Oncorhynchus mykiss (rainbow trout): 110531035
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Entry
110531035 CDS
T07259
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04838
voltage-gated sodium channel type V alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
110531035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110531035
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
110531035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
110531035
NCBI-ProteinID:
XP_036842484
LinkDB
All DBs
Position
8:85002397..85107517
Genome browser
AA seq
2107 aa
AA seq
DB search
MAAMLLPTGPDGLRRFTRESLAAIEQRIAEEQAKNAKDYQEDLGNVELPMPRPDLEAGKQ
LPRIFGDIPPGLVGVPLDDIDPFYFKNQRTFIVVNKGTAIFRFSATSALYIFTPFTFLRR
ISIKVLVHSLFSLFIMCTILTNCCFMAMSDPAPWTKYLEYTFTGIYTFESMIKIFARGFC
VGPFTFLRDPWNWLDFSVISMAYLTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLADVMILTVFCLSVFALIGLQLFMGILRQKCVRSAAHCVNSSYNVNDTFTCNN
RTWSSMNDFVTNEDNFYKVEGAKDALICGYGQDAGKCPEGFDCLRIGRNPNYGYTSFDSF
GWAFLALFRLMTQDYWENLYHQTLRSAGKTYMVFFVLVIFLGSFYLVNLILAVVAMAYEE
QNQATIQEAWMKEREFQLAMEHVRREQRMAERRIQQETDSVMSPELSPFQLKVGSSLKRT
ASRRSRRMLSEDPEDESDEKFDPLDERVSPLPPTSPMPVHPLLAAMSSHPLSTRRGSQAS
IFSFRPCTTSDADFGDDEYSVHGDIMGRSRAGSTIGPNWQHKHKRTGSVRSHCSQVFTPS
LNINGRLNISLDQNGVTTVGLHTPTSLPACSMEKVKEDKEPTCLEESSAKPAQLSPETAE
PPLRRKRGLSSISFLSDAMDGEGTFRELEESRQKCPPCWYTFAKAYLIWDRCPWWLKVKE
YVKMIVMDPFLDLAITICIVLNTLFMALEHYPMTDEFNNVLSVGNLVFTVIFTAEMVFKL
IAMDPYFYFQQGWNMFDGIIVCLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNTL
IKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYQDCVCKISKDCMLPRWHMKDFFH
SFLIVFRVLCGEWIETMWDCMEVAGQPLCILVFMLVMVIGNLVVLNLFLALLLSSFSSDN
LSAPDEDGEMNNIQIAVARIHTGFAWLMRNVTDLFNGNLKKRRLMTKDVQISVRLTPVAN
HVESNGGVGVGVVGVIGRYGEKVPDDDSYMTNPNLTISVPIAPGESDVEFPEEGEVEEET
ESSEDEDNKAEKVSLSEGSTVDLRKPGEEEDDFSETADDVMEPDECFPEFCVRHCKCCEI
NTTRGLGQAWWRLRKTCYQIVEHSWFETFIIFMILLSSGALAFEDIYIEKRKVVKVILEY
ADKVFSYIFVLEMFLKWIAYGFKKYFTNAWCWLDFLIVDVSLVSLVANSLGYSDFAAIKS
LRTLRALRPLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFG
KCVNRTGFIHNASIVNNKSECLAMNDTQFYWTKVKVNFDNVGLGYLSLLQVATFKGWMEV
MHAAVDSRGVEEQPIREINLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKRKISGQD
IFMTDEQRKYYNAMKKIGSKKPEKPIPRPTNILQGFLFDLVSKQAFDIIIMMLIIVNMVT
MMVETDDQSARMESILNKINLIFIVIFTTECLMKIVALRCYFFTVGWNIFDFVVIILSIV
GIVLADIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSMPALFNIGLLL
