Oncorhynchus mykiss (rainbow trout): 110532018
Help
Entry
110532018 CDS
T07259
Name
(RefSeq) fibrillin-2-like isoform X1
KO
K23342
fibrillin 2/3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110532018
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
omy00536
]
110532018
Glycosaminoglycan binding proteins [BR:
omy00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110532018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
EGF
FXa_inhibition
TB
hEGF
EGF_3
Fibrillin_U_N
Plasmod_Pvs28
EGF_FBN_1st
EGF_MSP1_1
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
110532018
NCBI-ProteinID:
XP_036821226
Ensembl:
ENSOMYG00000006445
LinkDB
All DBs
Position
1:19977844..20093947
Genome browser
AA seq
2894 aa
AA seq
DB search
MGAGKLARVLLGWAAVCLASVHTAYGQAGDGGYQASRFTGKVDEREVQRVRRRGQETLRG
PNVCGSRFHSYCCPGWKTLPAGNQCIVPICRNSCGDGFCSRPNMCTCGSGQLSPSCGAGA
GVQSCNVRCMNGGSCQEDSCSCQKGYTGNHCGQPVCENGCQNGGRCIGPNRCACVYGFTG
PQCERDYRTGPCFTQVNNQMCQGQLSGIVCTKTLCCATIGRAWGHPCEMCPAQPHPCRRG
FIPNIRSGACQDVDECQAIPGLCAGGNCINTVGSYECKCPAGHRQSDTSHKCEDIDECST
IPGVCDGGECTNTAGSYVCTCPRGYITSTDGARCVDQRVGTCFSALANGRCAGDLQGQYT
KMQCCCDTGRCWASGQIPEMCPVRGSDEYRRLCIEGVPHGTGNGGFPHGVFPNGGGYPNG
GGNGHGYSYGYKLNPNGNGHHGNGGGIGGGGIGGGGQGAGGNGFGGNGGGRNIVSVSVNE
TVDVCKHFTNLCLNGRCIPTPTSYRCECNMGYRQDVRGECIDVDECVSNPCVNGDCVNTP
GSYHCKCHEGYQGTPTKQACIDIDECIVNGVMCRNGRCVNTDGSFQCICNAGFELTPDGK
NCIDHDECATTNMCLNGMCINEDGSFKCICKSGFALAPNRRYCTDIDECQTPGICMNGRC
INSEGSFRCDCPPGLAIDVDGRVCVDTHMRTTCYGAIKMGTCSRPFPGAVTKSECCCASP
EHGFGEPCQPCPARNSAEFQAVCSSGIGITADGRDINECALDPDICQNGMCENLRGSYRC
ICNIGYESDSSGKNCVDINECLVNRLLCDNGLCRNTPGSYTCSCPKGFVFKPDSETCEDI
NECESSPCVNGVCRNIAGSFNCECSHGSKLDSTNTICVDSMKGTCWLNIQDGRCEVNING
ATLKSECCSTLGAAWGSPCERCEIDTACSRGFARMKGVNCEDINECEVFPGVCTNGRCVN
TQGSFRCECGEGLTLDGSGRTCVDVRSEQCYMKWHEDECGEPLPGRYRVDMCCCSVGAAW
GIDCEECPKAGTPEYKAICPRGPGFANRGDILTGRPFYKDVNECKVFSGLCSHGTCRNTI
GSFKCRCSSGFALNMEERNCTDIDECHISPDLCGHGTCVNSPGSFECECFEGYESGFMMM
KNCMDFDECERNPLLCIGGTCLNTEGSYECECPPGHQLSPDGTSCEDVNECQLSDNLCKN
GHCVNMVGNYQCSCDTGYQVTPDRQGCVDIDECTIMNGGCDTHCTNSEGSYECSCSEGYA
LMPDLRTCADIDECEDSPDICDGGQCTNVPGEYRCLCYDGFMASMDMRTCIDVNECELNP
NICLHGDCENTKGSFICHCQLGYFVKKGSTGCTDIDECEIGAHNCDMHAACLNVPGSFKC
RCRDGWVGDGIKCVDVDECSTEEHNCNLNADCVNTPGSYRCACKEGFNGDGFSCSDMDEC
ADNVNLCENGQCLNAPGGYRCECEMGFTPTEDSKACQDIDECNFQNICVFGTCQNLPGMF
RCVCDDGYELDRSGGNCTDINECADPVNCINGLCVNTPGSYLCNCPPDFELNPTGVGCVD
TRVGNCFLDTLARGDGGISCSAEIGVGVTRASCCCSLGGAWGNPCELCPPINSTEYKTLC
PGGEGFRPNPITVILEDIDECQELPGLCQGGNCVNTFGSFQCECPAGYYLNEETRICEDI
DECTAHIGICGPGTCYNTLGNYTCVCPPEYMQVNGGNNCMDMRKSVCYRNFNDTCENELS
