Oncorhynchus mykiss (rainbow trout): 110531576
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Entry
110531576 CDS
T07259
Symbol
sec31b
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110531576 (sec31b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110531576 (sec31b)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
omy02044
]
110531576 (sec31b)
Membrane trafficking [BR:
omy04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110531576 (sec31b)
Secretion system [BR:
omy02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
110531576 (sec31b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40
Beta-prop_TEP1_2nd
WDR55
TPR_Sec16
Beta-prop_EML
Beta-prop_EIPR1
EIF3I
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
MIOS_WD40
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Prp18
Motif
Other DBs
NCBI-GeneID:
110531576
NCBI-ProteinID:
XP_036815732
LinkDB
All DBs
Position
23:7999800..8023021
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AA seq
1289 aa
AA seq
DB search
MRLKEIQRTAHPAWSPAPHHPICLALGTSAQQLDASFNTTAALEIFQVDFADPSLGMKLK
GSLPTSNRLHSLVWVNFGEGEDGLGGRLIGGSDNGTVTVYSPEAIVTSGAEAIIGQSDKH
TGPVRALDFNPFQSNLLASGANDSEIYIWDLNNFSNPMTPGTKSQLCEPPEDISVVSWNR
QVQHILASANPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPEVATQLVLASEDDRM
PVIQMWDLRFATSPLKVLENHTRGLLSIAWSQADPELLLSSAKDNRILCWNPNTGEVIYE
LPTTNQWCFDIQWCPRNPALLSAASFDGWISVYSVMGGSLEAQQQSRADQSLCGAFPQIS
SSFDTMDPFGTGQVLPPLQVPQPTPQTTLVAPLKKPPKWVRRPVGASFAFGGKLITFESP
KAPVQSPQPVPVPRQVFVSQVTTETELLQRSRELQAALRSGSLSDYCQAKIHKAPTDSEQ
DIWRFLLVNFEDEARVKFLRLLGFSKEDLERKISTCLGKNLQPNGHGVDANDLAEKIQLL
STQRSEESGDEVDSTKTPGSSSPSDFFSQIPPQPQDKEKKISFPIPVSADADGLISQALL
VGNFEGAVDLCLNEGRYAEAILLAISGGQELLQKTQQTYLEKQRNSISMLISSVVTQNWG
DIVQSCALDNWKEALAALLTYAHPKEFAHLCETLGSRLEGERTEKRCLQACLCYICSGNI
EKLVECWALQRDCSSPLVLEDLVEKMMVLRKSVERLRNSEVAVQSPILADKLTHYAGLLA
SQGSLATALSYLPDTSDQACIMMMRDRLFHAQGEGGAAGGQQPPPCPYNRVRVTGGDPAP
AQAPAVPVQAQPPTQTPGPYQPPLPVMSVGGQPPPPVMSVGGQPPMTTVFTPQAAALSRG
PPPPSYGGLPPSSPAPPPSGLPRTGLRPAYPQHPATAPGFSPLQPFQPQQQPMSAGLGGP
GLSAFPPGPAMPGSSLSGHPLPPFSAPGGLPTMPSPGPPPSGFTPTSLPSGPMPLSYQQP
GAPVGMYPPGGSHLHSQGPPAGPPSGPYPPLGPGYPQGGPGAPAVKSFSAPSVAPPPTGY
FPWLSTPLVDDDEGQDGWNDPPAVRGGSRKKKVVPDNYTPPAPITAPVMGGFPMEGHHHQ
PQGQQGHDPSRTQQFPPGAPQEPSVQLLQALPAERVEQREIPAEHMVLKQTFDSLVQRCQ
LAAQDPQTKRKLDDASKRLGYLYDKLREHSLSNNILGGLHEISRCVAGQNYQRGLEVHTA
VVTSSNFSEIQAFMPILKVVMTIANKLGV
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgaaagagatccagaggactgctcatccagcatggagccctgccccccaccac
cctatctgcctggctttaggcacgtcagctcagcagctggatgcgtcattcaacaccact
gccgccttggaaatattccaggtggattttgccgatccttccctgggcatgaagctcaag
gggtccctacctacttctaacaggctccatagtctggtgtgggtgaactttggagaagga
gaagacggtttgggagggagactgattggaggcagtgataatggcacggtaacggtgtat
agcccggaagccatcgtaacatcaggggcagaggcaataataggacagtctgacaaacac
actgggcctgtcagagcactagacttcaacccctttcagagtaatctgttggcatcaggg
gcaaacgattcagagatctacatctgggatttgaacaatttcagcaatccaatgacaccc
gggacaaagtcacagctttgtgagcctcctgaagatatcagtgtagtgtcgtggaacaga
caggtgcaacacatcctggcctctgcaaaccccagtgggaaagcagtggtctgggacctg
aggaagaacgagcccatcatcaagattagtgaccacagcaaccggatgcactgttcaggg
atgctctggcaccccgaggtggccacccagttggtcctggcctcagaagatgaccgcatg
ccagtcattcagatgtgggacctgcgctttgccacgtcccctctcaaagtcctggagaac
