Oncorhynchus mykiss (rainbow trout): 110531998
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Entry
110531998 CDS
T07259
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1 isoform X1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
110531998
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110531998
Transporters [BR:
omy02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
110531998
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
110531998
NCBI-ProteinID:
XP_021471238
Ensembl:
ENSOMYG00000038238
UniProt:
A0A060XH90
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Position
9:complement(37567212..37581804)
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AA seq
695 aa
AA seq
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MATNGTKTDGQVTELNEVATNDKPKSLDVKSDKTKKDLPERETWGGRFDFLLSCVGYAIG
LGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGMPLFLLETALGQYTSIGGLGVWKLAPVFK
GVGLAAAVLSFWLNIYYIVIIAWAIYYLYNSFTSELPWSSCGNSWNTEKCYSNYSIVDNT
NLTSAVMEFWERNMHQMTDGLEKPGQIRAPLAITLAIAWVLVYFCIWKGVSWTGKVVYFS
ATYPYFMLFILFCRGVTLPGAMDGILFYITPNFEKLKESEVWLDAATQIFFSYGLGLGSL
IALGSYNPFNNNVYRDSIIVCCINSFTSMFAGFVIFSIVGFMANVTKRPIEEVAASGPGL
AFLAYPEAVTQLPVSPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPRALRGRRELF
IAAVCLVSYLIGLSNITQGGLYVFKLFDYYSASGMCLLFLVFFECISISWFYGVNKFYDN
IQEMIGYKPCIWWKLCWVCFTPLIVAGVFLFSAVQMVPLTLNNYVFPAWGQGVGWLMALS
SMVLIPGYMVYMYLGLKGTWKERLRIMFQPPAVVRRPQENGPETVVAETNIASPSNAANP
TSPSNPVSPANPTATSPVAAAPANPAPPAIPAMASPVNPTSPTVPTVPTVPATPANPTSP
TSPPPNPVSPTAKETAIPPPNIVSSTNLTNAEANV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaacggcaccaaaacggatggacaagtaacagaacttaacgaagtggcaact
aatgacaaacccaagtcactggacgtgaaaagcgacaagacaaaaaaggatcttcccgaa
agagaaacctggggagggagattcgatttccttctgtcgtgtgtaggttatgcaattgga
ctcggaaacgtatggagatttccatatctctgtggaaaaaacggtggaggagccttcttg
atcccctattttttgacactcatattcgctgggatgccgctgttcctgcttgagaccgct
cttggtcaatacacttcaattggtgggcttggagtctggaaactggctcccgtgttcaaa
ggtgttggccttgcagcagctgtcctgtccttctggcttaacatttattacattgtcatc
attgcctgggccatatactatctctacaactcatttacctctgaacttccatggagctca
tgtggcaactcatggaacacagaaaaatgttactcaaactacagtattgttgataacacc
aatcttaccagcgcggtgatggagttttgggagcgcaacatgcatcaaatgaccgatggc
ttggaaaaaccagggcagatccgagcgccactggcaataacactggccatcgcttgggtc
ctggtttacttctgtatctggaaaggggtgagctggactggcaaggttgtgtacttctcg
gccacgtatccctatttcatgctattcattctgttctgccgtggagtgactctacctgga
gctatggatggcattctcttctatatcacccctaactttgaaaaactaaaagaatctgag
gtatggctggatgctgccactcagatatttttctcctacggtttgggactgggctcactg
atagctcttgggagctataacccttttaataataatgtttacagagactctatcatagtt
tgctgcatcaactccttcaccagcatgtttgctggctttgtcatcttctctattgtgggc
ttcatggcgaacgtgactaagaggcccatagaagaagttgcagcttcaggtccaggcctg
gctttcctggcctaccctgaggctgtgacccagctgcctgtctcccctctctgggctatc
ttgttcttctccatgctgctgatgctggggattgacagtcagttctgcacggtagagggc
tttatcacagctctggtggatgagtttcccagggcactgaggggcaggagagagctcttc
atcgctgctgtctgcctggtatcgtacctgatcggcctatccaacatcacacagggaggc
ctgtacgtgttcaaactcttcgactactactctgccagtgggatgtgtctcctcttcctg
gtcttcttcgagtgcatctccatatcctggttctatggtgtgaacaaattctatgacaac
atccaggagatgattggctacaagccctgtatctggtggaagctgtgctgggtttgtttc
acccctctcatcgtggccggggtgttcttgttcagtgcagtccaaatggttcctctcacc
ttgaacaactacgtgttccctgcctggggccagggagtgggctggctcatggctctgtcc
tccatggtcctcatccctggatacatggtctacatgtacctcggactcaagggcacctgg
aaagagcgcctacggataatgttccagcctcctgcagtggtccgacggccacaggagaac
ggacctgagacagtggttgccgagaccaacattgctagtccctctaacgcggccaaccca
actagtccatccaacccggttagtcctgccaatccaactgctacaagcccggttgctgca
gccccggccaacccagcacctccagccattccagctatggctagccctgtgaacccaact
agtccgaccgttccaactgtccctactgtccctgccactccagccaacccgaccagccct
accagcccaccacccaatccggttagcccaacggcaaaagagacggccatcccaccaccc
aacatagtgagctcaacaaacctgaccaacgctgaggcaaatgtctag
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