Oncorhynchus mykiss (rainbow trout): 110531786
Help
Entry
110531786 CDS
T07259
Name
(RefSeq) DENN domain-containing protein 4C isoform X2
KO
K20163
DENN domain-containing protein 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110531786
Membrane trafficking [BR:
omy04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
110531786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
CA109-like
Motif
Other DBs
NCBI-GeneID:
110531786
NCBI-ProteinID:
XP_021470883
Ensembl:
ENSOMYG00000004585
LinkDB
All DBs
Position
9:complement(24630697..24705729)
Genome browser
AA seq
2031 aa
AA seq
DB search
MWQGLQTVTDYKGKTSHDDVLPPDKLNTFVRIEDCELSFSVADARPAMIEDKGHRVTDYF
VVAGLTDKSTPLEQDLSETKSSGPKAPITDLAVINKSAGETVPEGFTCMESTYSGQQANL
NHGSLKSHELFLCYKRDRDKPPLIDIGVLYEGKERLIQGCEVIQATPYGRCANVNNSSAT
SQRIFITFRRAPPVQPQNSLAVTDICIIVTSKGETPPHTFCKVDKNLNCGMWGSSVFLCY
KKSVSASNSINYKAGLIFRYPEDDYESFPLSESVPLFCLPMGAKIECWAPNTRYPLPVFS
TFVLTNSSGEKMYGAAIQFYEVYPIDLLSEKQKVQLGLLTTVEKKMIPNRTVNTNKCICL
LSRWPFFESFRKFLMFLYKLSVSGPHPLPIEKHISHFMHNVPFPSPQRPRILVQLSAHDT
LMLAQPVCTPLPLSGADYSTLLMNLGSENCATLLHFVLLESKILLHSLRPAVLTGVAEAV
VAMIFPFQWQCPYIPLCPLSLAGVLNAPFPFIVGVDSRYFDLYDPPPDVVCVDLDTNTIY
LSDEKRHSNWKNLPKKPCKSLFNSLANLHHQLGIVRRTAQEGLAVEMTPIEADFTWHKKM
TSLEMEIQEALLRFMANILKGYRSYLKPITQAPSEKATSADSLYDLQGFLRSRERTHQKF
YSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCIEKLFPSDKGNDKGTKVEGESSEDTKL
MELDESQKSEHTVFVMPPEPPATEEGSDPLAHYSYKSFPRLCMDLFDRPREVIPALRSST
PGASLSSSPALLAKRTKQEIKLAYKMAKRFYSNPPLWAKCLFSHCYSLWFICLPVGVRLA
QSKSWAMQQAYNVLLKMRTSEVEVLDEVCYRVVMQLCGVYGQPVMAVRVLVEMKKAGVHP
NAITYGYYNKAVLEGPWPSRNRSGLFMWAKVRNVARALSQFKQAVHRMPAMEGPTVITTA
CSGSDLGPSAGGLASSDGDRLSHGSADSSSEANGEDHTLFARSLIIADTADNHCSGGVQS
DQGYGSKDELHQDLVDLAQSAALVIAVDQCSKSAAQHNGGDIAGSVDSAVAVAEPPSPVK
ALPHVPSIVKLSTGASFDTAMKRGDTAPGKLFSLRSQSEDISLPVEGRSAPPGGSGVAGP
AVQVQRQKAFSERSCSFSAESRAGMLMEKHGVDHIVSRMGADARILAAALSGGGTTPPPS
KPLPSAAKALFKDLELDSEEGRGPTLGKLSEEEGPVTDPTPLEEGLGKEEKRMKGDRKEA
GGEDEMGLKLGEDEMGLKLEEEDEERDSGGRGSISLPTLEIKEVQVGADPLSLLVSEHEE
LASVTSQELPQSLPPMVSRNLADEIEMYMSLRSPLGPKSCSMELHQEGQGGDPSPDAAPV
KQPQERRSSLPVPPVKHPGGSNGDTTPKRSPAAVTRSKTFAVKASRSPASSRGVVASPRS
SPLTALVRSSQSGSLGSVINSISGMKMDTLLSGPKIDVLKSGMKQAGNLASKVWGAVASA
YSYSDDEDELGPGYRERDSFPAGLDESMLLGGGGSDSPTHRGPTQGLVSNGLTQSSTSLG
SSSGSSDTGRGPHSTHVTPGRPGRGPDSERSDQGSHHTSSSSIYQNCALEVLMSSCSQCR
