Oncorhynchus mykiss (rainbow trout): 110530993
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Entry
110530993 CDS
T07259
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110530993
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omy03310
]
110530993
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
110530993
Nuclear receptors [BR:
omy03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
110530993
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
110530993
NCBI-ProteinID:
XP_036842234
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Position
8:77863590..77884391
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AA seq
503 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYSEVQKHQKNQELLNQEVVNQGCLKQG
LSLTREDVAGGDSEGDRHRELSHSYSSGGSSSTLSDLDDIPDLFDLPLTPEEAHEYCSLE
LLGGHGGSTGNTSSSSSSSSSSNNSSNQNSPQQNLLDVTDANGIKHEYQMLSHTQAALLE
PLANDCTLMDIERITQSVVKSHLETSQYSSDDLKRLTYSGIQYSPEETRNFQCKSEEFMW
QQCAHHITNAIQYVVEFAKRITGFMDLCQNDQIILLKAGCLEVLLIRMCRAFNANTNTMF
FDGKFASAQLFKALGCDDLVSAVFDLAKGLCCLQLTDEEMALFSAAVLLSPERPWLTDSQ
KVRKLQEKLFLALQHSLHMSGASDEKLDQMVSKLLMMKSICNLHVNKLEFFRLVHPETAF
SFPPLYREVFGSEISLPDSTNSS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaagtaataccctgcaagatctgtggggacaagtcctcaggtatc
cactatggggtcattacctgcgaaggttgcaaggggttcttccgccgcagccagcagaac
aacgccatgtactcgtgttcccgccagagaaactgtcttattgaccgaaccaaccgcaac
cgctgccaacactgcagactgcagaagtgtctggctttgggcatgagccgggacgcggtg
aagtttggccgtatgtctaagaagcagcgagacagcctgtactctgaggttcagaagcac
cagaagaaccaggagcttctgaaccaggaggttgtgaaccaggggtgtctgaaacagggt
ttgtccctgaccagggaagatgtggcagggggagacagcgagggggacaggcacagggag
ctcagtcactcctacagcagcggcggctccagctccaccctgagtgacctggatgacatc
cccgacctgtttgacctgcccttgaccccggaggaggcccacgagtactgcagcctggag
ctgctgggaggccacggcggaagcaccgggaacacctcaagctcttcatcatcgtcatca
tcctctaacaattcgtccaatcagaactcgccgcagcagaatctgctggatgtcacagac
gccaatggaatcaaacatgagtaccagatgttgtcgcacacacaagccgcgctgctggag
ccactggccaatgactgcactctaatggatatagagcgtatcacccagagtgtggtcaag
tcccacttggagacgagtcagtacagttctgacgacctgaagaggctgacatacagtggg
attcagtactcacctgaggagacccgcaacttccagtgcaagtctgaagagtttatgtgg
cagcagtgtgcccaccacatcaccaatgccatccagtacgtggtggagtttgccaaacgc
atcactggcttcatggacctgtgtcagaacgaccagataattctgctcaaagcaggctgt
ctggaggtgctgttgatcaggatgtgcagggcgtttaacgctaacaccaacaccatgttc
tttgatggcaagtttgcctccgcccagctcttcaaagccctcggttgcgatgacctggtc
agtgccgtgtttgacttggctaaaggtctctgctgcctgcagctaactgatgaggaaatg
gctctgttcagcgccgctgtccttctgtccccagagcgaccatggctgaccgacagccag
aaggtccggaagctgcaggagaagctcttcctggctctgcaacacagtctgcacatgagc
ggggcctccgacgagaaactagaccagatggtgtccaagctgctgatgatgaagtccatc
tgtaatctccacgtcaacaagctggagttcttccgtctggttcaccccgagacagcattc
agcttcccaccactctatcgggaagtgttcgggagtgagatctctctacctgactctaca
aacagctcctag
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