Oncorhynchus mykiss (rainbow trout): 110530973
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Entry
110530973 CDS
T07259
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110530973
04020 Calcium signaling pathway
110530973
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110530973
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
110530973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
110530973
NCBI-ProteinID:
XP_036841978
LinkDB
All DBs
Position
8:complement(70538104..70604602)
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AA seq
2193 aa
AA seq
DB search
MAKRLECTEPYFIGIFCFEFGIKLVALGFVFHKGSYLRNGWNIMDFIVVVSGILATAGAH
MNIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIG
LEFYSGKLHHTCLPTADILENETMDTTEVEFACGVRKCPEKYDCVGSWIGPNDGITQFDN
ILFAVLTVFQCITMEGWTAVLYNTNDALGFMWNWIYFIPLIIIGSFFVLNLVLGVLSGEF
AKERERVENRRAFMKLRRQQQVERELNGYRAWIDRAEEVMLAEENKKSGRSALDVLKRAT
SKNAKRRGGPGDAEISTIGAPRMRIRTVRRGPVAYMRRKERMLRISLRRMVKTDTFYWTV
LSLVFLNTICVAIVHHNQPDWLSTFLYYAEFVFLGLFLAEMFLKMYGLGFRLYFHSSFNC
FDCGVIVGSIFEVVWGFFRPGMSFGISVLRALRLLRIFKITKYWASLRNLVVSLMSSMKS
IISLLFLLFLFIVVFALLGMQLFGGRFIFEDYTPTNFDTFPAAIMTVFQILTGEDWNEVM
YNGIRSQGGVQYGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEEEEFF
NARYARGTDGPMSEYRRRRRPYLRRKKAIHRGRMAVPEEEEESTAGGGADQPPNGTNAFS
NRRDRRRRGGGGGRGGRSVWEQRANQLRKRRQMESQEVLFGGSPTEDTTDTPTTAYRAPT
LSPDASPGHLPESPMSGIMPMPEPPMSIAIPLPEPPDSEPVPLFTLAEERAVNHRPTGGE
RRHRVARKSRPGPGGAEEGGTARHRRHRHREARAEAKSRESPHEEVSESGSRERKILEER
EEKEEKDEKEVKGEFAEVEGGVSGKDEGGALIINLESEEEHLRVCIADIPEPPLCDNFPE
YLPPPLLEPPPQMEEGEVGETGQCEPLSLDRPVEPAPEQFADPSELQAAAGVSDSENNQA
SLNLEEGKESEQGPDSQTSVIIEMSGAQPLLEVTPMTALHSSKEVEMYHHERKEKKEEEE
SQVEKEEEEEASPPKPVPPGSMFLFKASNPIRRICHYVVTMRYFEMTILLVIVASSIALA
AEDPVCTNSDRNRVLRYFDYVFTGVFTFEMIIKMTDLGLLLHDGSYFRDLWNILDFIVVV
GALIAFALTNVIGNNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFN
ILIVYQLFMFIFAVIAVQLFKGKFFYCTDSSMDTEKECQGYYIDYARDKKEVKKREWKRH
EFHYDNVCWALLTLFTVSTGEGWPQVLQHSVDVTEEDMGPSRGNRMEMSIFYVVYFVVFP
FFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFTISAKPLTRYMPQNRQTFQYRL
WHFVASPSFEYTVMVMIALNTVVLMMKYYSAPAAYDTVLKHLNTAFTVLFSLECILKIMA
FGFVNYFRDTWNIFDFITVLGSITEIIVDLQSINTFNMSFLKLFRAARLIKLLRQGYTIR
ILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNDENHINQHNNFKTFSGALM
LLFRSATGESWQEIMLSCLGGQECEPDSSMAPMTMSPDHEGGCGTDFAYCYFVSFIFFSS
FLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWGEYDRAACGRIHYTAMYEMLTHM
SPPLGLGKKCPRGMAYKRLVLMNMPVDEDMSVHFTSTLMSLIRTALEIKIARGGEDRVAL
