Oncorhynchus mykiss (rainbow trout): 110531486
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Entry
110531486 CDS
T07259
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04814
Motor proteins
omy05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
110531486
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110531486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110531486
03036 Chromosome and associated proteins [BR:
omy03036
]
110531486
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110531486
Membrane trafficking [BR:
omy04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110531486
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
110531486
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
110531486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
ATG16
Motif
Other DBs
NCBI-GeneID:
110531486
NCBI-ProteinID:
XP_036843257
Ensembl:
ENSOMYG00000005273
UniProt:
A0A8C7VCR3
LinkDB
All DBs
Position
9:12638041..12675811
Genome browser
AA seq
1270 aa
AA seq
DB search
MSADGGGKPAKVGSVVEVIGKGQRGTVAYVGATLFATGKWVGVILDEPKGKNDGTVQGKR
YFQCDENCGIFVRQSQIQLVEDGATSPDIPESSTAKFLSKQKDIPEIPKSVKQTPVSKKS
VTRRSTKWNTPGRLSSSSSLPSLLMAPRAIGLSSSRSREDVSEGSLSSKGALGAPVVPLP
SGIPATSGAPPPATPSKAEPPASKQEEESLRGQVKDLEEKLETLKMKRAEDKVKLKELEK
HKIQLEQLQEWKTKMQEQQTDLQKQLKEAKKDAREALEAKDRYMEEMSDTADAIEMATLD
KEMAEERSESLQVEVESLKEKVEELTMDLEIIKHEVEEKGSDGAASSYHVKQLEEQNSRL
KDALVRMRDLSSSEKQEHVKLQKQMEKKNGELETLRTQKEKLQEEMKQAEATIDELKEQV
DAALGAEEMVETLTERNLDLEEKVRELRETVTDLEAINEMNDELQENSRETEMELREQLD
LNGARVREAQKRVEAAQETVADYQQTINKYRQLTASLQDANKELTSAQNANAEQVQPPPP
AELFDFKIKFAETKAYAKAIEMELRKMEVGQANRQVSLLTSFMPDSFLRHGGDHDCILVL
LLIPRLICKAELISKQAQEKFDLNGNPVERTGVKMRGPPGEQLSFASGLVYSLTLLQATL
HKYQQALNCCSVQVYTQMGTLYSEMSVHERSLDFFIDLLHKDQLDETVHVEPLTKAIKYY
QQLYSIHLAEQTEDCTVQLADHIKFIQSALDCIGAEVVRLRAFLQPGQEGLALNILLKDL
DTTCSDIKQFCKKIRRRMPGTDVPGVPAALSFGAPVSETLTDCRRQLTRVVAVLQEVAAA
GAQMVAPLGEQEGLNALKLDDVAVKAVEQVYGSQGLNPHECLRQSCSAVISTMNKMATAM
QEGEYDAERPQGKAPPVEARAAALRAEITDAEGLGVKLEDRDTVIKELKKSLKIKGEELS
EAHVRLSLLEKKLDTSTKDADERVEKIQTKLDETLALLKKKEKEFEETMDALQADIDQLE
AEKAELKQRLSSQSKSTIEGLRAPPASGIASIVTGSAGAALAPGAGGLSGPMQVVDSPLL
RQQVEAQRLGIKHLKNENNRLKAEKMRAQLASLPPLHVPKLHLREATSSSSPPAEGTLHG
ILYRKTEQLLGTLLKMTATVKVVDITGKTPVSASAQLLDQTARLQSLSDALDKLKGEVAE
HVVSQQPGAKVSSDFATFPISSFVKAKEEKQGGTVFVGRVAIPCAKGQEQVHRLVLSQQH
LQQVHRLLIA
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggacgggggaggcaagcctgccaaggtgggctcggtggtggaggtgatcggt
aagggccagcgtggcacggtggcgtatgtgggcgccacgctctttgccacgggtaagtgg
gtgggtgtgatcctggacgagcccaagggcaagaatgatggcacggtccaggggaagaga
tacttccagtgtgatgagaactgcggcatctttgtgcgccagtcccagatccagctagtg
gaagatggtgccacctctccagacatcccagaatcttccactgccaagttcctgtccaag
cagaaagacatccctgagattccaaaatcagtcaaacagacgcccgtttccaagaagtcc
gtcacccgtcgtagcaccaagtggaacactccaggtcgtctctcctcctccagctccctc
ccctccctcctcatggctccccgggccatcggcttgtccagctctcggtccagggaggat
gtcagcgagggtagcctgtcttccaagggtgcgctgggggctcctgtcgtccccctgccc
agcggcatccccgccacgtccggagctccaccccccgccacccctagcaaggctgagcct
cctgcatcaaagcaggaggaagagtctctgcgtggccaggtgaaggacctagaggagaag
ctggagaccctgaagatgaagcgggcggaggacaaggtcaagctgaaggagctggagaaa
cacaagattcagctggagcagctccaggagtggaagaccaagatgcaggagcagcagacg
