Oncorhynchus mykiss (rainbow trout): 110531917
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Entry
110531917 CDS
T07259
Name
(RefSeq) NACHT and WD repeat domain-containing protein 2
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110531917
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
110531917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_NWD2_C
WDR55
EIF3I
WD40_WDHD1_1st
Beta-prop_EML_2
AAA_16
Beta-prop_WDR90_POC16_2nd
NPHP3_N
Beta-prop_TEP1_2nd
NACHT
AAA_22
Beta-prop_RSE1_2nd
B-prop_COPA_B_2nd
AAA_28
NPHP3
AAA
TniB
AAA_25
Motif
Other DBs
NCBI-GeneID:
110531917
NCBI-ProteinID:
XP_021471069
Ensembl:
ENSOMYG00000011663
LinkDB
All DBs
Position
9:31900060..31992396
Genome browser
AA seq
1733 aa
AA seq
DB search
MWPSGVGSRQPCPRESALRRAAISGNVLALPQHHVPTGRSVRVFICANPDDTEAERNALK
EHVYPKLRDFCRENYGIEFQVVDLYWGVDPEEWDSPDLQRLRMKLLEECLQTSAGPCFVG
LVGEKYGSIRVPGEVEAPEFERILDAAVEAGLDTHILEEWYCRDENAVPPAYYLKPKAQM
LKNYQNSMESSSAAKMKNDKAWRNVSEEIKRIFRRSVLQLQEKGTMKPPQAKKFLCSALE
DELDFALGKQTPAFLKKCVCYIRKISNFDRHAKLPEMAKYMDIVIAEDRVMRNQEAYERL
LKVRDEFIPTVVASSNLRVYSSVTHCDMKLGYSQEVESHYVEGLCKQFYEDMVDIIQATV
QQNFDTETDPLYDEILQHLSLCKNFSSFYDYKSETLDLVQEYLLPSKESRMSPLVVYGGP
CTGKTLLLAEVAKQAYTWLQTEMGPETDPVVIVRFVGSSEFATNLRTLLQSICEQIAINY
RCLIHFLPNKIQELRELLVNLLGEPSFHRPLVIILDALEQLSEADEARKLWWLPAHLPRT
VRIVVSTLPNKHGILQKLRCLIHDEGRYVELVQRDRKACSQILKQQLLGLKRKVTSGQQI
YVNEALAKCTLPMFVNLIYQEVVHWRSHKDVDDKSLCSTVHESIEQLFYSVENKLGQRFV
FRSLGYITMANVGLTEVELEDILSLDNSVLGDIMVSSNLKNPLRISYDLVARLKEELEGY
LLERQVHNATLMMWANRHLQLIAQKLYLSNEEDVHQMHSLLAEYFLGAWSGGRKKIFHCD
NNHFASLNISQHKNPHSQQPSHKEASAEKYSYDRQTPEQPWVFQCNLLEPDIFFVNHRKM
TELLYHLTRSGRMDDLMYGVIMNFSWLYTMIKIGQFEKALTDIDVAYNYSQEKELKFLAT
TLRSIKIKVMKNPASLSAELQQRLLPVVTSLPKLQHLLLECDKDGPKYCSIVPLHSSMDV
TYSPERLPLCSSYMQIVEILPTLAPNIVLVALEDGSVSTWDVESRQLLRQIDTAHSVVLG
IRLTSDEKYLVVATTKNTLLIYDNHKSCLLSEVDIKNSKHCGITGGVAFINGFTLSSHHA
LAWLEASKDVNVIDLLYGWPLYLFHCWYEVTCVQCSPDGMYAFCGQYLNTTSIFHLGTGD
KLATVTSEFSGGFVKSILVLDTIHQMVMIDNEGSLSVWNTKEITNPRLMEDYDCRGDENE
VVGIELSEDQRSILICKDKSIEVLDTKLWKMAEKFKAKHAERFVAAVLSKNGQSIVASME
NTSSIFVWRRDSGQCMASLIEISGAIVKLIKSIHHNLLLSVASSGVLSVWDIDIITAMSN
IDKTGKKIQSLQLSGREDFVFTMDGSEAIHKWNFSTGFIETVFKHEGLVENCVLTSSGDL
MVTSDDKCSQYIWHTATGENIFRINGQKISQLLMTHNDQFVVSLCEQNVSRVWRLATGHK
VCNILVTLQNALITTANTFLVGITKNKLLAVSLWSGSISKKFVCDDGISIINFKLIPDCP
DFVVFITSTETVFIWSVADESVCRRVQLPTNFLKNLEEFQISPNGKLGIISKGDENINVL
DLHSGKLRLVHAAGIIWRQKLSRDGRYLVYVCFRNSDEHDEVGVVSNLIVMRLADGKSIG
TCSLYKTPTFLCLSQRALNIIIGFEDGSIGTYTVVDRVDAALKIKIATSNSRQIVNNASQ
KIRPKCGNHAFKTIADCLWRESTEVFSRDSPINVSDSGEDETTIPTKKNELLQ
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atgtggccctcgggagtggggagcaggcagccctgtccacgggaatcggcactccgcagg