cacacaaggggacttctgtccatagcgtggagccaagcagacccggagctgttgctcagt
agtgctaaagacaacaggatcctctgctggaacccaaacactggagaggtgatctatgag
ttaccaacgaccaatcagtggtgctttgacatccagtggtgtcccaggaacccagcgctg
ctgtcggccgcctcgtttgacggctggatcagtgtttacagcgtgatgggaggaagcctg
gaggcccagcagcagagcagggctgatcagtctttgtgtggtgctttcccacagatctcc
tcgtcctttgacaccatggatccgtttgggacaggccaggtgctgccccctctgcaagtt
ccccaacccacccctcagaccaccctcgtcgctccgctgaagaagccccccaagtgggtt
cgcaggcccgtaggagcctcattcgcttttggtgggaagctgatcacctttgagagtcct
aaggctccagtccagagcccacagcccgtccctgtccccaggcaggtgtttgtgagccag
gtcaccacggaaacagagctcctccaacgttccagagagctgcaggctgctctgcgatct
ggatccttgtcagactactgccaggccaagatccacaaggcccccacagactctgaacag
gacatatggaggtttctcctggtcaactttgaagatgaagcccgggtcaaattcctgaga
cttttgggtttcagcaaagaggatttagagaggaagatatccacctgcttggggaagaac
ctgcagcctaacggacacggagtggatgccaacgatctggctgagaagatacagcttctc
tctactcagaggtcagaagaatccggggatgaggttgactccaccaagactccgggttca
tcctcgccctctgactttttcagtcagatcccaccacaaccacaagacaaggagaagaag
atcagcttcccgatccctgtctcagcagatgcagatggtctgatcagccaggctctgctg
gtgggaaactttgagggagcggtggacctgtgtctgaacgaggggcgctacgctgaggcc
atcctgctggcgatcagtggaggacaggagctactgcagaagacccagcagacatacctg
gagaagcagaggaacagcatctctatgctgatctcatccgtggtgacccagaactgggga
gacatcgtgcagagctgtgccttggataactggaaggaggctctcgctgcactcctaacc
tacgctcaccccaaagagtttgctcatctgtgtgagaccctggggtcgcgtctggagggg
gagaggacagagaaacgctgtctgcaggcatgtctctgttacatttgctctgggaacatt
gagaaactagtggaatgctgggccctgcagagggactgctcatctcccctggttttagag
gacttggtagagaagatgatggttctgcgtaagtctgtggagcgtctgaggaacagcgag
gtggctgtacagagtcctatcctggctgacaagctgactcactacgctggtctcctagct
tcacaaggcagcctggctacagccctgtcctacctgccagacacctcagaccaggcttgc
atcatgatgatgagagaccggctgttccacgcccagggagagggaggagctgcagggggg
caacagcccccaccgtgcccttacaacagagtcagggtgactgggggcgaccctgcccct
gctcaggcccctgctgtccccgtccaagcacaaccaccaacacagacaccggggccctac
cagcctcctcttcctgtgatgtcagtgggtggccagcctcctcctcctgtgatgtcagtg
ggtggccagcctcctatgacgacagtcttcactcctcaagctgctgctctctccagaggg
ccgcctcctccttcgtatggcggtctgccaccctcctcccctgctcctccaccgagtggg
ctgccacgtacaggactacggccagcctaccctcaacatcctgccactgccccagggttc
tctccacttcagccattccagccacaacagcagcccatgtctgcaggactaggtggcccc
ggcctctctgcctttcctccaggacctgctatgccaggctccagcctatctggacacccc
ctgcctccgttctctgcccctggcggcctccccaccatgcccagcccagggccacctccg
tcaggcttcacccccacctcgctcccttcaggccccatgccactcagctaccagcagcct
ggggcccccgtcggcatgtacccaccaggggggtctcaccttcacagccagggcccacct
gcaggtcccccttctggtccgtacccacccctgggacctgggtacccacaaggaggtcct
ggagccccggccgtcaagtccttctctgctccgtcggttgctcctcctcctacagggtac
ttcccttggctgagtactccccttgttgacgatgatgaaggacaagatggctggaacgac
ccaccagcagtacgagggggttctaggaagaaaaaggttgtcccagacaactacacccct
ccggctcccatcaccgcccctgttatggggggtttccccatggagggccatcatcatcag
ccccaaggacagcagggccacgaccccagccgcacgcagcagttccccccaggggcccct
caggagcccagcgtacagctcctccaggcgctgccggctgagagggtggagcagagagag
atccctgcagagcacatggtcctcaagcagaccttcgacagcctggttcaacgctgccag
ctagccgcacaagacccacaaacaaagaggaaacttgacgatgcatcgaaacgccttggg
tacctgtatgacaagctgagagagcattcgctgtctaacaacatcctggggggtttacat
gagatcagccgctgtgtggcgggccagaactaccagcgtggcctggaggtccacactgct
gtggtcaccagcagcaacttcagcgagatccaagccttcatgcccatcctcaaagtggtc
atgaccatcgccaacaagctgggcgtctga
DBGET
integrated database retrieval system
