Oncorhynchus mykiss (rainbow trout): 110531733
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Entry
110531733 CDS
T07259
Name
(RefSeq) multiple PDZ domain protein isoform X1
KO
K06095
multiple PDZ domain protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110531733
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
L27_1
Shufflon_N
Motif
Other DBs
NCBI-GeneID:
110531733
NCBI-ProteinID:
XP_036843452
LinkDB
All DBs
Position
9:21292701..21355731
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AA seq
2070 aa
AA seq
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MIETMDTQRALQAVERLQAKLKDRGEVPTEEKLSLLKSVLQSPLFHQILALQKSVQLLKD
QGGVTSTLSDDLSECYTSAQANGGHLAYPEASTSTQVNGKQSPEDFEHIIRSMAQGRYVT
RMELVKPLSGGLGFSVVGLRSENRGELGIFVQEIQPGSVAHCDGKLKESDQILAINGQPL
DQTVTHQQAIGILQRASECVQLTIARGPIPQLASPVVSRTPSAASTLSAHSSAAHWNHVE
TMELVNDGTGLGFGIVGGKTTGVIVKTILPGGIADQDGHLRSGDHILKIGDTDLYGMGSE
QVAQVLRQCGNRVKLVITRGPPEETAIVPMVLPTVTEQQGYEEEEAEAFDVGLTKNAQGL
GITIAGYVGDKNSEPSGIFVKSITKDSAVEQDGRIHVGDQIIAVDGNNIQGYTNQQAVEV
LRHTSQTVHLKLIRRGFRPEDIPPAVVPSVLVVSPTPGGRDTTLERTDVVDATTQGKKQC
QALSEESDVTNVKDQLTEKTRDEAKLTEDEELELKKKWQETLGPSKEVVVAQVEKFSESS
GLGISLDANSGHHYIRSVLLEGPVGRCGKLFSGDELLEVNGISLIGETHKEVVSILKELP
VCVYMACCRPAPLLKSDRDSGQLGLDEFATEPIMKIQGDLGSFLVFEGSEGVATRENVTD
ETLGAPLAMWETEIQDIELEKGESGLGFSILDYQDPMDPAKTVIVIRSLVSEGVAEQDGR
LLPGDRLMFVNSTNLDNASLEDAVQALKGANIGTVHIGVAKPLPIDSNEVDLTDERVLAH
RFSGEEDDTFQASMIALHGSNCSADLSYQMILQSSTPKRSARLDLLTEHPFVTLSCLADD
TEPFSPEEKPIAFPLPRSIGSHTLMIDNNTLAISDQYLAHQLTQLEPSDLSNSCSPYTDP
EPGLNDLGEPMQSLRFPVEPTMAVADIGEMECLMKGDEPSVKQSKEEGDKIRTTGSNFER
TITVVKGNSSLGMTVSAVKDGLGMHIRSIIHGGSISRDGRLGVGDLILAINGEPTANLTN
TQARAMLRRHSLIGPDMGSACAPEDDLCPFYVITYVPMEYLEEYKASLEQPKDDIFSDAP
QAPKREIPELPEREEGEGEESELQSATFSNWNQPRKVELKKEAGKSLGISIVGGRGMGSR
LSNGEVMRGIFIKHILEDSPAGRDGTLKTGDRVVEVDGVDLRDASHEQAVEAIRRAGNPV
VFLVQSIVHRPRKAPLPFLLRLNTHPGSNPRPTNQTSAGLLFPASPLQSSTTDTNEERAA
AMARRNSDKEVESHSRLFLRLSPTNPFTPTPFKPLKREAGKTSSTTPHLSLPVVPHVGET
DTDTLTEIPDRQAQAEDEDEFGYSWKSIIQRYGSLPGLLHMIELEKGKTGLGLSLAGNRD
RSRLSVFVVGIDPCGAAVKDGRIVVGDELLEINGQILYGRSHQNASSIIKSAPSKVKIIF
IRNTDALNQMAVGPVREHGDTLEPQTELETCTSIAPSAIDVDMFKYVQHVILPKEEGGFG
ITFSEEDPTNGVVIQSITEKGPAGKDGSIKSGDKLLAVEDEPVVGYTVERVHSLLGNAKG
SVKLTICANESLPLPPYYTDQATSIPSIYMANLGQPESEPIRSSSRSSTPGTLASSDPVT
CPIIPGCETTIDISKGHTGLGLSIVGGCDTLLGTIIIHEVYEEGAASKDGRLWAGDQILE