FNMTKKMCCCAYNVGKAWNKPCEACPTPATSEYQLLCGNQAPGFIIDIHTGKPIDIDECR
EIPGICANGVCINQIGSFRCECSVGFSYNNILLICEDIDECNSGDNLCQRNANCINIPGS
YRCECSPGFKLSPSGACVDRNECQEIPNVCSHGECIDTQGSYRCLCHNGFKATADQTMCM
DIDECDRQPCGNGTCKNTVGSYNCLCFSGFELTHNNDCMDIDECSALVGQVCRNGQCING
LGSFQCLCQEGYELTLDGKNCVDINECVSLPGTCSPGICQNLDGSFRCICPAGYEVQNDQ
CIDINECEVEPNICQFGTCTNTPGSFQCICQNGFVLSDNGRRCFDTRESFCFTRFESGKC
SVPKAFNTTKAKCCCSKMPGEGWGDPCELCPREFEAAFDSLCPYGHGALPGRGDAREDMN
ECLDNPGVCQNGVCINTDGSFRCECPFGYNLDYTGINCVDTDECSIGNPCGNGTCTNVLG
GFECSCHEGFEPGPMMTCEDINECSLNPLLCAFRCVNTFGSYECMCPSGYVLRDDLRMCR
DQDECSEGLDDCESKDMSCKNLIGTFMCICPPGLQRRPDGEGCMDLNECRAKPGICKNGR
CENTVGSYRCVCNEGFQPSSTGTDCIDNRQGFCFTEVLQTMCQQGSTNRNSVTKSECCCN
LGRGWGPQCELCPLPGTVQYKRMCPLGPGYTTDGRDINECTVMPDLCKNGQCINTIGSFR
CHCNVGYTTDFTGTSCIDMDECSASPKPCNFLCKNTEGSYLCSCPRGYTLQPDGKTCKDL
DECSTKQHNCQFLCVNTIGGFTCKCPAGFTQHQTACIDNNECNGQNSVCGSRASCVNTPG
SFNCDCGKGFSLDTTGLECEDVDECGSNHRCQHGCQNMMGGFRCGCPQGYVQHYQWNQCV
DENECSGVSVCGSASCYNTLGSFKCVCPSGFDFELGGGGCQDVNECSMGSNPCSFGCSNT
DGGYLCGCPGGYYRAGQGHCISGQGFQDHFSSEGDDEDSLSPEACYECKINGDVGKKGRH
RRHSAGDNDLKEVSMASLDTQESIPMNLSLASLHNKEPLLELLPALEPLEHHVRYVITHG
NQDEHFRLLERHNGKSVLRLGRKPPPPGSYRLEIASLPLFGPRRLRQLEEEHDSDYLLGE
IGDALRIKLHIHLN
NT seq
8685 nt
NT seq
+upstream
nt +downstream
nt
atgggagcagggaagctggcccgggtgctgttgggatgggcggccgtgtgcttggcctcg
gtccacactgcgtacggccaggcgggagacggagggtaccaagccagccgcttcacagga
aaggtggacgagagggaggtgcagagggttcgcaggagaggacaggagacactcagaggg
cccaatgtgtgtggctctcgcttccactcctactgttgccctggctggaagacgctccct
gcagggaaccagtgtatcgtcccaatctgccgtaactcgtgtggtgatggcttctgctcc
agacccaacatgtgcacttgcggcagcggccagctctcccccagctgtggggccggtgcc
ggagtgcagagctgtaacgtcaggtgtatgaacggaggcagttgccaggaagactcctgc
tcctgtcagaagggttacaccggcaatcactgtggacagcctgtgtgtgagaatggttgc
cagaacggagggcgctgtattgggcccaacagatgtgcctgtgtctacggcttcactggc
ccgcagtgcgagagagactacaggaccgggccctgctttacgcaggtcaacaaccagatg
tgccagggccagctgagtggcattgtgtgcaccaagaccctgtgctgtgccaccattgga
cgggcatggggacacccctgtgagatgtgccctgcacagcctcacccctgtcgccgaggc
ttcatccccaacatccgcagtggagcgtgccaggatgtggatgagtgtcaggccatccct
gggctgtgtgcaggaggtaactgtatcaacacagtgggctcctatgagtgtaaatgtccc
gcgggccatcgccagagtgacaccagccacaagtgtgaagatattgacgagtgcagcact
atcccaggtgtgtgtgacggaggtgaatgcaccaacacagccggtagctacgtctgcacc
tgtccccgtggttacatcacaagcactgacggtgccagatgtgtagaccagcgtgtgggc
acgtgtttctcggcgttggcgaacgggcgctgtgcgggtgacctgcagggccagtatacc
aagatgcagtgctgctgtgacacgggccgctgctgggcttctggacagatccctgagatg
tgccctgtcaggggatccgatgagtacagaaggctgtgcatcgagggggtgccccatgga
acaggtaacggaggtttcccccacggagtcttccccaatgggggcggctaccccaacggc