gacctgcagaaacaactcaaagaggccaagaaggatgcccgggaggcattggaggccaag
gaccgctatatggaggagatgtcagacacggcggacgccatcgagatggccaccctggac
aaggagatggccgaggagcggtccgaaagcctgcaggtggaggtggagtcgctgaaggag
aaggtggaggaactcaccatggacctggagatcattaaacatgaggttgaggagaaaggt
tctgacggagctgcctctagttaccacgtaaagcagctggaggagcagaacagcaggctg
aaagatgctctggtcaggatgcgtgacctgtcgtcgtctgagaagcaggagcacgtgaag
ctgcagaagcagatggagaagaagaatggagagctggagactctgaggacccagaaggag
aaactacaggaggagatgaagcaggctgaggccaccattgatgagttgaaggagcaggtg
gatgctgctctcggggcagaggagatggtagagactctaactgagaggaatctggacctg
gaggagaaagtcagagagctgagagagacagtcactgacctggaagcgatcaacgagatg
aatgacgagcttcaggagaacagccgagagacagagatggagctgagggagcagttggac
ctgaacggggccagggtgagagaggcccagaagagagtggaggctgctcaggagactgta
gcagactaccagcagaccatcaacaagtaccgccagctcactgccagcctgcaggatgcc
aacaaggaactgaccagtgctcagaatgccaacgcagagcaggtccagcctcctccacca
gctgagttgtttgacttcaagatcaagttcgctgagaccaaggcctacgccaaggccata
gagatggagctgaggaagatggaggtgggccaggccaacagacaggtgtctctcctcaca
tccttcatgcccgactccttcctgcgtcacggtggagaccacgactgtatcctggtgctg
ctgctcataccaagactcatctgcaaggctgagttgatcagtaagcaggcccaggagaag
tttgatctgaacggtaaccccgtggagaggactggggtgaagatgagaggaccacctgga
gagcagctcagcttcgcttcaggactggtctactctctcaccctgctgcaggccacgctg
cacaaataccaacaagctctgaactgctgcagtgtgcaggtgtatacgcagatggggact
ctctactcagagatgagtgtccatgagcgttccctcgacttcttcattgacctgctgcac
aaagaccagctggatgagactgtacacgtggagcctctcaccaaggccatcaagtactac
cagcaactgtacagcatccacctagctgagcagactgaagactgcaccgtgcagctggct
gatcacatcaagttcatccagagtgcgttggactgtatcggtgctgaggtggtgcgtctc
agggctttcctgcagccgggacaggaggggctggctctgaacatccttctgaaggacctg
gacaccacgtgcagtgacatcaaacagttctgtaagaagatcagacgcaggatgccaggg
accgatgtaccaggggtgccagctgctctgtcttttggagctccggtgtcggagacgctg
acggactgcaggcgtcagctgacgcgggtggttgccgtgctacaggaggtggctgcggcg
ggggcacagatggtcgctcctctcggggagcaggaggggctcaacgctctaaaactggat
gatgtggccgtcaaggcagttgaacaggtgtatgggtcccaaggtctaaacccccatgag
tgtctgcgtcagtcctgcagcgctgtcatctccaccatgaacaagatggccactgccatg
caggagggagagtatgatgctgagagaccacagggaaaggctcccccagtagaggctcgt
gcagcagcactcagggcagagatcactgatgcagagggcctgggagtcaaactggaagac
agagacactgtcatcaaggagctcaagaagtcacttaagatcaagggagaggagttgagt
gaagcccacgtccgtctcagtctcctggagaagaagctggacacgtcgactaaagacgca
gacgaacgtgtggagaagatccagaccaaactggatgagaccctggccctgctcaagaag
aaagagaaggagtttgaggagaccatggacgccctgcaggcagacatcgaccagctggag
gcagagaaggcggagctgaagcagcgtctctccagccaatcgaagagcaccatcgagggc
ctcagggccccgcctgcctcgggcatcgcctccattgtcacgggatccgccggagccgct
cttgccccgggagcagggggtctgtctgggcccatgcaggtggtggactcccctctcctc
cgccagcaggtggaggctcagagactgggtatcaaacacctgaagaacgagaacaacaga
ctcaaggcagagaagatgagagcccagttagcctctctccctcccctccacgtccccaag
ttacacctgagagaggccacctcttcttcctctccccctgctgaggggactctccacggg
attctctacaggaagacggagcagctcctagggaccctgctcaagatgaccgccacagtt
aaagtggtcgacatcaccgggaagacaccagtgagtgctagtgctcagctcttggaccag
acggctcggctgcagagcctgagtgacgccctggacaagctgaagggtgaagtggcagag
cacgtggtttctcagcagcctggggcaaaggtctcctctgactttgccacctttcccatt
tcctctttcgtcaaggcgaaggaggagaagcagggaggcacggtgtttgtaggccgcgtg
gccatcccgtgtgccaagggccaggagcaggtgcaccgtcttgtcctatcacagcaacac
ctgcagcaagtgcaccgcctcctcatagcctaa
DBGET
integrated database retrieval system