Oncorhynchus mykiss (rainbow trout): 110531957
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Entry
110531957 CDS
T07259
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110531957
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
General mRNP proteins
110531957
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
110531957
NCBI-ProteinID:
XP_036843740
Ensembl:
ENSOMYG00000031583
LinkDB
All DBs
Position
9:complement(34362170..34385873)
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AA seq
539 aa
AA seq
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MADDFDVEAMLEAPYKKTCLTISPLLSPFDSSEDCVLGGECKDEIKSSSANGNEERSSKK
KKRSHRRSSRSPSSDKCYSKDGKKSPEKKRSRSNERRRSGSRSREHAGRYRGRRGPFWKR
SRSCSPFKKDKSPLRKPIDNLTPEERDAHTVFCMQLAARIKPRDLEDFFSAVGKVRDVRM
ISDRNSRRSKGIAYIEFLDVNSVPLAIGLTGQRLLGVPIIVQAPQAEKNRAAAMANNLQK
GNAGPMRLYVGSLHFNITEDMLRGVFEPFGRIESIQLMNDSETGRSKGYGFISFADAECA
KKALEQLNGFELAGRPMKVGHVTERTDPSTASSFLDNDELERTGIDLGTTGRLQLMARLA
EGTGLQIPPAAQQALQMSGSIHSTPIHFVNMAAGTDIQASLNPPPEAPATLSLNLAPSMN
QAMTLSTQPLATHCLQLSNMFNPQLEKEPGWDVEIQDDVIEECNKHGGIVHIYLDKNSPQ
GNVYMKCPTIPTAMAVVNALHGRWFAGKMITAAYVPFPTYHNLFPDSVTAAQLLMPVRQ
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgactttgatgttgaggctatgctagaggctccatacaaaaagacttgccta
acgatatctcccctcctctcaccttttgattcgagtgaggactgtgtgttggggggagag
tgtaaggatgaaataaagtcctctagtgctaatggaaatgaagagcgcagtagtaagaag
aaaaagaggagccatcgtaggagtagtcgcagcccgagctctgacaagtgctacagcaaa
gatgggaagaagagtccggagaagaaacgcagccgcagtaacgaacgccggcgcagtggt
tcccgtagcagggaacatgctggacgctacagaggacgccggggccccttttggaaacgc
tcaagaagttgtagccccttcaagaaagacaagagtccattaaggaaaccaattgacaac
ctgaccccagaggagagggatgcccacactgttttttgtatgcagctggcagccagaatc
aaaccacgagacctagaggacttcttctcagccgtggggaaagtgagagacgtgaggatg
atctctgacagaaactccaggaggtcaaagggcattgcctacattgagtttctggacgtg
aattcagtcccgctggctattggcttaactggtcagagacttctgggagtgcccatcatc
gtacaggcccctcaggctgagaagaacagagctgcagcaatggccaacaaccttcagaag
ggtaatgctggccctatgcggctgtatgtgggctctctacacttcaacatcacagaggac
atgctgcgaggtgtcttcgagcctttcggaagaattgagagcatacaactgatgaatgac
agtgaaactggacgatccaaaggatatggtttcatctcatttgcagatgcagagtgcgct
aagaaggccctggagcagctgaatggctttgagctggccgggcggcccatgaaagttggt
cacgtgacggaacgcaccgacccctccaccgccagctccttcctggacaacgacgagctg
gagaggacaggcattgacctgggcaccaccgggcgcctgcagctcatggcccggctggca
gagggtactggtcttcagatccccccggctgcacagcaggctctacagatgagtggttcc
atccactcgactccaatccacttcgtcaacatggcagctggtacagacatacaagccagc
ctgaacccaccccctgaagctcctgccaccctttcactgaatcttgctccaagcatgaac
caggccatgaccctctcaacgcagccactggctacacactgcctacagctatccaacatg
ttcaaccctcagttggaaaaggaacctggctgggatgtcgagattcaagatgacgtcatt
gaggagtgcaacaaacacggtggaattgtccacatataccttgacaagaactcccctcag
ggcaacgtgtacatgaaatgcccgacaatcccaacagcaatggctgtagtgaatgcgcta
catgggcggtggtttgctggtaaaatgataactgcagcgtacgtaccttttccgacctac
cataacctttttcctgattcggtaactgcagcccagttattgatgcctgtgcggcaatga
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