FLVMFIYAIFGMANFAYVKKKEGIDDMFNFETFGNSMICLFQISTSAGWDNVLEPIMSNS
PEECEAYVVNTGTNVRGNCGNPSVAIAFCVSYIIISFLIVVNMYIAIILENFSVATEEST
EPLSEDDFEMFYEVWEKFDAEATQFIEFSKLSNFADNLSEPLRIAKPNKIKLISMDLPMV
SGDKIHCLDILFAFTKRVLGESGEMDALKQQMEEKFMMANPSKISHEPITTTLRRKQEDV
SAIIIQRCYRRHLLKRQMKQASFLYRQRNLQTNLNLQEHIVVDIERAPETEGLIAAMIKE
HYGPEGPDEEEELVGVMEGTLSSSPPSYDSVTRPGAASDVGQIERLERPGDLVLELREPS
PSQTNREPSTSQRYREPSTSQTYREPSTSQTYREPSTSQTYREPSTSQTYREPSTSQTYR
EPSTSQTYREPSTSQTYREPSTSETNRELSTSQTNRELSTTQTNRELSTTQTNRELSTSQ
TFEETFL
NT seq
6324 nt
NT seq
+upstream
nt +downstream
nt
atggcagccatgctgttaccaacgggtcctgatggcttgcgccggttcactcgcgaatcc
ctggccgccatcgagcagcggattgccgaggagcaggccaagaacgccaaggattaccag
gaggatctgggcaacgtggagctgcccatgcccaggcccgacctggaggccggaaaacaa
cttccacgcatctttggtgacattcccccaggactggttggggtacctctggatgacatc
gatcccttctacttcaagaatcagaggacttttatagtagttaacaaagggacggccatc
ttccggttcagtgccacgtctgctctctatatatttacccctttcaccttcctcagaaga
atctccatcaaagtcctggtccattcattattcagcttgttcatcatgtgtactattctg
accaactgttgcttcatggccatgtcggaccctgccccttggaccaagtacctggagtac
acgttcaccggtatctacacctttgagtccatgataaagatatttgcgagaggattctgc
gtcgggccgttcaccttcctgagagacccatggaactggctagattttagtgtaatctct
atggcatatctcacggagtttgtggatctgggaaacgtgtctgcgttgagaacattcagg
gtcctccgagcgctgaaaaccatctctgtcattccaggcctaaagaccatcgttggtgct
ctgatccagtcagtgaagaagcttgcggacgtgatgatcctgactgtgttctgcctgagc
gtgttcgccctcatcggcctgcagctcttcatgggcatcctgcggcagaagtgcgtccgt
agcgcggcacactgcgtcaactcctcatacaacgtcaacgacaccttcacctgcaacaac
aggacctggagctccatgaatgacttcgtcaccaatgaagataatttctacaaagttgaa
ggagcaaaggatgccttaatttgtggatatggacaagatgcagggaagtgtcctgaggga
tttgactgtctgagaataggaaggaaccctaactatggttataccagcttcgacagcttt
ggctgggctttcctggcgctgttccggctgatgacccaggactactgggagaacctctat
catcagactctgcgttcagcagggaaaacctacatggtcttctttgtgctggtcatcttt
ctgggttccttctacctggtcaacctgatcctggctgtggtggccatggcctacgaggaa
cagaaccaggccaccatccaggaggcctggatgaaggagagggagtttcagctggccatg
gaacatgtacgcagagaacagaggatggccgagagaagaatccagcaggagacagactcg
gtcatgtctccagagctgtcaccgtttcaactaaaagtgggcagtagtttgaaacggaca
gccagtagaagatctcgcaggatgctgtccgaggatccagaggacgaatcagacgagaag
tttgatccactggacgagcgggtgtcccccctgcctcccacgtctcccatgcccgtccac
cctctcctggctgccatgtcgtcccaccctctcagcactcgccgtggcagccaggccagt
atcttctccttcagaccctgtaccacctctgatgccgacttcggggatgacgagtacagt
gttcacggggacatcatggggaggagcagggcaggctccaccatcggccccaactggcaa
cacaagcacaaaaggacaggcagcgtgaggagccattgctcccaggtcttcacccccagt