DTELQKEISVIWPYLPQKTLDVLVPINKDSDMTVGKIYASMMIMDYFKQNKAKKLRAQLE
AQKASLMPFQRLDASTLSDDILSNAQPLPCMPHSAGSALTRGGLVALSPLSPQDLLNMQP
MTSDTDTRSQHSRVSAGECSGLIPDPLELPFGRGLCVRASSMPRLAVEPQTEMAGGSMKR
SSSAVADQRVNGLRQEEKKSPDRLYRPRHKSYKAAVSRSERKRQLDTEKERGRSKERRHL
LSPDTSRCTSEERSLQPSRSPSRERTHPLDKQGNSSDSPLPTSESSTPSRRPLSQTSTRS
HPHISYSPLVCRTHPPSGDDDDDRGSPETQRRGEASRDRAGGEGQSGARGRRHQQGSPLR
RYPSEPYLALQEDEHSLDPTGFMETLTFEAAVATSLGRANTVSSTSSSSFSSARRGSRSS
WQVPNGHFRKRLAQTVSVAGCEPLSDTEEDDRC
NT seq
6582 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagactggagtgtactgagccttacttcattgggatcttctgttttgagttt
ggcatcaagcttgtggccctgggctttgtgttccataaaggctcctacctgaggaatgga
tggaatatcatggacttcatcgtggtggtcagcggaatcctggctacagcaggggcccac
atgaacatccccgtggacctgcggactctgagggcggtgcgagtcctgaggcctctcaaa
ctggtttctgggatccctagcttgcagatcgtgctgaagtccatcatgaaggccatggtg
cctcttctccagatcggcctgctcttgttcttcgccattctcatgttcgccatcatcggc
ctggagttctacagcgggaagctccaccacacctgtctacctacagctgacatcctggaa
aatgagacgatggatacgactgaggtggagtttgcgtgcggagtgaggaagtgtccagag
aagtacgactgtgtcgggtcatggatcggccccaatgacggcatcacccagtttgacaac
atcctgttcgctgtgctcactgtcttccagtgcatcaccatggagggatggacagctgtg
ctctacaataccaacgatgccttgggctttatgtggaactggatctactttattcctctc
atcatcatcggctctttcttcgtactcaacctggtgttgggagtcctctccggggagttt
gccaaagagagggagcgggtggagaaccgtagagccttcatgaagctgagacgccaacag
caggtagagagagaactcaacggatacagagcctggatagaccgagcagaggaggttatg
ctggctgaggagaacaagaagtcggggagatctgctttagatgtgctgaagcgggccacc
agtaagaatgcaaagcgtagaggaggtcctggggatgcggagatctccactataggagca
cctcgtatgcggatccgtacagtacggcgtggcccggtggcgtacatgcgtcgtaaggag
cgtatgctgcgtatctccctgcggcgcatggtgaagacagacaccttctactggactgtc
ctcagcctggtgtttctcaacaccatatgtgtggccattgtccaccataaccagccagac
tggctctccaccttcctgtactatgcagagtttgttttcctggggctcttcttggcagag
atgttcttaaagatgtacggcctgggattccgcctctatttccactcctccttcaactgc
ttcgactgcggagtgatagttggcagcatctttgaggtggtgtggggcttcttccggcct
ggcatgtcctttggcatcagcgtcctgagggcgctgagactcctgaggatctttaagatc
accaagtactgggcatcactgaggaacctggtggtgtctctcatgagttccatgaagtcc
atcattagtctgctctttctcctcttcctcttcattgttgtctttgccctgctgggcatg
cagctctttgggggcaggttcatctttgaagattacactcctaccaactttgacacgttt
ccagctgccatcatgacagtgttccagatcctgactggtgaggactggaatgaggtgatg
tacaatgggatccgctcacaaggaggagtgcagtacggaatgtggtcctccatatacttc
atagtgctcaccctgtttgggaactatacactgctcaacgtcttcttggccatcgctgtg
gataaccttgccaacgcacaggaactcaccaaggacgaagaggaggaagaggagtttttc
aatgcaagatacgccagaggcacagatggcccgatgtctgagtacaggaggaggaggcgg