ggcggcaacggtcacggttacagctacggctacaaactcaaccctaacggaaacggtcac
catggcaacggaggaggaatcggaggaggaggaatcggaggagggggacagggagcagga
ggcaatggttttggaggaaacggcggcgggcgtaatatcgtctctgtgtcagtcaatgag
accgttgacgtgtgtaaacatttcaccaacctgtgtttgaacggccgctgcatccccacc
ccgaccagctaccgctgtgaatgtaacatgggctacaggcaggacgtacgcggggagtgt
attgatgtggatgagtgcgtcagcaacccttgtgtcaacggagactgtgtcaacacacct
ggatcgtaccactgcaagtgccacgaaggctaccagggcacccccaccaaacaggcctgc
attgatattgatgagtgcatcgtgaatggagtgatgtgtcgtaacggacgttgtgtcaac
actgacggaagcttccagtgcatttgcaacgctggctttgagctcactccggatgggaag
aactgcatagatcatgatgagtgtgccaccaccaacatgtgtctcaatggaatgtgtatc
aacgaggacggtagcttcaagtgtatctgcaaatctggcttcgccctggcacctaacaga
cgttactgcacagacattgatgagtgccagacaccaggcatctgtatgaacggacgctgt
atcaattctgagggctccttccgctgtgactgcccaccaggcctggccatcgatgtggac
gggagagtgtgtgtcgacacacacatgcgtaccacctgctacggtgccatcaagatgggc
acgtgctcgcgtcccttccctggcgccgtcactaagtctgagtgctgctgtgccagtcct
gaacacggcttcggagagccctgccaaccctgccctgcccgcaactcagctgagttccag
gccgtgtgcagcagtgggattggcatcaccgctgacggcagagacatcaacgagtgtgcc
ttggaccctgacatctgtcagaacggcatgtgtgagaacctgagagggagctaccgctgc
atctgtaacatcggctacgagtccgactccagcggcaagaactgcgtggacatcaatgag
tgcctagtgaaccgtctgctgtgtgacaacggcctgtgtagaaacacccccggcagctac
acctgctcctgtcccaaaggcttcgtcttcaaacctgactctgagacctgcgaagatatc
aacgagtgtgagtccagcccgtgtgtcaacggagtctgccgcaacatcgccgggtccttc
aactgcgagtgttcccacggcagcaagctggactccaccaacaccatctgcgtggacagc
atgaagggaacgtgctggctgaacatccaagatggccgctgtgaggtcaacatcaacggt
gccacgctcaagtccgagtgctgctctacactgggagctgcctggggcagtccctgtgaa
cgctgcgagatcgacactgcctgctctagagggttcgctcgtatgaaaggagtcaactgt
gaagacatcaatgagtgtgaggtgttcccgggggtgtgtaccaacgggcgctgtgtcaac
acccagggctccttccggtgtgagtgtggcgaggggctcactctggacgggagtggacgc
acatgtgtggacgtgcgcagtgagcagtgctacatgaagtggcacgaggatgagtgtggc
gagccgctgcccggtcgctaccgcgtggacatgtgctgctgctccgtgggcgcggcctgg
ggcattgactgtgaggagtgtcccaaggcgggaaccccggagtacaaggccatctgcccc
agaggaccaggctttgccaaccgaggagacatcctgactggcagacccttctacaaagat
gtgaatgagtgtaaggtgttcagcggcctgtgctcccacggaacctgccgcaacaccatc
ggcagcttcaagtgtcgctgcagcagcggcttcgccctcaacatggaggagaggaactgc
acagatattgatgaatgtcatatctctccggacctgtgtggccacggcacctgcgtgaac
tcccctggcagctttgagtgtgaatgcttcgagggctatgaaagtggcttcatgatgatg
aagaactgcatggattttgatgagtgtgagcggaaccctctgctgtgtataggaggcacc
tgtctgaacacagaggggagttatgagtgtgaatgtccccccggacaccagcttagtccc
gatggtacctcctgcgaagatgtgaacgagtgccagctgagtgacaacctgtgtaagaac
ggccactgtgtcaacatggtggggaactaccagtgctcctgtgacactggttaccaggtt
acaccagacagacagggctgtgtggatattgatgagtgtaccattatgaacggaggctgt
gacacacactgtaccaactcagagggcagctacgagtgcagctgtagtgagggatacgct