ctcaacatcaacggacgtctcaacatctccctggaccagaacggcgtcaccactgtcggc
ctgcacacccccacctccctccccgcctgcagcatggagaaggtcaaagaagataaagag
cccacctgtttagaagagtccagtgccaagccagcccagctctcccccgagactgcagag
cctcccctccgtcggaaacgcggtctgagctccattagcttcctcagcgatgccatggat
ggtgagggtaccttcagagagctggaggagtctcgtcagaagtgccccccgtgctggtac
acttttgccaaggcgtacctgatctgggacaggtgcccgtggtggctgaaggtaaaggag
tatgtgaagatgattgtgatggatcccttcctagacctggcaataaccatctgtatcgtc
ctcaacaccctcttcatggccctggaacactaccccatgaccgacgagttcaacaatgtg
ctctctgttggcaatctggtgttcacggtgatcttcacagcagagatggtgttcaagctg
atagccatggatccatacttttacttccagcagggctggaacatgtttgacggcatcatc
gtctgtctcagcctcatggagctgggcctgtccaacgtagagggactgtctgtcctgcgc
tccttcagactgttgcgagtgttcaagctagcgaagtcatggcccaccctgaacacactg
atcaagatcatcggtaactccgtgggcgctctgggaaacctgaccctggtgctggccatt
atcgtcttcatcttcgcggtggtgggcatgcaactgttcggcaagaactaccaggactgc
gtttgtaagatctctaaggattgtatgttaccccgctggcacatgaaggacttcttccac
tcgttcctcatcgtgttccgggtgctgtgcggcgagtggatcgagaccatgtgggattgc
atggaggtggcagggcagcctctctgcatcctagtcttcatgctggtcatggtcatagga
aacctggtggtgctgaacctgttcttggccctgctgctcagctcgttcagctcagacaac
ctgtcggctcccgacgaggacggagagatgaacaacatccagatcgccgtcgcccgcatc
cacacggggttcgcctggctgatgaggaacgtcaccgatctattcaacggaaacctgaag
aagagacgtctcatgactaaagacgttcagatttctgtgaggctgacacccgtagcgaat
cacgtggagagtaacggtggggtgggggtcggggtggtgggggtgatcggacgctacgga
gagaaggtcccggacgacgacagctacatgaccaaccccaacctgaccatcagtgtgccc
atcgctccaggggagtcggacgtggagttccctgaggaaggagaggtggaggaggagacg
gagtcgtcagaggacgaggacaacaaagcggaaaaagtgagcctatcagaaggcagcacg
gtggacttgcggaagccaggggaggaagaggatgacttctctgagacggctgacgatgtt
atggagccagatgaatgtttccctgaattctgtgttcgccactgtaagtgctgtgagatc
aacacgacacggggcctgggtcaggcctggtggagactgaggaagacctgttaccagatt
gttgaacacagctggttcgagacttttattatcttcatgatcctgctgagcagtggtgct
ctggcatttgaggacatctacattgagaaaaggaaagtggtgaaggtaatcttggagtac
gctgataaggtcttctcctacatattcgtcctagagatgttcctcaaatggattgcctac
ggcttcaagaagtacttcaccaacgcttggtgttggctggacttcctcattgtcgatgtg
tcgttggtgagcctggtagctaactctctgggctactctgactttgctgccatcaaatca
ctgaggactctccgagcgctgaggcccctaagggccctgtccagattcgagggaatgcgg
gtggtggtgaacgcactgattggagccatcccatccatcatgaacgtcctgctggtctgc
ctcatcttctggctcatcttcagcatcatgggagtcaacctgttcgcagggaagtttggt
aaatgtgtgaaccggacagggttcatccacaatgcttccatcgtcaacaacaagtcagag
tgcctggccatgaacgacactcagttttattggactaaagtcaaggtcaacttcgacaac