ccctacctccgcaggaagaaggccatccacaggggccgtatggccgtccccgaggaggag
gaggagagcactgctgggggcggagccgaccaaccccccaatggcaccaatgccttctcc
aaccgccgtgaccgacggaggagggggggaggaggaggaagagggggaaggtccgtgtgg
gagcagagggccaaccagctacgcaagcggcgccagatggagagccaggaggtcctattc
ggaggcagccccaccgaggacaccactgacacccctaccaccgcctaccgtgctcccacc
ctctccccagacgccagccccggtcacctgcccgagtcgcccatgtccgggatcatgccc
atgcctgaacccccgatgtccatcgccatcccgctaccggaacccccagactcggagcct
gtgcctctgtttacgttagctgaggagagagcggtgaaccatcgccccaccggtggggaa
aggaggcacagggtggcccggaaatccagacctggccctgggggggcggaggagggaggg
acggcgcggcataggaggcaccgtcaccgtgaggcccgggctgaggccaagagcagagag
tcgccacatgaggaggtcagtgaatcaggcagccgcgagaggaagatattggaagagagg
gaggagaaggaggagaaagacgagaaggaggtcaaaggagagttcgctgaggtggaggga
ggagtgtcaggcaaggatgaaggaggagcccttattatcaacttagagagtgaagaagag
catctgagggtgtgtattgcagacatccctgagcctcccctatgtgataacttccctgag
tacctacccccacccctgctggaacctccaccgcagatggaggagggtgaggtgggggag
actgggcagtgtgagcctttgtccttggaccgtccagtggagccagccccagagcagttc
gcagacccctcagagctccaggcagcagcaggggtcagtgactcagagaacaaccaagcc
tccctgaaccttgaggagggtaaggagtctgagcaaggtccagacagccagaccagtgtg
atcatagagatgtctggagcacagccactgctggaggtcacccccatgacagctttacac
agcagcaaggaggtggagatgtaccatcatgagaggaaggagaagaaggaggaggaggag
tcgcaggtggagaaggaggaggaggaggaggctagcccgcccaaacctgtacctcctggc
agcatgttcctcttcaaggcctccaacccgatcaggaggatctgtcactatgtggtgacc
atgcgctactttgagatgaccatcttgctggtgattgtggctagcagcatcgctctggct
gctgaagaccctgtgtgcaccaactctgacagaaacagggttctccgttactttgattac
gtctttactggagtcttcacgtttgaaatgattataaagatgactgacctgggactgctt
cttcatgatggctcctacttccgtgatctgtggaacattctggacttcatcgtggtggtg
ggagctctaatcgccttcgctctgacgaatgtgattgggaacaacaaaggcagagacatc
aaaaccatcaagtccctcagggttctgagagtcctacgacctctgaagaccatcaagaga
ctccccaaactcaaggcggtgtttgactgtgtggtgacatctttgaagaacgtcttcaac
atcctcatcgtctaccagctcttcatgtttatcttcgctgtcatcgccgttcagctcttc
aagggaaagttcttttactgcactgacagctccatggacacagagaaggagtgccaaggt
tactacattgactatgctcgagacaagaaggaagtgaagaagagggagtggaagaggcat
gagttccactatgacaacgtgtgctgggctctgctcactctcttcactgtttcaactgga
gagggctggccgcaggttctgcagcactctgtggacgtgacagaggaggacatgggtcca
agtcggggcaacaggatggagatgtccatcttttacgttgtctactttgtggtcttccct
ttcttctttgtcaacatcttcgtcgctctcatcatcattaccttccaggaacagggtgat
aagatgatggaggagtgtagcttggagaagaacgagagggcatgcattgactttaccatc
agtgccaagcccctgacgcgctacatgccccagaacagacagaccttccagtaccgactg
tggcactttgtggcgtcaccatcgtttgagtacacagtgatggtcatgatcgccctcaac
actgtggtgctcatgatgaagtactactcagctccagcagcatatgacacggtactgaag