VNGIDLRVATHDEAINVLRQTPQRVRLSVFRDEAQYKEEDLWDAFTVELNKKPGQGLGLS
IVGRRNDTGVFVSDIVKGGVVESDGRLMQGDQILSVNKEDVRNATQESVAALLKCGVGPI
VMEVGRFKAGPFHSERRFSQSSQISETGSCKVTPHSLSASSGSLQMDCDSVQHTTLDHQE
IRIVEFTKGLTDSLGISIAGGVGSPLGDVPIFIAMMNPTGLAAQTHKLKIGDMIVSICGT
ATEGMSHSQAVTLLKNATGTIELQVVAGRDTTVTGPSQEQTAAGLSVSSLTATSIFHDDL
GPPQYKTITLARGPDGLGFSIVGGFGSPHGDLPIYVKTVFGKGAASEDGRLKRGDQIMAV
NGQSLEGVTHEEAVGILKRTKGTIALTVLS
NT seq
6213 nt
NT seq
+upstream
nt +downstream
nt
atgattgagacaatggatacccagcgtgccttgcaggcagtggagcgtctccaggccaag
ctgaaggaccggggggaggtccccaccgaggagaagctcagcctgctcaagtcagttctc
cagagccccctgttccaccagattcttgccctgcagaagtctgtccagctcctcaaagac
cagggtggtgtcacatcaacacttagcgatgacctgagtgaatgctacacatcagcccag
gccaatggtggccatcttgcctacccagaagcctccactagtacacaggtcaatgggaag
caatcgcctgaggattttgagcacatcattcgctccatggctcaggggcgctacgtgacg
cgcatggagctggtgaagccactgtctgggggtctgggcttcagcgtggttggcctgagg
agcgagaaccgcggggagctgggcatcttcgtccaggagatccagcccgggagcgtggcc
cactgcgatgggaagctgaaggagtcagaccagatcttggccatcaacggtcaacccctg
gaccagacagtgacccaccagcaggccataggcatcctgcagagagcatctgagtgcgtg
cagctcactatagccagaggacccattcctcagctggccagccccgtggtgtcccgtacc
ccctccgctgccagcaccctgtctgcccactccagtgcggcccactggaatcatgtggag
accatggagctggtcaacgacgggacgggcctgggctttggcattgtgggaggaaagacc
accggtgtcattgtcaaaaccatcctgcctggaggcatcgctgatcaggatgggcatctg
cgcagtggggaccacatcctcaagattggggacactgacctatatggcatgggaagtgag
caggtggctcaggtcctgaggcagtgtggtaaccgagtgaagttggtcatcaccagaggc
cctccagaggaaaccgccatcgtcccaatggtgttgcccacggtcacagagcaacaggga
tacgaggaagaggaggccgaagcgttcgacgttgggctgaccaagaacgcccagggtctg
ggaatcaccatcgccggctatgtgggggacaaaaattctgagccctctggtattttcgtg
aaaagtataactaaggacagtgcggtagagcaagacggccggatccatgttggggaccag
atcatagctgtggacggtaataacatccagggctacaccaaccagcaggccgtggaggtg
ctgagacacacgagccagacagttcacctgaagctgatcaggcgaggcttccgtccagag
gatatcccacccgctgtggtgcccagtgtgctcgtagtctcaccaaccccagggggcaga
gacacgacactggagaggacggatgttgtggacgccaccactcaaggtaagaaacagtgc
caggcattgagtgaggaatctgatgtcaccaacgtgaaggatcagttaactgagaagacc
agagacgaagcaaagctaacagaggatgaggagttagagctgaagaagaagtggcaggag
actctcggccccagcaaggaagtagtggttgcccaagtggagaagttcagtgagagcagt
ggtctgggaatcagtctggatgccaacagcgggcaccactacatccgctccgtcctgctg
gaggggccagtgggacgctgtgggaaactcttcagtggggacgaactgctcgaagttaat
ggaatatccctgattggtgagacccacaaggaagtggtgagcattctgaaggagctgcct
