaaggaggccatcaacctgctggaacctatgaccaacgaccca
gtgaactacgtgagacagggtgccctcatctcctctgccctcatcatgatccagcagacc
gaggtcacctgtcccaaggtgaaccagttccggcagctctactccaaggtcatcaacgac
aagcacgatgacgtcatggccaagttcggggccatcctggcccagggcatcctggatgca
ggtggtcgtaacgtcaccatctccctgcagtcgaggacgggccacacccacatgccgtca
gtggtgggcctgctggtgttcacccagttctggttctggttccccctctcccacttcctc
tccctggccttcacccccaccgccatcatcggactcaacaaggacctcaagatgcccaag
gtgcagtaccgctccaactgcaagccttccaccttcgcctaccctccggccctggaggta
cccaaggagaaagagaaggagaaggtgtctactgctgttctttccatcacagccaaagct
aagaagaaggagaaagagaaggagaagaaggagaaagaggaggagaagatggaagtagtg
agtgaggtacaggaggctgagaaagaaaagaaagatgaggagaaagagaaggagaaggag
aaggagaaggagaagaagaaagaacccgagcccaacttccagctgatggagaacccagcc
agagtgatgcccgcccagctcaaagtgctcaacatgcccgagacgtgccgctaccagccc
ttcaaaccgctgcacaccggcggcattatcatcatgaaggacaccagcgaggaagaggag
gagctggtggagcctgtctctgcccacggccccaagatcgaggaggaggaacaggagccc
gaggcccccgagtccttcgagtacgttgacgaatga
DBGET
integrated database retrieval system
