Oncorhynchus mykiss (rainbow trout): 110531475
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Entry
110531475 CDS
T07259
Symbol
sox19b
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110531475 (sox19b)
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110531475 (sox19b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
110531475
NCBI-ProteinID:
XP_021470355
Ensembl:
ENSOMYG00000002816
UniProt:
A0A060Y9Z2
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All DBs
Position
9:complement(12436340..12441768)
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AA seq
299 aa
AA seq
DB search
MYSMMEHELKPSGQQQQQHHHQTAQGMSPVTGNIGNSHLGSKPVCPPGGDPMDKVKRPMN
AFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHMKDYP
DYKYKPRRKTKPLLKKDNQMAKYPLSAGNLLAAAAAQGQGGSARMESYGWGPAGGYAGMQ
NEALGYTQQLHRYDLSALQYPQAMTAAQTYMNGANTYSPMSYSSSTQQPSPVMSMVKPEP
VSHSPTGGPNHHRGPLQGDLRDMISMYIPGGDASDPAAQRGGYSVQQHYLSGTVPLSHI
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatggaacacgagctgaagccttctgggcaacaacaacagcagcaccac
caccaaacggcccagggcatgtccccggtcactggaaacattggcaactctcacctgggg
tccaaacccgtgtgccctccgggcggggacccaatggacaaggtcaaaaggcccatgaat
gccttcatggtgtggtccaggggccagcgccgcaagatggcccaggagaacccgaagatg
cacaattctgagatcagcaagcggcttggcgcggagtggaagctgctgaccgacgccgag
aagcggccgttcatcgacgaagccaagcgcctcagggcagtgcacatgaaggattatccc
gactacaagtacaagccacggcgcaagaccaagcccctgctcaagaaggacaaccagatg
gcgaagtaccctctctccgccgggaacctgctggctgcagcggccgcgcagggccaaggt
gggagcgccagaatggagagctacgggtggggcccggcgggaggttacgctgggatgcag
aacgaggccctcggctacactcagcagctgcaccgctatgacctgtccgccctccagtat
ccccaggccatgactgcagcacagacgtatatgaatggagccaacacctacagccccatg
tcctacagcagcagcacccagcagcccagcccggtcatgtccatggtgaagccagagcca
gtatcacactccccgactggtggacctaaccaccaccgcgggcctctccaaggggacctg
agagatatgatcagtatgtacatccccgggggggacgccagtgacccggccgcccagaga
ggaggctacagtgtccagcaacactatctcagtgggaccgttcccctcagtcatatctag
DBGET
integrated database retrieval system