gtctgtgtctacatggcctgctgtaggcccgcccctctcctgaagagtgacagggattct
ggccaactggggttggatgaatttgctactgaacctataatgaagatacagggagacctc
ggcagtttcctggttttcgaaggttccgagggggtggcgacgagggaaaatgtaacggat
gagacactcggagctcctttggccatgtgggagacagagatacaggacattgagctggag
aagggtgagagcggactgggattcagcatcttggactaccaggacccaatggatcctgcc
aagactgtgattgtgattcgctctctggtgtctgaaggagtggcagaacaggatggcagg
ctattgccaggtgaccggctcatgttcgtcaacagcaccaacctggacaacgccagtctg
gaggacgctgtccaggcattgaagggggctaacatcggcacggtccacattggggtggcc
aaaccactacctattgactccaatgaggtagacctgaccgacgagagggtgttggcgcat
cgcttctctggcgaggaggatgacaccttccaggcatccatgattgccctccatggcagc
aactgcagcgctgacctgtcctaccagatgatcttgcagtcctccacacccaagcggagt
gctcgtctggacttgttgaccgaacatcccttcgtgacgttgtcctgcctcgcagacgac
actgaacccttttccccggaggagaagcccatcgctttccccctgcccaggagtattgga
agtcacaccctaatgattgacaacaacacactagctatctccgatcagtacctggcgcat
caattaacccaattggagccgtcagatctgtcgaactcgtgcagtccgtacactgacccc
gagcccggtttgaatgatttgggggagccaatgcagtctcttcgttttccggtggagccc
accatggccgttgcagacataggggagatggaatgcttaatgaagggggatgagccatct
gtaaagcagtccaaagaggaaggggacaagattagaaccactgggagtaattttgaaagg
acaatcactgttgtcaagggcaactccagtctcggaatgacggtgagcgccgtcaaggat
ggcttggggatgcacatccgcagcatcatccacggaggctccatcagccgagacggccgt
ctgggggtgggggacctcatcctggccatcaacggcgagcccacggccaacctgaccaat
acacaggcccgcgccatgctccggagacactccctcatcgggccagacatgggatctgct
tgtgcaccagaggacgatctgtgccccttttatgtcatcacctatgttcccatggagtat
ctggaggagtacaaggccagcctggagcagcctaaagatgacatcttctctgatgctcct
caggccccaaaaagagaaatcccagaactcccagagagggaggaaggagagggagaggag
agcgagctacagagtgccaccttcagtaactggaaccagcccaggaaggtggagctcaaa
aaagaagctggcaagtcccttggcatcagcatcgtggggggcagaggaatgggcagtcgc
ctcagcaacggcgaggtgatgcggggcatcttcatcaaacacatcctggaggacagcccc
gccggccgcgacggaaccctgaagacaggagacagggttgttgaggtggatggcgtggac
ttgagagatgccagtcacgagcaggctgtggaggccatccgcagggcaggaaaccctgtc
gtgttcctcgtgcagagtatcgtccacaggcccaggaaggcgcccctaccctttcttctg
cggctaaacacccaccccggatccaacccacgacccactaatcaaacctctgccggctta
ttatttcctgcctctccgcttcagtcctcaaccacggacaccaacgaggagagagcggcg
gccatggcacggcgcaatagtgacaaggaggttgagagtcacagtagactattcctacgc
ctctccccaactaaccctttcactcctactccgtttaagccactaaagagggaagcggga
aagacatcgtccaccactcctcacctctcgcttcccgtggttccccacgtcggagagacc
gacaccgataccctgacagagattcccgacagacaggcccaggcggaagacgaggatgag
tttggctacagctggaagagcatcattcagcgctacggcagccttccggggctgctgcac
