Oncorhynchus mykiss (rainbow trout): 110531032
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Entry
110531032 CDS
T07259
Name
(RefSeq) guanine nucleotide exchange factor VAV3-like
KO
K05730
guanine nucleotide exchange factor VAV
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510
Focal adhesion
omy04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110531032
09142 Cell motility
04810 Regulation of actin cytoskeleton
110531032
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_2
SH3_1
CH
SH2
SH3_9
SOS1_NGEF_PH
C1_1
PH
RHG20_PH
CDC24
SH2_1
Cor1
Filamin
C1_2
DUF2935
ANC1_spectrin
Motif
Other DBs
NCBI-GeneID:
110531032
NCBI-ProteinID:
XP_036842513
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All DBs
Position
8:85793000..85881217
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AA seq
839 aa
AA seq
DB search
MKYWRQCALWLINCKVLPPTHRVTGDSAQVFDLAQTLRDGVLLCQLLNNLKPHTINLKEI
NLRPQMSQFLCLKNIRTFLTSCCEVFGMKKTDLFEAFDLFDVRDFGKVMDTLSMLSYSTV
AQQAGIKPFPTEESLKDEDIYSHLKDLIDENVLEDEEELYAPVYGLDDTDEGGEIYEDLM
RTEQHPTLKQAENVRSCCLSEIKQTEERYTETLESIEKYFLNPLKKFFTASEIDKVFVNI
PDLVKVHKSLMLEVQESILNKNALNLYQVFIAYKDRLLIYGIYCSHVEISITVLDFICKE
KEDVRLKLEECSKRANNGKFTLRDLLVVPMQRVLKYHLLLQELVKHTPDAADKNNLKTAL
DAMKDLAQYVNEVKRDKETLKEINQYQRSIENLNQPLESYGRPKGDGEVRMVSNVDKKKQ
DRHIFLFDGAVIVCKRRGDNYEMKDVIDLNYFKITNNPTQDRESKKWFYGFYLTHQQGQS
GFEFFFKTKELKKKWLDQFDMAISNIRPENSSNNFHQFRMHTFIRITTCSSCHLLLRGIF
NQGYLCLKCGLGAHKECLGRVGVCGRTDSAKLRPERAPTVRKQPDPGLPRMLVIRDYCGI
PSPQSAPPLTIHAGDIIELICADLHSSWWQGKILATSEIGSFPSDAVRPCPCVPKPVDYS
AQLWFAGPMERQEAAVKLMDRENSTYLIRHRTRESNEYAISIKFNDDVKHIKILTKNECF
YIAETRLFKTVLDLVDYYKQHSLREGFKSLDTTLQVPFREPSNGNSLPQGIRHTGTVFSP
RVVGIALARYDFSSRDTRELSLQEGDVVKIYTKMANGWWKGEVNGRVGWFPSTYVEEED
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgaagtactggcggcagtgcgcgttgtggctgataaactgcaaggtgcttcctccgacc
catcgggtaaccggggacagtgcccaggtatttgacttggctcagacgctccgggacggg
gtgctgctctgtcagctgctcaacaacttgaaaccccacaccatcaacctgaaggagatt
aaccttagaccacagatgtctcagttcctctgcttgaagaatatccggaccttcctgaca
tcctgctgtgaggtgtttgggatgaagaagactgatctgttcgaggcctttgatctgttt
gatgtccgggactttggaaaggtgatggatactctgtccatgctctcctactccacggtc
gcacaacaggcaggaatcaagccctttccaacagaggagagtctgaaagacgaggatatt
tacagtcatctgaaggacctgattgatgagaacgttctagaggatgaggaagagttgtat
gctccagtctacgggttggatgacaccgatgaaggaggagagatctatgaagacctgatg
aggaccgaacagcaccctacactgaagcaggctgagaatgtgagaagctgctgcctctca
gagatcaaacaaacagaggagagatacacagagaccctggagtctatagagaagtacttt
ttgaatccactgaagaaatttttcactgcgtcagaaatcgacaaggttttcgtcaacatc
cctgacctggtgaaagtccataagagtctgatgctggaggtgcaagagtccattctcaac
aagaacgccttaaacctctaccaggtcttcattgcctataaggacaggctactcatttat
ggaatctactgcagccacgttgagatatccatcacagtgttggactttatttgtaaggag
aaagaggacgtacgactaaagctagaggaatgttctaaaagagccaacaatgggaagttc
actctgagagatctactggtggttcccatgcagagagtcctcaagtaccatctcctacta
caggagctggtcaaacacacccccgacgcagccgacaagaacaacctgaagacggctctg
gacgccatgaaggacttggctcagtatgtcaacgaggtgaagagagacaaggagactctg
aaggagatcaaccagtatcaacgctccatcgagaacctgaaccagcccctggagagctac
ggacggcccaagggggacggagaggtccgaatggtgtctaatgttgacaagaagaaacag
gacagacatatcttcctgtttgacggggctgtgatcgtctgtaagagacgaggagacaac
tatgagatgaaggatgtgatcgatctcaactactttaagatcaccaacaaccccacccag
gatagagagagcaagaagtggttctatggtttctacctgacccatcagcaggggcagagc
ggctttgagttcttcttcaagaccaaggagctgaagaagaagtggctggaccagtttgac
atggcaatatccaacatcagaccagagaactccagtaacaacttccaccagttcaggatg
cataccttcatcagaatcactacctgtagctcctgtcacctgctcctcaggggtatcttc
aaccagggctatctctgtcttaagtgtggactcggagctcataaggaatgcctgggtaga
gtgggtgtctgtggaagaactgattctgccaagctgaggcctgagagggctccgacggtg
cggaaacaaccagacccaggtctccctaggatgctggtgatcagagactactgtggcatc
ccctctccccagagtgcccccccgttgaccatccatgctggggacatcatcgagctcatc
tgtgccgacctacacagctcctggtggcagggcaagatcttggcgacgagtgagattggt
tcctttcccagcgatgccgttaggccatgcccatgtgtacccaaaccagtggattattca
gcccagctgtggtttgcaggaccaatggagaggcaggaggcggcggtaaagctgatggac
agagagaacagcacctacctgatcagacaccggaccagagagtctaacgagtatgccatc
agtatcaagttcaacgatgacgtcaaacacatcaagatcctgacaaagaatgaatgcttt
tacatcgcagagaccaggctgtttaagactgtgttggacctggtagactactacaagcag
cattctctgagagagggcttcaagagtctggacacaacactgcaggtaccattcagggag
ccaagcaacgggaacagcctgccccaaggcatccgacacactggcactgtgttctctccc
agggtggtgggcatcgcgttggcacgctacgacttcagctccagagacaccagagagctg
tctctacaagagggagacgtggtcaagatctacaccaagatggctaacggctggtggaag
ggagaggtcaacggcagggtgggctggttcccttctacatatgtggaagaggaagactga
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