SCECLVYDEEIMAGWTADDSNLNTTCPFCRTAFLPLLHVEFHDLRTTTAFYLNPSASGDS
IHSTSQQATATGSTENKVGAAMDTPTPGLISFPESEDPGEAPASQTATHKSLIPEPAQSD
PLGLLEHQAGKRGTSLTRSNSVGGPLQSLVAQREPGHSVSTTSLPCSLTEMDGLGQKRPN
PMPVSVPYLSPLVLRKELETLLENEGDQVIYTHKFLSQHPIIFWNLVFYFQRLDLPSYLP
GLILTSEHCNNGVQLHQTSLSQDSKQVYVQLLWDNINLHQEPGDPLYQSWRTLMEKKGTL
APTDYQETRTLLNSIVRSIQTNDVYGPINLLLREVKRNPEVKRQRGIYREILFLALVALG
RENIDVEAFDREYRLAFDELSPEQLKALHKIDRPPNTNIQWCLKCFGAPVI
NT seq
6096 nt
NT seq
+upstream
nt +downstream
nt
atgtggcagggactccagacagtcacggattataaagggaaaaccagccatgatgacgtc
ttgccaccggacaagctaaacacctttgtccgcatcgaggactgtgagctatcgttctcc
gtggccgatgcacgaccagccatgattgaggacaagggccaccgcgtgaccgactacttt
gtggtggccgggctgacggacaagtccacgcccctggagcaggacctgtcggagaccaag
tccagcgggcctaaggcgcccattactgacctggccgtcatcaacaagtcggcgggagag
actgttcccgagggcttcacctgcatggagagcacctacagtgggcagcaggccaacctc
aaccacggcagccttaagagccacgagctgttcctctgctacaagagggaccgcgacaag
cccccgctcatcgacatcggtgtgttatacgaagggaaggagcgtctcatccagggctgt
gaggtcattcaggccacgccgtacggccggtgtgccaacgtcaacaacagctctgccacc
tcgcagcgcatcttcatcaccttccgccgcgcgccgcccgttcagccccagaactcactg
gccgtcaccgacatctgcatcatcgtcacgagcaagggcgagacgccgccgcacaccttc
tgcaaggtggacaagaacctcaactgtggcatgtggggctccagtgttttcctgtgctac
aagaaatcagtgtccgcgtccaactctatcaattacaaagccggcctcatcttccgctac
ccagaggatgactatgagtccttccccctgtctgagtctgtgcccctgttctgcctcccc
atgggggctaagatcgagtgctgggcccccaacacacgctaccctctgcccgtcttctcc
acctttgtgttaaccaactcctctggggaaaagatgtacggcgcagccatccagttctac
gaggtctaccccatagatctcctcagtgagaagcaaaaggtgcagctgggcttgctcacc
accgtggagaagaagatgatccccaaccggacggtcaacaccaacaagtgcatttgcctg
ctctcccgctggcccttcttcgagtctttccgcaagttcctcatgttcctctacaagctg
tccgtctcgggtccccacccgctgcccatcgaaaagcacatctcgcactttatgcacaac
gtgcccttcccttcacctcagaggcccagaatcttggtccaactctctgcacacgacacc
ttgatgctcgcccaacctgtgtgtactcctctccctctcagtggggcagactacagtacg
ttgctgatgaacctgggctctgagaactgtgccacgctgctgcattttgtcctgctggag
agtaagatcctgcttcactccctgagacccgctgtactcaccggggtagcagaggccgta
gtggcgatgatcttcccgttccagtggcagtgcccgtacatccccctctgcccgctctcc
ctggcgggggtcctcaatgccccctttcccttcatcgtgggcgtggactcccgctacttt
gacctttatgaccccccgccggacgtggtctgtgtggacctggacaccaacactatttac
ctgtctgatgaaaagagacacagtaactggaaaaacctcccaaagaaaccctgcaagagc
ctgtttaactccctggccaacctgcaccaccagctgggcatcgtgcgtcggacagcccag
