Oncorhynchus mykiss (rainbow trout): 110531272
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Entry
110531272 CDS
T07259
Name
(RefSeq) sortilin
KO
K12388
sortilin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110531272
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
110531272
NCBI-ProteinID:
XP_036844826
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Position
9:complement(71985134..72035813)
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AA seq
818 aa
AA seq
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MGILTRCVLLFLFQHLTSAYDFKEELDNGQYAFVKDPSLNIEKRSADVELFQFDSESSEH
IRSRRSADQGDCKSLQGFDTKLTNNTHTYSFNDLSGSVSLAWVGDATGVILALTTFQVPF
FMLRFAQSKLYRSENYGKSFQDVTNLINNTFIRTEFGIAIGPENSGKVILTGDVSGSLGS
RIFISRDFGNSFEQQDLPFNPLMQITYNPRDANVLLVIGNTNELWLSEDFGENWRKIHDM
VCLFKWGMDSNIFFTTSLNGSCNDRGMLDLRRTTDYGKTIKTVATKIFSFGLGGKFLFAS
VMTGTGTLRRIHVSTNQGEDWNMAQLPPVGHEEFYSILAANEDMVFMHVDEPGDTGYGSI
YVSDDRGTVYSKSLERHLYTTTGGDTDFTNVTSLRGVFITSILAEDGSVQSVVSFDQGGE
WVPLQKPANTKCDSTAKDPDKCSLHIHAAYSAAMKLNVPMLPLSEPNAVGLIMAHGSVGD
AISVMKPDVFVSDDGGYTWLQALEGPHHYAILDSGGLLVAVEHSAQLIKDIKFSTDEGQC
WHVHQFTSDPIHFTGLAVEPGARSMNVSVWGYRDSLLSQYWVSVTVDFRELLTRTCEDQD
YVQWLAHSDDISDPNDGCMLGYKEKLLRLRKASVCWNGRDYEVNKQPTPCLCTLDDFLCD
FGYYRKENSSECVEQPDLKGHLLEFCLQGKEELLQTRGYRKIPGDKCEGGKQPERKEIDL
SKRCVSDLLGPQERLIDGHLSSSAPIIVTVLIIVLLAIIAGVLIVKKYVCGGRFLVHSYS
VLQQHAEAQGLDEPLDSNYTQTRNMADFHDDSDEDLLE
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgggaattctaacgcgctgtgttttactttttttattccagcatttgacgtccgcttat
gattttaaagaagaactagacaacggacagtatgcatttgtgaaagatcctagtttgaat
atcgaaaagagatctgcagatgtagaattattccagtttgactctgaatcatccgaacac
attcggagcaggagaagcgctgatcaaggggactgtaaaagtctccagggattcgacacc
aagttgactaacaacacccacacctactccttcaatgacctgagtgggtccgtgtcactg
gcctgggttggagacgccaccggggtcatcctggctttgacaacattccaggttccattc
ttcatgttgagattcgcccagtccaaactctatcgaagtgagaactatgggaagtcgttc
caggacgtcacaaacctcatcaacaacactttcatcaggacagagttcgggatcgccatc
ggaccagagaactctgggaaggtgatcctgacaggtgatgtgtctggcagcctgggatct
cgtatctttatctccagagactttgggaacagctttgagcagcaggaccttcccttcaac
cccctgatgcagatcacatacaaccccagagacgccaacgttctcctggttatcggcaac
actaacgagctctggctgtcagaggactttggagagaactggaggaagatccatgacatg
gtgtgtctgttcaaatgggggatggacagtaacatattcttcaccaccagcctcaatgga
tcctgcaatgacagagggatgctggacttgaggaggacgacggactatgggaagaccatc
aagactgttgccactaagatcttctctttcggcctgggggggaagtttctgtttgcctct
gttatgactggaactggaactctgaggaggatccatgtgtcgactaaccagggggaggac
tggaacatggctcagctgcctccggttggccacgaggagttctattccatcctggcagcc
aatgaggacatggtgttcatgcacgtggacgaaccaggagacacaggctatggcagcatc
tacgtgtcagacgacaggggtacagtgtactctaagtctctggagcgtcacctctacacc
accacagggggagacactgacttcaccaacgttacctctctacgaggggtcttcatcacc
agtatactggcagaggatggctcggtgcagtccgtggtgtccttcgaccagggaggggaa
tgggtgcccctgcagaagcctgccaacaccaagtgtgactccacagccaaagaccccgac
aagtgcagtctccacatccacgcagcttacagcgcggctatgaagctgaacgtccccatg
ctgcctctcagtgaaccaaacgctgtaggactcatcatggctcacgggagtgtgggcgat
gccatctctgtgatgaagcctgacgtattcgtgtcagatgatggaggttacacctggcta
caggccctggagggacctcaccactatgccatccttgactctggtggactcctggtggcc
gtggagcactctgctcagctcatcaaagacatcaagttttccacagacgagggccagtgc
tggcacgttcaccagttcaccagcgatcccatccacttcacagggctggcggtggagccg
ggggcgaggtctatgaacgtcagtgtctggggctacagagactctctgctcagtcagtat
tgggtatctgtcaccgtcgacttccgagagctgctcactagaacctgtgaggaccaggac
tacgtgcagtggctggcgcactctgatgacatcagcgaccctaacgacggctgtatgctg
ggttacaaggagaagttactgcgtctgaggaaggcctcggtctgctggaacggacgggac
tatgaggtcaacaaacaacccaccccctgcctctgcaccctggatgacttcctgtgtgac
tttgggtactatcgtaaagagaacagctctgagtgtgtggagcagccggacctgaagggc
caccttctggagttctgtctgcaaggcaaggaggagctgctgcagaccagaggctatagg
aagatccccggggataagtgtgagggaggaaaacagccggagagaaaagagatcgacctc
agtaagaggtgtgtcagtgatctgctgggacctcaggaacgactgatagacggccatctg
tccagctctgcacccatcatagtgactgttttaatcattgtgctgctcgcaatcatagct
ggggtcctcatcgtcaagaagtatgtctgtggtggcaggttcctggtacacagctactct
gtcctacagcagcatgctgaggcccagggactagacgaacccctagacagcaactacact
cagaccagaaacatggccgacttccacgacgattcagacgaggatcttctggagtaa
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