gcagccatcagtggcaatgtcctcgcactgccgcagcaccatgtccccactggcaggagt
gtccgggttttcatctgcgccaaccctgacgacacagaagcagagaggaatgcactgaaa
gagcatgtatatcccaaactacgagacttctgcagagagaactatgggattgagttccag
gtggtagacctgtactggggggtggacccagaggagtgggacagtccggacctgcagcgt
ctgaggatgaagctactagaggagtgcctccagacctccgcaggtccatgttttgttggg
ctggtgggggagaagtatggcagtatccgtgttccaggggaagtggaagctccagagttt
gagaggatcctggatgcggcggtggaggcggggctagacacacacatcctggaggagtgg
tactgccgagacgagaatgccgtgccaccagcctactacctcaaacccaaagcccagatg
ttgaagaactaccagaactcaatggagtcgagtagtgcagccaagatgaagaacgacaag
gcatggaggaacgtgtctgaggagatcaagaggatcttccgtaggtctgtcctgcagctc
caggagaagggcaccatgaagccccctcaagccaagaaattcctctgctctgccttggag
gatgaactggacttcgccttgggtaaacaaacgccagccttcctcaagaagtgtgtctgc
tacatccgcaagatctccaacttcgaccgacatgccaagcttccggagatggccaagtac
atggacatcgtcatcgctgaggaccgcgtcatgcgtaaccaggaagcctacgaacgtctc
ttaaaagtgcgggatgagtttatcccaacagtggtggcctcgtcaaacctccgcgtctac
tcctctgtgacgcactgcgatatgaagttaggctactcccaagaggtggagagccactac
gttgaaggcttgtgtaaacagttctacgaggatatggtggacatcatccaggccacggtc
cagcagaactttgacacagagacggaccccctgtacgatgagatcctccagcacctgtcc
ctgtgtaagaacttctcttcgttctacgattataagagcgagacactggacctggtgcag
gagtatctgctaccgtctaaggagagtaggatgagccctctggttgtttacggcgggcca
tgcacggggaagacactgctgctagcagaggtggccaaacaggcctacacgtggctccag
acggagatgggtcctgagacagacccggttgtcattgttcgctttgtgggctcctccgag
ttcgccacaaacctgcgcaccctcctccagagcatctgcgagcagatagccatcaactac
cgttgcctgatccacttcttgcccaacaagatccaggagttgagggagctgctagtcaac
ctgctgggggagccctctttccatcggcccctggtcatcatcttggatgccctggagcag
ctctcggaagccgacgaggcccgcaagctgtggtggctccccgcccacctgcctcgcact
gtccgcatcgtggtctccactttacccaacaaacacggaatcctccagaagctccgctgt
ttgattcatgatgaagggcgctacgtagagctggtgcagcgggaccgtaaggcctgtagt
cagatactgaagcagcagctgctggggttgaagagaaaggtgacttcgggacagcagatc
tacgtcaatgaagcgctggccaagtgtacgcttcccatgtttgtcaacctcatttaccag
gaggtggtgcattggcgctcgcacaaggatgtggatgacaagtcactgtgctccaccgtg
cacgagagcatcgagcagctcttctactccgtggagaacaagctggggcagcggttcgta
ttcaggtcactgggatacatcaccatggccaatgtggggttaacggaggtagagctggaa
gatattctgtcattggataacagtgtgttgggagatatcatggtgagttcaaatctaaaa
aacccactgaggatctcttatgacctggtggcgaggctgaaagaggaactggaggggtac
ctgctggaaaggcaggtgcataatgctaccctgatgatgtgggccaacagacacctgcaa
ctcatcgcccagaagttgtatcttagcaacgaggaggatgtgcaccagatgcacagcctc
ctagccgaatacttcctgggggcatggtcgggaggcaggaaaaagatcttccactgtgac
aacaaccactttgcctcgcttaacatctcccaacacaagaatccacactcccagcagcca
tcccacaaagaagcatccgccgagaagtactcctatgacaggcagacccccgagcagccc
tgggtgttccagtgcaaccttctggagcctgatatcttctttgtcaaccacaggaagatg
acggagctcctctaccatctaactcggagcggccgcatggacgacctcatgtacggggtt
atcatgaacttcagctggctctacaccatgatcaagatagggcagtttgagaaggcactg
accgacatagatgtagcctacaactactcccaggagaaagaactcaagtttttggccacc