gagggcttggcggtggagatgacccccatcgaggcggacttcacctggcacaagaagatg
acctccctggagatggagatccaagaggccctgctgcgcttcatggccaacatcctgaag
ggctaccgctcttacctcaaacccatcacccaggccccctccgagaaggccacctccgca
gactcactatacgacctacaggggtttctgaggagcagggagcgcacccaccagaagttc
tactcccagctgaccaagactcagatcttcatccgcttcattgaggagtgcacgttcgtc
agcgacaaggatacgggcctggccttcttcgacgactgcattgagaagctatttccctcc
gataaaggcaacgacaaaggcactaaggtggagggtgagtcctcagaggacaccaagctt
atggaactagacgaatcacagaagagcgagcacactgtctttgtcatgcccccagaaccc
cccgccaccgaggaagggtccgacccccttgcccactacagttataagagttttccacgg
ttgtgtatggacctgtttgaccgccccagggaggtgataccagcgctgaggagtagtaca
cctggggccagcctgtccagcagccctgcactactggccaagaggaccaagcaggagatc
aagctggcctacaagatggccaagcgcttctactccaaccctccgctgtgggccaagtgt
ctgttcagccactgctacagcctgtggttcatctgcctgcccgtgggggtgaggctggct
cagtccaagagctgggccatgcaacaggcctacaacgtcctgctcaagatgaggacatct
gaggtggaggtgctggatgaggtgtgttaccgtgtagtgatgcagctgtgtggcgtgtac
ggtcagcctgtcatggccgtccgtgtcctggtggagatgaagaaggcaggggtgcaccct
aacgctatcacctacggatactacaacaaggctgttctggaaggcccctggcccagtcgg
aaccgcagtgggctcttcatgtgggccaaggtgcgcaacgtggcgcgcgctctctctcaa
ttcaaacaggcagtccaccggatgcccgccatggaaggacccaccgtcatcacgacagct
tgctcaggaagtgatttaggcccgtcagcgggcggcttggcgagcagcgacggcgaccgg
ctgagccacgggagtgcagacagctccagcgaggcaaacggagaggatcacaccctgttc
gcacgcagcctcatcatagcagacaccgcagacaaccactgcagcggaggagttcagtct
gatcaaggctacggctctaaagatgaattgcaccaggacctagtggatttggctcaatca
gcagcccttgtaatcgctgtggatcagtgcagcaagtccgcagcacagcacaacggtggg
gacatagctggctcggtggacagtgcagtggctgtagcggagccccccagccctgtgaaa
gcactcccacatgtccctagcatcgtcaaactgtccacaggggcgagttttgataccgcc
atgaagagaggagacactgcccctgggaagctgttctctctgcgcagccagagcgaggac
atctccctgccggttgagggtaggtctgcacctccgggtggctccggggtggcggggcct
gcagtccaggtccagcgccagaaggccttctcggagcgcagctgcagcttcagcgccgag
agtcgtgccggcatgctgatggagaaacatggtgtggaccacatcgtcagccgcatgggc
gccgatgcacggatcttggcggcggctctctctgggggcggcaccacccccccgccttca
aagccgcttcccagtgcggccaaagccctctttaaggacctggagttggactctgaggag
gggcggggtccgacgctggggaaactgtcagaggaggaggggccagtaacggacccaacc
ccactggaggaggggttagggaaagaggagaagaggatgaaaggtgaccggaaggaggca
ggaggggaggatgagatgggtctaaagttgggggaggatgagatgggtctaaagttggag
gaggaagatgaggaaagagattcaggggggaggggctctatttctctgccaaccttggag
attaaggaggtgcaggtaggggcagaccccctctccctccttgtctcggagcacgaggag
