Oncorhynchus mykiss (rainbow trout): 110531395
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Entry
110531395 CDS
T07259
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04020
Calcium signaling pathway
omy04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
110531395
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110531395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110531395
Ion channels [BR:
omy04040
]
Ligand-gated channels
Glutamate (ionotropic)
110531395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
110531395
NCBI-ProteinID:
XP_021470265
Ensembl:
ENSOMYG00000000641
LinkDB
All DBs
Position
1:complement(16181514..16295527)
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AA seq
1149 aa
AA seq
DB search
MNLIFSRLLAYFYFGFQVILQFYIDPCHLHPQPCHILAQIGNTVRLGALLPTRQTARVQA
ALNRALAGLAQTGDNFLPFNLSLEVVPQEPAKGDPESLFRCVCQAIVVQGVSAVLAFPQT
QEEIVQVEFMASFLEIPFISIIEYGEPLKTQNRFHLQMVTRIPPSGLSELLLAVLQRSGW
QERMAVLCQGWEEDGLLELLDLQSHLGCGANRWQLRALLNLTRAGPAESQIQDFLSEHFR
GQGPSQIPPPAAVLLFGGDPECAAAVLRSAQDLGLTLPTVHWMLGYPLSPDALHSIGLPL
GLLAYGEVERKPLDFYIRDALQLVGRAVSAATVVRPDLALIQNMVNCYDKPNKHEVPSSG
QYLARFLSNTSFSGLTGPVSVQRNLSRVLTSQRFHIWSLQRDAVGQPTWVTVGSWEGGHL
EVEDQGLWQGHNGKGHGRGEGQGRRGGGRWRAGSPVAGSRVRVVTLVEHPFVFTREVDED
GNCPAGQYCLDAGTNSSDMLERYFSERATGNSTFLPTDYGKCCYGYCIDLLEKMSEDMRF
EYDLYIVGDGKYGASKSGRWTGLVGDLLNGVADMAVTSFSINSVRSRVIDFTSPFFSTSL
GILVRSKDTAAPIGAFMWPLHWSMWVGIFVALHITALFLTLYEWKSPFGMTPHGRNRLRV
FSYSSALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKT
FEELSGIHDAKLHHPSHGFRFGTVRESSAEEYMKKSFPEMHEYMRRYNEPTTPDGVSTLK
VDPPQLDAFIMDKALLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQNSPLTNNVSEFISR
YKSDGYMDMLHDKWYKVVPCGKRVFAVTETLQMGIRHFSGLFVLLCVGVATSLLTLAGEH
AFYHMVLPHIRRRQKYKYWLHTSQKIHRALNQTYEDVKKKQGANTEKSCNNQKNQHPQPP
PDPPSPGASAKWNESSTDSTAAAAKDKRVHFNLETLNSRRLLARAVAESEGGRGGSAGCD
TNPRTNPATRVCANGGFGTSFASLVQSLPSSSSSSGVPLRPGELQELQERIDLIRDQLRT
ALARRAELQTSLAKEKAACSAPIVTGMTSVVVATAALPSSRCATTMTDPVLKSLPTVHTI
PPIHTNEKS
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaatcttctcaagattattggcatacttttacttcggattccaagtgattcta
cagttctacatcgacccttgtcacctccatccccagccgtgtcacattctggcgcagata
ggaaacaccgtgcgccttggtgcccttctgcccacccgccagacggccagggtgcaggct
gccctgaaccgcgccctcgccggtctcgctcaaactggggacaactttctacctttcaac
ctgagcctggaagtggttccccaagagccagcaaaaggagaccccgagtcccttttcagg
tgtgtttgtcaggctatcgttgttcagggggtctccgctgtgctcgccttcccccagacc
caggaagagatcgtacaagtggaatttatggcttcatttttggaaataccttttataagc
atcattgaatacggagagcctctgaaaacacagaaccgcttccacctacagatggttact
cggatccccccgtcgggcctgtcggagctgctgctggccgtcctccagcggagcggctgg
caggagcgcatggccgtgctgtgccagggttgggaggaggatggcctgctggaactactg
gacctccagagccacctgggctgtggtgcaaaccgttggcaactccgcgccctcctcaac
ctcacccgtgctggcccagcagaatcccaaatccaggacttcctttcagaacacttccgg
gggcagggcccaagtcagatcccaccaccggccgcggtgctgctgtttgggggcgaccca