acgctgcgcagcatcaagatcaaagtgatgaagaacccggcatccctgtccgcagagctg
cagcagaggctcctccctgtggtcacctctttacccaagctccaacacctcctcctggaa
tgcgacaaggacggccccaaatactgctccattgtgcccctccactcctccatggatgtc
acctacagtcctgaaaggctgccgctgtgctccagctacatgcagatcgtggagatcctg
cccactctagcccccaacatcgtacttgtggccctggaggatgggtctgtgagcacatgg
gatgtggagagcaggcagctcctccggcagatagacacggcccattcggttgtcctggga
atcaggctaaccagcgacgagaagtacctggttgtggcaaccaccaagaacacgctactc
atatatgacaaccataaatcttgcttgctgtccgaagtggacatcaagaactccaagcac
tgtggtatcacaggaggggtggccttcatcaatgggttcaccctgtccagccatcatgcc
ttggcctggctagaggccagtaaagatgtcaatgtcatcgatctgctctacggctggccc
ctctacctgttccactgctggtatgaggtcacctgcgtccaatgctccccggatggaatg
tacgccttctgtggtcagtacctcaacaccacgtccatcttccacctggggactggggac
aagctagctacggtcacgtcggagttctccgggggatttgtcaagtccatcttggtcctg
gacaccattcaccagatggtgatgatcgataatgaggggagcctgtcggtgtggaacacc
aaagagatcaccaaccccagactgatggaagattatgactgccggggggatgagaacgag
gtcgtaggcattgagctgtcagaagaccagcgctccatcctcatctgcaaagacaagagc
attgaggtcctggacaccaagttgtggaagatggcagagaagttcaaggccaagcatgct
gagcgattcgtggctgcagtcctctcaaaaaatggccaaagtattgtggcctccatggag
aacacgtcatccatatttgtgtggaggagagacagtgggcagtgcatggccagcctgatt
gagatctctggggccatcgtcaaactcatcaagtccatccaccacaacctgctcctgtct
gtggccagcagtggagtgctatcagtctgggacattgacatcattacagccatgtccaac
attgacaaaacaggcaagaagattcagagcttacagctttctggcagggaggactttgtg
ttcaccatggacggctctgaagccatccacaagtggaacttcagcacaggcttcatagag
actgtcttcaagcatgagggcttggtggaaaactgtgtcctgacatcctctggggatctc
atggtgacgtcggatgataagtgcagccagtacatctggcacaccgccactggtgaaaac
atctttcgcatcaacggacagaagatatctcagctcctgatgacccacaatgaccagttt
gtggtttccctctgcgaacagaacgtctcccgagtctggaggctggccactggacacaag
gtgtgcaacatcctggtgaccctacagaatgcactgatcaccaccgcaaacaccttccta
gtggggatcacaaaaaacaagctgctcgctgttagcctctggtcaggcagtatttccaag
aagtttgtctgtgacgatggcattagcattatcaacttcaaactcattcctgactgccca
gactttgttgtcttcatcacatctacagagactgtgtttatatggagtgtggcagatgag
tctgtctgcagacgggtccagctgcctactaacttcctaaaaaatctggaggagttccaa
atttcaccaaatgggaaactgggaatcatctccaaaggtgacgagaacattaacgtgttg
gatcttcatagcgggaagctgagacttgtccacgccgccggtatcatctggcggcagaag
ctgtcgagggacgggcgctacctggtctatgtctgcttccggaacagtgatgagcatgac
gaggtgggcgtggtgtccaacctgatcgtgatgcgtctggcagatggaaagagcatcggg
acatgctccctctacaagacgcccaccttcctctgcctgtcccagcgagcgctcaacatc
atcattggcttcgaggatggcagcattggcacctatacggtggtggacagggtggacgcc
gcactcaagatcaagattgccacatccaacagtcggcagatcgtcaacaatgcctcacaa
aagataaggcccaagtgtggcaaccacgccttcaagaccattgcagactgcttgtggagg
gagtccaccgaggtcttctccagggatagccccatcaacgtgtctgactctggggaggat
gagaccaccatccccaccaaaaagaacgaactgttgcagtga
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integrated database retrieval system
