Oncorhynchus mykiss (rainbow trout): 110531756
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Entry
110531756 CDS
T07259
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110531756 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110531756 (dhx15)
03009 Ribosome biogenesis [BR:
omy03009
]
110531756 (dhx15)
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110531756 (dhx15)
Spliceosome [BR:
omy03041
]
Complex A
U2 snRNP components
U2 related factors
110531756 (dhx15)
Complex B
110531756 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
110531756 (dhx15)
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
90S particles
Helicases
110531756 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
WHD_HA2
AAA_22
AAA_19
Cas3-like_C_2
AAA_25
SRP54
nSTAND3
nSTAND_NTPase5
AAA_29
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
110531756
NCBI-ProteinID:
XP_021470825
Ensembl:
ENSOMYG00000045446
LinkDB
All DBs
Position
9:complement(23647945..23684171)
Genome browser
AA seq
760 aa
AA seq
DB search
MSHFVYHLMIQLSEDINVVLKHMANFVRTRFIQRDRDRDRDERSKDRDRDRDAKPSGMAL
NPAVGSAGLSHKQTAMQQQINPFTNLPHTPRYYEILKKRLQLPVWEYKERFNDILGRHQS
FVLVGETGSGKTTQIPQWCVDMVKGLGGPKKAVACTQPRRVAAMSVAQRVADEMDVMLGQ
EVGYSIRFEDCSSAKTFLKYMTDGMLLREAMNDPLLERYGVVILDEAHERTLATDILMGV
LKEVVRQRSDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYLEAA
IRTVIQIHMCEEEEGDCLLFLTGQEEIDEACKRIKRDIDDLGHDAGDIKIIPLYSTLPPQ
QQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVES
LLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLK
KLGIDDLVHFDFMDPPAPETLMRALELLNYVAALNDDGDLTELGSMMAEFPLDPQLAKMV
IASCEFNCSNEILSITAMLSVPQCFVRPTEARKAADESKMRFAHIDGDHLTLLNVYHAFK
QNHESTQWCYDNFVNYRSLMSADNVRQQLSRIMDRFSLPRRSTEFTSRDYYINIRRALVT
GFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVMYNEFVLTTKNYIRTCTDIKP
EWLVKIAPQYYEMGNFPNCEAKRQLERIIAKLSTKEYSQY
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtctcattttgtatatcatctgatgattcagttgtcagaggacatcaacgtggtgctg
aaacacatggccaactttgtcagaacaagattcattcagcgagaccgcgacagggaccgc
gacgagcggtcgaaggacagggacagagaccgggatgccaagccctctggcatggccctg
aacccggctgttggcagcgcaggcctctcccacaagcagacggccatgcagcagcaaatc
aacccattcaccaacctgccccacacgccgcgttactacgagatcctgaagaagaggcta
cagctgccagtgtgggagtacaaggagcgcttcaacgacatcctgggacgccaccagagt
ttcgtgctcgtcggagagacgggctccggcaagaccacgcagatcccccagtggtgtgtg
gacatggttaaggggttgggcggacctaagaaggcagtggcctgtacccagcccaggagg
gtggcagccatgagcgtggcccagagggtggccgacgagatggacgtcatgctgggccag
gaggtcggttactccattcgattcgaggactgcagctcggccaagaccttcctcaagtac
atgacagacggtatgttgctgcgggaggccatgaacgaccctctgctggagcgctacggc
gtcgtcatcctggacgaggcccacgagagaacacttgccacagacatcctcatgggcgtc
ctcaaagaggtggtccgacagaggtcagacctcaaggtcatcgtcatgagcgccacgctg
gatgccggcaagttccaggtgtactttgacagctgtccgctgctgaccatccctggacgc
acgcacccggtagagatcttctacacgccggaacctgagagggactacctggaggcagcc
atccgcaccgttatccagatccacatgtgtgaagaggaggagggcgactgtctgctcttc
ctcactggacaagaggaaatcgacgaggcctgcaagcgcatcaagagggacatcgacgac
ctgggacacgacgcgggggacatcaaaatcatcccgttgtactcgacgctgccgccccag
cagcagcaaaggatctttgagccgccaccaccccgcaagcccaacggagccatcgggagg
aaggtcgtggtttcgacaaacatcgctgagacatccctgaccattgacggtgtggtgttt
gtaattgatcccggatttgccaagcaaaaggtgtataaccctcgtatcagagtggagtcc
ctcctggtgacggccatcagcaaagcctcggcccagcagagggcggggcgcgccgggagg
acacgcccagggaagtgcttccgcctctacacagagaaggcctacaagaccgagatgcag
gacaacacgtatccagagattttgaggtccaacctgggttcggtcgtgctgcagctcaag
aagctaggtatcgacgacttggtccatttcgacttcatggacccaccagcaccggaaacc
ctgatgcgggccctggagctgctcaactacgtggcggcgctcaacgatgacggcgacttg
acggagctaggctccatgatggccgagttccccctagacccgcagctagccaagatggtg
attgcctcctgcgagttcaactgctccaatgagatcctgtccatcacagccatgctgtca
gtcccacagtgcttcgtacgacccacggaggctaggaaggcggccgacgagtccaagatg
cgtttcgcccacattgacggagaccacctgaccctcctcaatgtctaccacgccttcaaa
cagaaccatgagtcgacacagtggtgctacgacaactttgtgaactacaggtcgctgatg
tcggccgacaacgtgcgccagcagctgtcccggatcatggaccgcttcagcctgccccgc
cgcagcacagagttcaccagcagagactactacatcaacattcgcagagcgctggtcaca
ggattcttcatgcaggtagcccatttggagcgtacaggccactacctgactgtgaaggac
aaccaggtggtccagctgcacccctccactgtgctggaccacaagccggagtgggtgatg
tacaatgagtttgtgctgaccaccaaaaactacatccgcacctgcaccgacatcaaacca
gagtggctggtgaaaatcgccccgcagtactatgagatgggaaacttccccaactgtgaa
gccaagagacagttggagcgcatcatagctaaactctcaaccaaggaatactctcagtac
taa
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integrated database retrieval system