ctcatgcctgacctcaggacctgcgctgatatagatgagtgtgaggacagccctgatatc
tgtgatggaggccagtgcaccaacgtgcctggagagtaccgctgtctctgctacgacgga
ttcatggcctccatggacatgaggacctgcatcgatgtgaatgagtgtgagctgaaccct
aacatctgtctgcatggggactgtgagaacaccaagggatccttcatctgccactgccag
ctggggtactttgttaagaagggctccaccggctgcacagatattgatgagtgtgagatt
ggggctcacaactgtgacatgcatgctgcctgtctcaacgttcccgggagcttcaagtgt
cgttgtcgtgacggctgggtgggagacggcatcaagtgtgtagacgtggatgagtgttcc
actgaggagcacaactgcaatctcaatgcagactgtgtcaacacccccggctcctaccgc
tgtgcctgcaaggagggcttcaacggggatggcttctcctgttctgatatggatgagtgt
gctgacaacgtgaacctgtgtgagaatggccagtgtctgaacgctccggggggctaccgc
tgtgaatgtgagatgggcttcacccccaccgaagacagcaaggcctgccaggatattgac
gaatgtaacttccagaacatctgtgtgtttggaacgtgtcagaatctaccggggatgttc
cggtgtgtgtgtgacgacgggtacgagctggaccgcagcggaggaaactgcactgacatt
aacgagtgtgcggaccctgtgaactgcatcaatggcttgtgtgtgaacacacccggaagc
tacctgtgtaactgccctccggacttcgagctcaaccctactggagtgggctgtgtggac
acgcgagtgggcaactgtttcctggatacgttggctcgcggcgacgggggcatctcctgc
agcgctgagatcggcgtgggcgtcacccgcgcctcctgctgctgctccctgggaggagcc
tggggaaacccctgtgaactctgccccccaatcaactccaccgagtacaagacactgtgt
cctggaggagagggcttcagacccaaccccatcactgtcatcctggaagacattgatgag
tgtcaggagctgccaggcctgtgccagggtggtaactgtgtcaacaccttcggcagcttc
cagtgcgagtgccctgcaggctactacctcaacgaggagacacgcatctgcgaggatatt
gatgagtgcacagcccacattggaatctgtggccctggtacctgctacaacaccttgggg
aactatacctgcgtgtgtcctcctgagtacatgcaggtcaacggaggaaacaactgcatg
gatatgaggaagagcgtgtgttaccgcaactttaacgacacgtgtgagaacgagctgtcg
ttcaacatgaccaagaagatgtgctgctgtgcctacaacgttggcaaggcctggaacaag
ccctgtgaagcctgccctacccctgccacctcggagtaccagttactgtgtgggaaccag
gctcctgggttcatcatagatatccacacaggcaagcccatcgatattgatgagtgtcga
gagattccggggatatgtgccaacggagtgtgtatcaaccagataggaagcttccgctgt
gaatgttctgtgggtttcagctataacaatatactgctcatctgtgaagatattgacgag
tgtaacagtggagacaacctgtgccaacgcaacgccaactgtatcaacatcccagggagc
taccgctgcgagtgctcgccaggcttcaagctgtcccccagcggggcctgcgtggaccgt
aacgagtgccaggagatccctaacgtgtgtagccacggagagtgtatcgacacccagggc
agctaccgctgtctctgccacaacggattcaaggctaccgccgaccagaccatgtgcatg
gatatcgatgagtgcgacagacagccgtgtgggaacggaacctgtaagaacacagtgggc
tcctacaactgtctctgcttctctggcttcgagctcacgcacaacaatgactgcatggac
attgatgagtgcagtgcgttggtgggtcaggtgtgtaggaatggccagtgtatcaacggc
ctgggctccttccagtgtctctgtcaggaaggctacgaactcaccctagacggaaagaac
tgtgttgatatcaatgaatgtgtgagtcttcctgggacctgctctcctggaatctgtcag
aacctggatggatctttccgctgtatctgcccagctggatacgaagtccagaacgatcag
tgtatagatatcaacgagtgtgaggtggagcccaatatctgccagtttggcacgtgcacc
aacaccccaggaagcttccagtgtatctgccagaatggcttcgttctgtctgacaatgga
