Oncorhynchus mykiss (rainbow trout): 110531879
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Entry
110531879 CDS
T07259
Name
(RefSeq) VPS10 domain-containing receptor SorCS2 isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110531879
Membrane trafficking [BR:
omy04131
]
Protein recycling
Others
Others
110531879
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
DUF6786
InlK_D3
BiPBP_C
DUF2769
Motif
Other DBs
NCBI-GeneID:
110531879
NCBI-ProteinID:
XP_036843675
LinkDB
All DBs
Position
9:complement(28667239..28993223)
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AA seq
1171 aa
AA seq
DB search
MSAIGLMARSMVSLRPKGIVSAHLCLAVVIAWMSLMRPVLCDSGVLHRSDGDRLLDSRGA
VGIDGVDGVFGPGLGDNDGDAGDVESPRFRRALSQEKVSLLSSSFVLKGDATHNQAMVHW
TGENSSVILILTKYYHGDSSKVLESSLWRSSDYGTTYSKLNLMPGTTIVVSNFYICPINK
KKVILVSSSINERDQMLFISTDEGSSFQRQPLSFTAETLLFHPKEEDKVLAYCKEGKLYV
STDLGRKWTLMQERVTKDRIYWSVAGVDVDPDLVHMEMQDTSGGYLYVTCLIQNCSDKMV
TAQFLGKIDHNSLSVQDDYIFVKVTTGNRTKHYVSYRRNEFVQMRFPKYALPKDVHIVST
DESQVFLALQEWYQTDTYNLYQSDPQGVYYSVVLENVRSAKQPEESALIDILEVRGVKGV
FLANQKVDGKVTTLITYNKGRDWEPLAPPTTDMNGKPVTCQSPDCHLHLHLRWADNPYVS
GTVHTKDSAPGLIMGAGNLGSQLVEYKEEMYITSDCGKTWRQVFEEEHHILYLDHGGVIV
AIKDTSIPLKILKFSIDEGRTWIIHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDW
ELVKVDFRQSFPRQCTEADYDSWKLTDLKGEKCIMGQERSFRKRKDTAFCIKGKSYTSAL
TTKTCQCSETDFNCDYGFERAQSLRTEGDRCFADFWHDPDSPPDDCHLGHDFESSTGYRK
VVSNMCEGGVNKQQSAKQHTCPLLPPRGLQLGIKGQILAVAPGDDITFIVHQEKGDTSNT
KYQVDLGDGVRAIYQNLTVTDEPIQHRYEQLGVYRVTVKAENMAGHDQATMYIQVTAPLQ
EVHLEVVPIAGVNQEVNLTAVVLPSEANLTVFYWWIGNNLQPKLSLENSLITRFPAEGEV
SVTVQASNGRSMVQDTKTVRIYDLFQVIPLAFSSNLDLLNPNIPEWREDVGQVVTRILAK
ITGVPQESLVTMVKPGLPTTAELYILPPESKPAKRSVFVDKRIPAIKQAFNENNVSFIVR
GGLQVLVTLADPNAGLVANDSSPRATEIGSQGGVAGPGVWALAVIFLISVIATGSFILYK
FKSPWLRTEDAYPPLFFRKLPGRNVYAQMHNEKEQEMTSPVNHSEDTQHIIQGEEFIDDD
LDSQTLGNAGGNHSGVVLSINSRELHSYLTS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctataggcctaatggcgcgaagcatggtatctctgcgtccgaaaggaatcgtt
tcagcgcacctgtgcttggccgtggttatcgcctggatgtcattgatgagacccgtgcta
tgtgacagcggcgttttacaccggagcgacggggatcgtctgcttgacagccgcggcgct
gtaggcatagacggggttgacggagtgttcggaccgggcttgggtgataatgatggggac
gcgggcgacgtggaatccccgcgcttcaggagagcactatcccaagagaaagtgtccctg
ctcagcagctcgttcgtgctcaaaggggatgctactcacaaccaggcgatggtgcactgg
actggagagaacagcagcgtcatcctcatcctgaccaagtactaccatggtgactccagc
aaggttctggagagctccctctggaggtctagtgactatggcaccacctacagcaagcta
aacctgatgcctgggacaactatcgtggtctctaacttctatatctgccccatcaacaag
aaaaaggtgatcctagtgagctcgtccattaacgagcgtgaccagatgctgttcattagt
acagacgagggctcctcgttccagcgacagcccctctccttcaccgcggagaccctcctc
ttccaccccaaggaggaggacaaggtgctggcttactgcaaggagggaaagctctatgtg
tccacggatttgggccggaagtggactctaatgcaggaacgagtgaccaaggacaggata
tattggtctgtggctggtgtagatgtggaccctgacttggtgcatatggagatgcaggac