ttagcctccgtaaccagtcaggagctgccgcaatccctgcctcccatggtgtcccgaaac
ctggcagacgagattgagatgtacatgagcctccggagcccgcttggccccaaatcctgt
agcatggagctccaccaggagggccagggaggggacccttccccggatgctgccccagtg
aagcaacctcaagaacggaggtccagcctccccgtgccccctgtcaaacacccagggggg
tcaaacggggacacgacgcctaaacgcagccccgcagcagtcacgcgctccaagaccttc
gccgtgaaggcctccagaagccctgcctcttccaggggtgttgtggccagcccaaggtca
tcgccactgactgcgctggtgaggtcgtcgcagagtggttcgctggggtcggtcatcaac
tccatctcgggcatgaagatggacaccctgctctcgggaccaaagatagacgtgttgaaa
tcaggcatgaagcaggcagggaacctggccagcaaggtgtggggggctgtggcctcagcc
tactcttactctgacgacgaggatgaactgggccccggctatagggaaagggacagtttc
cctgccgggctggatgagtccatgctgttggggggtggaggaagtgacagtcccacccac
agagggcccacccaaggcctggtgtccaacggcctgacccagagcagcaccagcctgggc
agcagcagtgggagcagtgacacagggagaggaccccactccacacacgtgactccagga
aggccaggcagaggtccagactctgagaggtcagaccaaggctcccaccacaccagctcc
tctagtatctaccagaactgtgcccttgaggtgctgatgtccagctgctcccagtgtcga
tcctgtgagtgtctggtatacgatgaggagatcatggcgggctggacggcagacgattcc
aacctcaacaccacctgtcccttctgccgcaccgccttcctgcccctgctccacgtcgag
ttccacgacctgcgcaccaccacagcgttctacctgaaccccagcgcatcaggagacagt
atccacagcaccagccagcaggccacagctacaggctccaccgagaacaaggtaggggct
gcaatggacaccccgacccctggcctcatcagcttcccagaatctgaggacccaggagag
gccccggccagccagactgccacgcacaagagtttgataccggagccggctcaatcggat
cccctgggcctgctggagcaccaggcagggaaaagggggacgtctctgacacgcagcaac
agtgtgggcgggcctctacagagcctggttgcccagagagaaccaggacacagcgtgtcc
accaccagcctgccctgcagcctgacagagatggatggcctgggacagaaacggcccaac
ccaatgcccgtgtctgtgccctacctcagccccctggtcctccgcaaagaactagagacc
ctactggagaatgagggagaccaagtcatctacacccacaagttcctgagccagcacccc
atcatattctggaacctggtgttttatttccaacgcctggacctgcccagctacctgcct
ggcctcatcctcacctcggaacactgtaacaatggagtacagctccaccagacatccctg
tctcaagacagtaaacaggtgtatgttcagctgctgtgggacaacatcaatctgcaccag
gaacctggggatcccctctaccagagctggaggaccctgatggagaagaagggcaccctg
gcccccacggactaccaggagacacggactctcctcaacagcatcgtccgcagcatccag
accaacgacgtctatggccccatcaacctgcttctccgggaggtcaagaggaacccagag
gtcaaacgccaaaggggtatctatcgggagatcctcttcctggcgctggtggcattggga
cgggagaacattgacgttgaggcttttgaccgtgaataccgcctggcctttgatgagctg
agcccagagcagctcaaggccctgcataagatcgaccggccacccaacaccaacatccag
tggtgcctcaagtgcttcggcgctccagtcatctga
DBGET
integrated database retrieval system