cgccgctgctttgatactagagagagcttctgcttcacccgctttgagtctggcaagtgt
tctgtacctaaagccttcaacaccaccaaggccaagtgctgctgcagcaagatgccaggc
gagggctggggagacccctgcgagctgtgcccacgcgagttcgaggcagcctttgacagc
ctgtgtccctacggccatggagccttgcctggacgaggggacgcccgtgaggatatgaat
gagtgtctggacaacccaggcgtctgtcagaacggtgtctgtatcaacacggatggatcg
ttccgctgcgagtgtcccttcgggtacaacctggactacactgggatcaactgtgttgac
actgatgagtgctctataggaaacccctgtggtaacgggacctgtactaacgtgttggga
ggcttcgagtgctcctgtcatgaaggcttcgaacccggacctatgatgacctgtgaagat
atcaacgagtgttctctgaaccccctgctgtgtgccttccgctgtgtcaatacttttggt
tcgtacgagtgcatgtgtccctcgggctacgtgctgcgagatgacctccgcatgtgcaga
gaccaggatgagtgttcagaggggctggatgactgtgagtccaaggacatgtcctgtaag
aacctgattggcacctttatgtgtatctgcccccctggcctgcagcgcagacctgacgga
gagggctgcatggacctgaatgagtgtcgtgcaaagcctggcatctgtaagaacgggcgc
tgtgagaacacagtgggaagctatcgctgtgtgtgcaacgagggcttccagcccagctcc
accggaacggactgtatcgataaccgacagggcttctgtttcaccgaggtgctccagact
atgtgccagcagggctccaccaataggaacagtgtcaccaaatctgagtgctgctgcaac
ctcggacgtggctggggaccccagtgtgaactctgccctctgcctggcaccgtgcagtac
aagaggatgtgcccactgggacccgggtacaccaccgacggcagagacatcaatgagtgc
acggtgatgccagacctgtgtaagaacggccagtgcatcaacaccatcggatcgttccgc
tgccactgcaacgtgggttataccaccgacttcaccggcacctcctgcattgatatggat
gagtgttccgcatctcccaagccctgtaacttcctgtgtaagaacacagagggcagctac
ctgtgctcctgccccagaggatacactctgcagcctgacggaaagacctgcaaagatctg
gatgagtgttccaccaagcagcacaactgtcagttcctgtgtgtcaacaccatcggaggg
tttacatgcaagtgtcctgcaggtttcacccagcaccagaccgcctgcattgacaacaat
gaatgtaatgggcagaacagtgtgtgtggctccagagcctcctgtgtcaacactcccggc
agcttcaactgtgactgtgggaaaggtttttctctggacaccactggcctggagtgtgaa
gatgtggatgagtgtggtagtaaccatcgctgtcagcatggctgtcagaacatgatggga
ggtttccgctgtggctgtcctcagggctatgtgcaacactaccagtggaaccagtgtgtg
gatgagaacgagtgttcgggtgtgtctgtgtgtggctcggcctcctgctacaacaccctg
ggcagctttaagtgtgtgtgtccatccggttttgactttgagctgggagggggtgggtgc
caggatgtcaatgagtgttccatgggcagtaacccctgcagtttcggctgctccaacaca
gacggaggatacctgtgtggctgtcctggaggttactacagggctggacagggtcattgt
atttcaggtcagggcttccaggaccactttagctcagagggagatgatgaggacagtctg
tctccagaggcctgctacgaatgtaagatcaacggagacgtcggcaagaagggccgacac
agacgtcactctgctggagacaacgacctcaaggaggtgagcatggccagcctagacacc
caggagtccatccccatgaacctgagcctggcctcgctgcacaacaaggagcccctgctg
gagctgctgccggccctggagcccctggagcaccatgtgcgctacgtcatcacccacggc
aaccaggacgagcacttccgcctgctggaacgccacaatgggaagagcgtgctgaggttg
ggcaggaagccacctccccctggctcctaccgcctggagatcgctagtctgcccctgttc
gggccgcggcgcctccgacagctggaggaggaacacgacagcgactacctgctgggagag
ataggagacgccctgcgcatcaagctgcacatccacctgaactga
DBGET
integrated database retrieval system