Oncorhynchus mykiss (rainbow trout): 110531747
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Entry
110531747 CDS
T07259
Symbol
sec24d
Name
(RefSeq) protein transport protein Sec24D
KO
K14007
protein transport protein SEC24
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110531747 (sec24d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110531747 (sec24d)
Membrane trafficking [BR:
omy04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110531747 (sec24d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
110531747
NCBI-ProteinID:
XP_021470814
Ensembl:
ENSOMYG00000044726
UniProt:
A0A8C7UU57
LinkDB
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Position
9:22728099..22756998
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AA seq
1043 aa
AA seq
DB search
MSQQGYVATPPYSQAQPGMGGYPAGFGSAPAQPLYRHYGGPPQSFPAPPTGMMKPVSSPS
GMPPPQVPSHYGSNGQQNGAHPQSYPAPPYGQPLQSPYHSMAHQGPPPAQQLTNQMGAMN
LGYGPGPVQSPQAPPTSHLTQQQFQTAPPTAMGHPPMGPHSSQMAHPQSPLAGPTMAGPQ
SMGGPPPMGGMGRPFPGPPPPGAGGFQQPGPGAAGPPGHPQQLQGQFGGQMAGPGMAGPG
MAGPGMAGPGMAGPFQGGAAQMAGPPQKKLDPDSIPSTTQVIEDDQAKRGGQVYTTNLRG
QVPPLVTTDYTVQDQGNASPRFMRCTTYSFPCTADLAKQCQVPLATIIKPFATVPKNETP
MYVVNHGETGPIRCNRCKAYMCPYMQFTDGGRRYQCGFCNCVNEVPAFYFQHLDHMGKRV
DFYERPELSLGSYEFAATLDYCKNNKPASPPAYIFMIDVSYANIKSGLVRLVCDELKTLL
DNLPREDGAESSMVKVGFVTYNKILHFYNVKSALAQPQMMVVSDTAEMFVPLLDGFLVNF
QESRAVINNLLDQIPDMFADTNESETVFAPVIQAGVEALKAAECSGKLFIFHSSIPTAEA
PGKLKNRDDKKLINTEKEKTLFQPQKAVYEQLSKDCVSQGCSVDLFLFPSQYVDIATMGD
VATHTGGSVFKYSNFQVERDGQHFLSDLRKDVEKAIGFDAIMRVRTSTGFRATDFFGAIH
MNNTTDVEMAAVDCDKAVTVEFKHDDTLSEETGALMQCALLYTTISGQRRLRIHNLSLNC
SAQLSELYKSCETDALVNFFAKSAYRAMLNQPLKTVKEILVNQAAHMLACYRKNCASPSA
ASQLILPDAMKVFPVYLNSLLKTGPLVGSAELSTDDRAHQRLSTTAMGVEDTQLLLYPRL
IPLHNMDVASDVVPTPVRCSEERLTDAGMFLLENGCSLFLWLGQACPPEMIQSIFNVPSL
AHVPVDLRSLPELDNPQSQKLRSIIDSLLDQRPSSMKLMIVKQKDRSEIMFRQHLVEDKG
LHGGASYMDFLCYVHREIRQVLT
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcagggttatgttgccacacctccctattcccaggcccagcctgggatgggg
ggatacccagccgggtttgggagcgcgcctgcccagcccctctatagacactatggggga
ccacctcaatcattccccgccccaccaacaggtatgatgaagcctgtgtcgtccccttcc
ggcatgcctccaccacaggtccccagccattacggctcaaacggccagcagaacggagct
caccctcaaagctaccctgcccctccgtatggacagccacttcagtccccctatcacagc
atggcccaccagggcccgcccccagcacagcagctcaccaatcagatgggtgccatgaac
ctcggatatggtccagggcccgtgcagagccctcaagcacctcccacctctcacctaacc
cagcagcaattccagactgcccctcccacagccatgggacatccacccatgggcccccac
tcgtctcagatggctcacccacaatcacccctagctggtccaactatggcagggccccaa
tctatgggtggccccccacccatgggaggcatgggtaggcccttccctggcccaccccct
ccaggtgctgggggcttccagcagcctgggcctggagctgctggaccaccaggacatcct