gtgggattaggatacctctcactgctgcaagtggccacgtttaaaggatggatggaagtt
atgcacgcagctgttgattcacgtggcgtagaggagcagccaatcagggagatcaacctc
tacatgtacctttactttgtcatcttcatcatcttcggatccttcttcactctcaacctc
ttcatcggcgtcatcattgataatttcaaccagcaaaaaagaaagataagtggacaagac
attttcatgactgacgagcagcggaagtactacaacgctatgaagaaaataggctctaaa
aagcccgaaaagcctataccaagacctacgaatatcctccaaggcttcttatttgacctg
gtatccaagcaagcctttgacatcatcattatgatgctgatcatcgtcaacatggtgacc
atgatggtggagacagacgatcagtccgcacgcatggagtccattctcaacaagatcaac
ctgattttcattgtcatcttcaccaccgaatgcctcatgaagatcgtggcacttcgttgc
tatttcttcaccgtgggatggaacatctttgactttgtggttatcatcctctccatcgtt
ggtatcgttctggctgacatcattgagaagtactttgtatctccgactctgttccgtgtc
atcagactggcaaggataggacgcgtacttcgactaatacgtggggccaaaggaataagg
actttactgtttgccttaatgatgtccatgccagcgttgttcaacatcggcctcctgctc
ttcctcgtaatgttcatatacgctatcttcggaatggccaacttcgcttacgtgaaaaaa
aaggaagggatagatgacatgttcaactttgagacctttgggaatagtatgatctgcctg
ttccagatcagcacttccgccgggtgggacaacgtcctggagcccatcatgtctaactcc
ccagaggagtgtgaagcctacgtcgtcaacaccggcaccaatgtccgaggaaactgcggc
aacccgtctgtggcaatcgccttctgtgtcagctacatcatcatatcgttcctcatcgtg
gtcaacatgtacatcgccatcatcctggagaacttcagcgtggccaccgaggagagcacc
gagccgctgagtgaggacgacttcgagatgttttacgaggtgtgggagaagttcgatgca
gaggccacccagttcatagagttctccaagctgtcgaatttcgcagacaacctgtcggaa
cccctgcgcatcgccaagcctaacaaaatcaagctgatctctatggacctgccgatggtg
agcggggacaagatccactgcctggacatcctgttcgccttcaccaaacgtgtgctgggc
gagtcgggcgagatggacgccctcaagcagcagatggaggagaagttcatgatggccaac
ccgtccaagatctcccacgaaccaatcactacgaccctacgccgcaagcaggaagacgtg
tctgccatcatcatccagcgctgttacagacgccacctgttgaaacggcagatgaaacag
gcctcattcctttacagacagaggaaccttcagaccaacctgaacttgcaggagcacata
gtggtggacatagagagggccccggagacggagggcctcatcgccgccatgataaaggaa
cactacggccccgaggggcccgacgaggaggaggagctggtaggggtcatggaagggact
ctgtcctcctcaccgccatcttacgacagtgtgacccggccgggggcggctagtgacgtt
ggtcagatagaacggctagaaaggccgggagacttagtgttagaactcagggaacctagc
ccctcacaaacaaatagggaaccgagcacctcacaaagatatagggaacctagcacctca
caaacatatagggaacctagcacctcacaaacatatagggaacctagcacctcacaaaca
tatagggaacctagcacctcacaaacatatagggaacctagcacctcacaaacatatagg
gaacctagcacctcacaaacatatagggaacctagcacctcacaaacatatagggaacct
agcacctcagaaacaaatagggaacttagcacctcacaaacaaatagggaacttagcacc
acacaaacaaatagggaacttagcaccacacaaacaaatagggaacttagcacctcacaa
acatttgaagagacatttctttga
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