atgattgagctggagaaggggaagaccggcctgggccttagtctggctggcaaccgcgac
cgctctcgcctgagcgtgtttgtggtcgggatcgacccctgtggcgccgccgtcaaagat
ggtcgcattgtggttggggatgaactgttggagatcaacgggcagattctgtatgggcgg
agtcaccagaatgcctcctccatcatcaaaagcgctccgtcgaaggtcaagatcattttc
atcaggaacacagatgctctgaaccagatggctgtaggaccagtgagggaacatggagac
accctggagccccagacggagctggaaacatgtacttccattgcaccctcggcgatcgat
gtcgacatgttcaagtatgtgcagcacgtcattctgccgaaggaggagggtggattcggc
atcactttcagtgaggaagaccccacgaacggggtggtgattcagagtataactgaaaaa
ggaccagccggaaaggacggcagcatcaaatctggagataaactcctggctgtggaggat
gaaccagtggtgggctacactgtggagagggtccactctctactggggaacgccaaaggc
tccgtgaagttgacaatctgcgcgaatgagtcattgcccctccccccctactataccgat
caggccaccagcatccctagcatctacatggctaacctgggccagcctgagtcagagcca
atcaggagctcaagtcgctcgtccacccctggcactctggcctcctctgaccctgtgacc
tgtcccatcatccccggctgtgagaccaccatagacatctccaaaggccacacgggcctg
ggcctcagcatcgtggggggctgtgacactctattggggaccattatcattcacgaggtc
tatgaggagggagctgcctccaaggatgggagactttgggctggggaccagatcctggag
gtgaatggcattgacctgcgcgtggccactcacgacgaagctatcaacgtgctacggcag
acccctcagcgggtgcgtctgagcgtgttcagggatgaggcccagtacaaggaggaggac
ctgtgggatgcctttaccgtggagctgaacaagaagcccggccagggcctgggcctcagc
atcgtggggagaaggaacgacacaggggtgtttgtgtcggacatagtgaaagggggcgtg
gtggagagtgacgggaggctgatgcagggagaccagatcctgtccgtcaacaaggaggat
gtcagaaacgccacccaggagtcagtggcagcactgctgaagtgtggtgtgggacccata
gtgatggaggtgggcagatttaaagccggacccttccactctgagagaaggttctcacag
agcagtcagataagtgaaacgggcagctgcaaggtgacccctcactcgctgtcagcctcc
tctggtagcctccagatggactgtgacagcgtacaacatacaacactggaccaccaggag
atcagaattgttgaattcacaaagggtctcactgattcgttgggcatcagtattgcgggt
ggagtgggcagtcccctgggcgatgtgcccatcttcatcgccatgatgaaccctaccggc
ctcgctgcccagacacacaaactcaagatcggtgacatgatcgtcagtatctgtgggacc
gctactgagggtatgagccacagccaggccgtcaccctgctgaagaatgccaccggcacc
atcgagctgcaggtggtagcagggcgtgataccacagtgaccggcccgtctcaggagcag
acagctgccggactctcagtctccagccttactgctactagcatcttccacgacgacctg
ggacctcctcaatataagaccattaccctggccaggggcccagatggcctgggcttcagc
attgttggtggctttggaagcccacatggagacctgcccatttatgtgaaaaccgtgttt
gggaagggggcagcgtcagaggacgggcgtctgaagcggggggatcagattatggctgtt
aacggacagagtctggagggggtcacccacgaagaggccgtgggcatcctgaagaggacc
aagggaacaattgccctcactgtgctctcttag
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integrated database retrieval system