acaagtggagggtacctgtacgtgacctgtctgatccaaaactgctcagacaagatggtg
acggctcagttcctggggaagatcgaccacaactctctctcagtccaagacgactacatc
tttgtcaaggtgaccacaggaaaccgcaccaagcactacgtttcataccgacggaatgag
tttgtccagatgaggttccctaaatacgccctaccaaaggacgtccacatagtgagtacg
gacgagagccaggtgttcctggccctgcaggagtggtaccagacagacacctacaacctg
taccagtcggacccgcagggcgtctactactccgtcgtgctggagaacgtccgcagcgcc
aagcagccggaggagagcgcccttatagacatactggaggtccgcggggtcaaaggtgtc
ttcttggccaatcagaaggtggatggcaaagtgacgactctcatcacctataacaaaggc
cgagactgggaaccccttgccccgcctaccactgacatgaacggcaagccagtcacctgc
caatcacctgactgtcacctccacctccacctgcgctgggctgacaacccttacgtatca
gggaccgtccacaccaaagactccgcccccggactcatcatgggtgcaggtaacctgggt
tcccagctggtggagtataaagaagagatgtacatcacctctgactgtgggaagacttgg
agacaggtgtttgaggaagagcatcacatcctgtacctggaccatggaggggtcattgtt
gccatcaaagacacctccatccccctcaaaatactcaagttcagtatcgatgagggaagg
acgtggatcatccacaacttcaccagcacctcggttttcgtcgatggacttctgagcgaa
ccgggagatgagaccctggtcatgacggtgtttggtcacatcagttaccggtcagactgg
gagcttgtcaaggtggacttcagacagtcattccccagacagtgtaccgaggccgactac
gactcctggaaactcactgacctgaagggagagaagtgcatcatgggtcaggagaggagt
tttaggaagaggaaggacaccgcattctgcatcaaggggaagagctacacctctgccctc
actaccaagacctgccagtgctccgagacagacttcaactgtgactatgggtttgagcgt
gcccagagcctgaggaccgagggagatagatgctttgctgacttctggcatgacccagac
tcgccacctgatgactgccatctgggacatgacttcgagtccagcacggggtacaggaag
gttgtgtccaacatgtgtgaggggggagtgaacaagcagcagagcgccaagcagcacacc
tgtcctctgctgcctcccagaggcctccagctgggtataaaggggcagatactggctgtg
gcacctggtgatgacatcaccttcatcgtccaccaggaaaagggtgacaccagcaacact
aaataccaggtggatctgggtgacggggtgagggccatctaccagaacctgacggtgaca
gacgagcccatccagcaccgctacgaacagctgggggtctaccgtgtcactgtcaaggcc
gagaacatggccggacacgaccaggccaccatgtacatccaggtcacagcccctctacag
gaagttcacctggaagtagttcccattgccggggttaaccaggaagtcaacctgacagct
gtggtgcttccttcagaggccaacctgactgtcttctactggtggataggaaacaaccta
cagcccaagctgtccctggagaatagtctgataacgcggttccctgcggaaggagaggtg
tctgtcactgtccaggcctctaatggacgctccatggtgcaggacaccaagacagtccgc
atctacgaccttttccaggtcatccctctggccttcagcagtaacctggacctcctcaac
cccaacattccagagtggagggaggacgtgggtcaggtggtcaccaggattctggccaag
atcacaggtgtcccccaggagtccctggtaaccatggtgaagccgggcctgcccaccact
gccgagctgtacattctcccaccagagagcaagcctgctaagaggagtgtatttgtggat
aagcgtatccctgccattaagcaggccttcaatgagaacaacgttagcttcatcgtacga
ggaggtctacaggtgttggtgaccttagctgatcctaacgcaggactagtagctaatgac
tcgtccccgagagcgacggagatcggttctcagggtggagtggcaggtccaggtgtctgg
gctctggctgtcatcttcctcatcagcgtcatcgctactggatccttcatcctctacaag
ttcaagagtccttggcttaggactgaggatgcctatcctccactatttttcagaaagctg
cctggccgaaatgtgtatgcccagatgcacaacgagaaggagcaggagatgaccagccct
gtcaatcacagcgaggacacgcagcacatcatccagggggaggagtttatcgacgacgat
ctggactcgcagactctaggtaacgcaggaggtaaccactcgggtgtggtgctgagcatc
aactccagagagctgcacagctacctgaccagctga
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