gagtgtgccgcggcggtgctgcggagcgcccaggacttggggctgacgctgcccacggtg
cactggatgctgggctacccactgagccccgacgccctgcactccatcggcctgcccctg
ggtctgctggcctacggtgaagtggagcgcaagccgctggacttctacatccgcgacgcg
ctgcagctggtgggccgggcagtgtcagcggccacagtggtgcgcccagacctggcgctc
atccagaacatggtcaactgctacgacaaacccaacaaacacgaggtgccctcctccgga
cagtaccttgccaggttcctgtccaacacgtcgttctcagggctgacggggccggtgtcg
gtgcagaggaacctatcccgagttctcacctctcagcgattccacatctggagcctgcag
cgggacgcggtgggccagcccacctgggtgacagtgggcagctgggaggggggccatctg
gaggtggaggaccagggcctgtggcaagggcacaatggcaagggccatggccggggggag
ggccaggggaggcggggcgggggccggtggcgagccggcagtcctgtggcaggcagccgg
gtgcgggtagtcaccctagtggagcaccccttcgtattcacgcgggaggtggatgaggac
gggaactgtccggcaggacagtattgcctggacgcggggacaaacagctcggacatgctg
gagcgctacttcagtgagcgtgccacgggaaactctaccttcctgcccacggactacggc
aagtgttgttacggatactgcatagacctgctggagaaaatgtcagaggacatgcgcttc
gagtacgacctgtacatcgtgggcgacgggaagtacggtgcatcgaaaagcggccgctgg
actgggctggtgggtgacctgctcaatggcgtggccgacatggccgtcacctcattcagc
attaactcagtacgcagccgtgtcatcgacttcacctcgcccttcttctccacctcgctg
ggcatcctggtgcgtagcaaggacacggcggcgcccatcggcgccttcatgtggcccctg
cactggtctatgtgggtgggcatctttgtggcgctgcatatcaccgccctcttcctcacc
ctctatgagtggaagagcccgtttggcatgacgccacacggacgcaaccgtctgcgcgtc
ttctcctactcgtctgcgctcaacctctgctacgccatcttgtttggccgcacggtctcc
agcaagacgcccaagtgctggacgggtcggtttctgatgaacctgtgggccatcttctgc
ctgttggtgctgtccagctacacagccaacctggccgccgtcatggtcggcgagaagacc
ttcgaggagctatcggggatccacgacgccaagctccatcacccatcccatggtttcagg
tttggcacggtgagggagagcagcgctgaggagtacatgaagaagagtttcccagagatg
cacgagtacatgaggcgctacaatgagcccaccacacccgatggagtgtccaccctcaag
gtagatccccctcagcttgatgccttcatcatggacaaggccctgctggactacgaggtg
tccatcgacgcagactgcaagctgctcactgtgggcaagcccttcgccatcgaaggctat
ggaataggcctcccacagaactcccctctaaccaacaacgtgtcagagttcatcagtcgc
tacaagtcagacggctacatggacatgctgcacgacaagtggtacaaggtggtgccttgt
gggaagagggtgttcgccgtcaccgagactctccagatgggcatccgtcacttctcaggg
ctgtttgtgctgctgtgtgtgggtgtggccacgtcactgctcaccctggctggggagcac
gccttctatcacatggtgctgccacacatccgacgacgacagaagtacaagtactggctc
cacactagccagaaaatccaccgagccctgaaccagacctatgaggatgtgaagaagaag
cagggagccaacacagaaaaaagctgcaacaaccagaagaaccagcacccccagcctccc
ccagaccccccttcccccggcgcctcggccaagtggaacgagagcagcacggactccact
gctgcagccgctaaagacaagcgagtccactttaacctggagaccctcaacagccgccgc
cttctagcccgggccgtggccgagtctgaaggggggaggggggggtcggctggatgtgac
actaaccctaggaccaacccggccacacgggtctgtgcaaatgggggcttcgggacttcc
tttgccagtctggtgcaatccctcccctcctcttcttcctcctcaggcgttcctttgagg
ccgggagagctgcaggagctgcaggagaggatcgacctgatccgggatcagctgaggacg
gctctggccaggagggctgagctgcagacttccctggccaaggaaaaagctgcctgctcc
gcccccatagtgacaggaatgacctccgtggttgtagctactgcagccctcccctcctcc
cgctgtgccaccaccatgacagaccctgtcctcaagtccctgcccacagtccacaccatc
cctcccatacacaccaatgagaagagctga
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