Oncorhynchus mykiss (rainbow trout): 110532004
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Entry
110532004 CDS
T07259
Name
(RefSeq) interferon regulatory factor 4 isoform X1
KO
K09445
interferon regulatory factor 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110532004
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
110532004
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
110532004
NCBI-ProteinID:
XP_021471249
Ensembl:
ENSOMYG00000038340
LinkDB
All DBs
Position
9:37721066..37729844
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AA seq
387 aa
AA seq
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MEKAGTNMHLREWLIAQIDSGKYAGLTWENQNKTMFRIPWKHAAKQDYNLNEDAALFKAW
AVYKGKYREGRDKADPTSWKTRIRCALNKSTDFQEVPERSQLDVSEPYKAYRIQTATRRC
SESPETESQAIIQTRSSSAHLRNTITHHPQFGCHRESEERDGRVNPSGGLDHVHYCSNTG
TPQMDSSATFSIFSPTPQISDFRVRVCLFYQDQLVVDVTTSTPDGCFILHGQVPLGNERI
YGPCTAQQVPFPPPGVIHLPPGIAEAMDRLLPHLERGVLVWVAPDGVFIKRFCQGRVYWS
GPLAQHTDRPNKLNRERTCKLLNASIFLKELQDFLKGAGPKPRYEIDLCFGEEFPDASPL
KTRKLIIAQVVPLFAVNLLQRCQRLGP
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggcaggcacgaacatgcatctgagagagtggctgatagcgcagatagacagt
ggaaagtacgcaggactcacctgggagaaccagaacaaaactatgttcaggatcccatgg
aaacacgcggcaaaacaggactataatctgaatgaagatgcagcccttttcaaggcgtgg
gcagtgtataaggggaagtatcgagaggggagggacaaggcagaccccacttcctggaag
actcgtatccgctgtgccctcaacaagagcacagacttccaggaggtcccagagcgcagc
cagctggacgtctccgagccctacaaggcctaccgtatccagacagcaacacgcagatgc
tcagaatctcctgaaactgaaagtcaggcgataatccagaccaggagctccagtgctcac
ctgaggaacaccatcacacaccatccacagtttggctgccatagggaatcagaggaaagg
gatggaagagtcaaccccagtgggggtttggaccatgtacactactgttccaacacaggg
actccccagatggacagctctgctaccttctccatattcagccccacaccacagatctct
gacttccgtgtgcgggtgtgtctgttctaccaggaccagctagtagtggatgtgaccacc
agcaccccagatggctgtttcattctacatggtcaggtgcccctggggaacgagaggatc
tatggcccctgcacagcccaacaggtccccttcccccctccaggggtcatccacctgccc
cccggtatcgctgaggccatggaccgcctgctgccccacttggagaggggtgtcctggtg
tgggtggctccagatggggtgtttatcaagaggttctgccagggcagggtgtattggagt
ggccctctggcccagcacacagacaggcccaacaagctgaacagagagaggacctgcaag
ctgctgaatgcatctatatttctgaaggagcttcaggactttctcaagggggcgggaccc
aaacctcgctatgagattgacctctgctttggggaggagtttcccgacgccagccccctg
aaaaccaggaagctgatcattgcacaggtagtgcccctgttcgctgtcaacctattgcag
aggtgccagaggttggggccataa
DBGET
integrated database retrieval system