cagcaactacaaggtcaatttggggggcagatggcgggacccgggatggcgggacccggg
atggcgggacccgggatggcgggacccgggatggcgggacccttccaaggtggggcagcc
caaatggccggcccacctcagaaaaagctggatcctgactccatccctagcacaacacaa
gtcatcgaggacgaccaagccaaacgagggggacaggtgtacactacgaacctcaggggc
caggtgcccccgctggtcaccactgactatacagtacaggaccaaggaaacgccagccca
aggttcatgcgttgcaccacctactctttcccctgcacggctgacctggctaagcagtgc
caagttcccctggccaccatcatcaaacccttcgccacagtgccaaagaatgagactcct
atgtacgtcgtgaaccatggtgagactggcccaatccgctgtaaccgctgcaaggcctac
atgtgtccctacatgcagttcacggacggtggccgccgctaccagtgtggcttctgcaac
tgcgtcaacgaagtgccagccttttatttccaacacctggaccacatgggcaaaagggtg
gacttctacgagaggccagagctgtcgctggggtcctacgagttcgccgccaccctggat
tattgcaagaacaacaagccagccagtcctccagcgtacatcttcatgattgacgtgtcc
tatgccaacatcaagagcggactggtcagactggtgtgtgatgagctgaagaccctgcta
gacaacctgcccagagaggatggtgctgagagctcgatggtgaaggtgggcttcgtcacc
tacaacaagatcctacatttctacaacgtgaagagtgccctggcccagccccagatgatg
gtagtatccgacacggcagagatgttcgtcccgctgctcgacggcttccttgtcaacttc
caggagtcgcgggcagtcatcaacaatctcctggaccagatccctgacatgtttgccgac
accaatgagagcgagacggtctttgcccccgtcatccaggctggggtagaggcactgaag
gcagcagaatgcagcggcaagctgttcatcttccactcctccatccccaccgccgaggcc
cctgggaaactgaagaacagggacgacaagaagttgataaacacagagaaggaaaagact
ctgttccagccccagaaggctgtctatgagcagctgtccaaggactgtgtgtctcagggc
tgcagcgtggacctcttcctcttccccagccagtacgtggacatcgccaccatgggagac
gttgccacacacacaggaggctccgtcttcaagtacagcaacttccaggtggagagggat
ggacagcatttcctgagtgacctgaggaaggatgtggagaaggccatcgggtttgatgcc
atcatgagagtccgcaccagcacaggcttcagggctacagacttctttggtgccatccac
atgaacaacaccacagacgtggagatggctgccgtggactgtgacaaggctgtgacggtg
gagttcaaacatgatgacacacttagcgaggagacgggcgctctcatgcagtgtgcattg
ctgtacacgaccatcagcggccagcggcgtctgcggatccacaacctcagtctgaactgc
agcgcccagctctctgagctctacaagagctgtgagacggacgcccttgtcaacttcttc
gccaagtcagcataccgtgccatgctgaaccagcccctgaagacggtgaaggagatcctg
gtcaaccaggcggcccacatgctggcctgctacaggaaaaactgtgccagtccctccgct
gccagccagctgatcctgcctgatgccatgaaggtgttcccagtctacttaaacagcctg
ttgaagactggtcccctggtgggcagcgctgagctctctacagatgacagggctcaccag
agactcagcaccacagccatgggggtggaggatacccagctgctgctctatccacgcctt
atcccactgcacaacatggacgttgccagtgacgtggtgccaactccggtgcgctgctct
gaagagcgcctgacagatgccggcatgttcctgctggagaatgggtgctccctcttcctg
tggctgggccaggcctgccccccagagatgatccagagcatcttcaatgtgccctccctc
gcccatgtgcccgttgacctgaggtccctaccagagctggataacccccagtctcagaag
ctgcgctccatcattgactccttgcttgaccagaggcccagctccatgaagctcatgatt
gtgaagcagaaggaccggtctgagattatgttccgccagcacctggtagaggacaagggg
ctccacggtggagcctcctacatggacttcctgtgctatgtccaccgcgagatcagacaa
gtcctcacttaa
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