cacctgaacacggccttcactgttctcttctccctggagtgtatcctcaagatcatggcc
tttggttttgtgaactattttcgagacacttggaacatttttgacttcatcactgtgctc
ggcagcatcactgagatcattgtggatttacagtcaataaacacattcaatatgagtttc
ctgaagctgttccgggctgccagactgatcaaactgttgaggcagggctacaccatacga
atcctgctctggacctttgtacaatccttcaaggctcttccttatgtttgtctgctcatc
gccatgctgttcttcatctatgccatcattgggatgcaggtgtttggaaacatcaagctg
aacgatgaaaaccatatcaatcagcacaacaacttcaagaccttctccggtgcactgatg
cttctcttcaggagtgcgacgggggagtcatggcaggagatcatgctatcgtgtctgggg
gggcaggagtgtgagccagactcctccatggcacccatgaccatgtcccctgaccacgag
ggaggctgtggtactgactttgcctactgctactttgtctccttcatcttcttcagctct
ttcctgatgctgaatctgtttgtggctgtgatcatggataactttgagtatctgaccaga
gactcttccatcctgggtcctcatcacctggatgagtttgtccgtgtctggggagagtac
gaccgtgcagcatgtggccgtatacattacaccgccatgtatgagatgttgacccacatg
tctccacccctgggcctggggaagaaatgccccagaggtatggcctacaagaggctggtg
ttgatgaacatgccagtggatgaggacatgtcagtccacttcacctccaccttgatgtct
ctcatccgcaccgctctggagatcaagatcgcacgaggtggggaggaccgggtagctctg
gacactgagctacagaaggagatcagtgtgatatggccgtacctcccccagaagaccctg
gatgtactggtgcccatcaacaaagattctgacatgacagtaggtaagatatatgcctcc
atgatgatcatggactacttcaaacagaacaaagccaagaagctgagagcacagctggaa
gcacagaaggccagtctgatgccattccagcggctggatgcctcgaccctctctgatgac
attctgtccaatgctcagcccctgccctgcatgccccacagtgctggctccgccctgacc
agaggaggcctggtggcgttgagtcctctctccccccaggacctgctcaacatgcagccc
atgacctctgacacggacaccagaagccaacactccagggtgagtgcaggggagtgcagt
gggttgattcctgacccactggagctcccgtttggcagggggctgtgtgtacgggcctcc
tccatgcctcgtctggctgtagagccacagaccgagatggcaggtggctctatgaagcgg
tcctcgtccgctgtggctgaccagagggtgaatggcctgaggcaggaggagaagaaaagt
cctgatagactgtacagaccacgccacaagagctacaaggctgctgtgtcgcggtcagaa
aggaagaggcagttggatacggagaaggagcgcgggaggtctaaagagcgccgccacctc
ctctccccagacacgtcccgctgtacctccgaggagaggagcctgcaaccctcacgctcc
cctagccgtgagcgcacacaccccctggacaaacagggcaacagctccgacagccccctc
cccacctctgaatctagtacccctagccgccgccctctgtcccagacctcaacacgctcc
catccccacatctcctactctcctctggtgtgtcgcacgcaccctccctcaggggacgat
gatgacgacaggggcagcccagagactcagaggagaggggaagcctccagagaccgggca
gggggagagggacagagtggggcgaggggccgtcgccaccagcagggctctcccctgcgt
cgctacccgtcggagccctacctggccctgcaggaggacgagcacagtctggaccccacc
gggttcatggagacgctgactttcgaggcggcggtagccaccagcctgggacgtgctaac
acggtcagctccacatccagctccagcttcagctccgctcgacggggttccaggagcagc
tggcaggtccccaatggacacttccggaaacgcctggctcagacggtctctgttgcgggc
tgtgagccactcagcgacacagaagaggacgaccgctgctag
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