Oncorhynchus mykiss (rainbow trout): 110532008
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Entry
110532008 CDS
T07259
Name
(RefSeq) calcium-responsive transactivator isoform X5
KO
K15623
protein SSXT
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110532008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110532008
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110532008
GBAF(ncBAF) complex
110532008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
110532008
NCBI-ProteinID:
XP_021471265
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Position
9:complement(37961139..37977349)
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AA seq
416 aa
AA seq
DB search
MSVAFSSARPRSKGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTSECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTPNMGSIGAGGMGQSGGRGPLHSQSNLNDTMTPGLPPTSML
QSQMSNGPSHAPMQQQAGQTQSAGPSSTSLSLPASTHGSASGYSHPVPPSSQGSMIQGLG
PDYGSSSSSSTSSRSNLNMQSNTVSMMHQQSATPHYPSTQTGGGQQQYQGQQAAMGMLGQ
SGQGNNMMSQRPMGTYRPTQQGSAPQYMGQDDFYGEQYGHTQSSSEPINQQYYSDGHGEY
SYQQSSYGEQGYERSFDESSQHYYEGGNSQYSQQQAQYQQGSGQQQPFSQQQYPSQQGYS
GQPQGYGPGQGAQSQYSQYQQGQGQQYSSYRSQASSGAQTQRPYAYEQGQYGNYQQ
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcattttcatcggcgcgcccaaggagcaaaggggaggtgacacagcaaacg
atacaaaagatgctggatgaaaatcaccatctgatacaatgcataatggattaccagagc
aaaggaaaaacatcagaatgcacacagtatcagcagatccttcacagaaacctagtctat
ctggccacgatagcagattctaatcagaacatgcagtcattgttacctgcacctcctaca
cctaacatggggagtataggtgctggaggaatgggacagagcggaggcagagggccccta
cactcccagagtaacctcaacgacaccatgacccctggcctgccccctacctctatgttg
cagagtcagatgagcaatggccccagccacgctcccatgcagcagcaggcgggtcagaca
cagtcggctgggccctcatccacgtccctcagcctgccagccagcacccacggctcagcc
tccggctacagccaccccgtgcccccctcctcccagggcagcatgatccagggccttggc
ccagactacggttcttcctcttcctcttctacctcctcccgcagcaacctcaacatgcag
tctaacacagtctccatgatgcaccagcagtcagcaacacctcattacccctcaacccag
actggtggcggacagcagcagtaccagggtcagcaggccgctatgggcatgttggggcag
agcggacaaggcaacaacatgatgagccagaggccgatggggacctaccgacccacacag
caaggatctgcaccgcagtacatgggacaagacgatttctacggagagcagtacggacac
actcagagctccagcgagcccataaaccagcagtattactctgatggtcatggggagtac
tcctaccaacaatcatcctacggtgaacagggctatgagaggtcctttgatgagtcctca
cagcactactacgaaggaggcaactcccagtacagtcagcagcaggcccagtaccagcag
gggtcaggccagcagcagcccttcagccaacaacagtacccctcacagcagggctacagc
ggacagccacagggctacggtccaggtcagggagcgcagtcccagtactcccagtaccag
cagggtcagggccagcagtacagctcctaccgctcccaggcttcctctggggcacagaca
cagaggccctacgcctacgaacagggtcaatatggaaactaccagcaataa
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