KEGG   Oncorhynchus mykiss (rainbow trout): 110532058
Entry
110532058         CDS       T07259                                 
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110532058
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110532058
   03036 Chromosome and associated proteins [BR:omy03036]
    110532058
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110532058
Chromosome and associated proteins [BR:omy03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    110532058
SSDB
Motif
Pfam: WD40 WDR55 Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_RFWD3 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_EIPR1 eIF2A WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_Nup120_160 WD40_MABP1-WDR62_2nd Exonuc_X-T_C Beta-prop_SPT8
Other DBs
NCBI-GeneID: 110532058
NCBI-ProteinID: XP_036843861
Ensembl: ENSOMYG00000043721
UniProt: A0A8C7U8Y1
LinkDB
Position
9:40086011..40090648
AA seq 372 aa
MSLFGTSTGFGAGGFGAATTDTHNPMKDVEVTSPPDDSISCLAFSPPAMPGNFLIGGSWA
NDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSEDGSKVFTASCDKTAKMWDLNSNQAIQI
AQHDAPIRTVHWIKAPNYNCIMTGSWDKTLKFWDTRSPNPMMSLQLPERCYCADVVYPMA
VVASAERGLIVYQLENQPSEFRRIDSPLKHQVTGFTYQHRCIAIFKDKQNKPAGFALGSI
EGRVAIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLATVGSDGR
FSFWDKDARTKLKTSEQLDQPITACSFNNNGNIFAYASSYDWSKGHEYYNPQKKNYIFLR
NATEELKPRNKK
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgagcttgtttgggaccagcactgggtttggcgcagggggattcggagcggcaaccacg
gacacacacaacccaatgaaggatgtggaagtaacctcacccccagatgacagcatcagt
tgcttggcgtttagtccccctgccatgccagggaacttcttgataggggggtcctgggcc
aatgatgtgaggtgttgggaggtacaggacaatgggcagacagtccccaaagcccagcaa
atgcacacaggtccagtccttgatgtctgttggagcgaagatggaagcaaggttttcact
gcatcttgtgataagactgccaaaatgtgggatctcaacagcaaccaggcaatacagatc
gcacagcatgatgctcctatcagaacagtccactggatcaaagcccccaactacaactgc
atcatgacaggcagctgggacaaaactctgaagttctgggacacccgttcgcccaaccca
atgatgtccctgcagctgccggagaggtgctactgtgcagacgtggtgtatcccatggca
gtggtagcatcggcagagcgaggtttgattgtatatcagcttgagaaccagccgtccgag
ttcaggaggatagactcaccactcaaacaccaggtgactggtttcacataccagcaccgc
tgcatagccatctttaaggacaaacagaacaagcctgctggatttgctcttgggagcatt
gaagggcgggtcgccattcactacatcaaccctcctaacccagccaaggataacttcacc
ttcaagtgccacaggtcgaatggaaccaacacaaccacaccacaagacatctatgctgtg
aatgccatctccttccaccctgtccacggtacactggcgactgttgggtctgacggtcgc
tttagcttctgggataaagacgctcgcaccaagctgaagacctcggagcagctggaccag
ccaatcacagcttgctcgttcaacaacaacggcaacatctttgcctacgcctctagctat
gactggtcaaaggggcatgagtactacaaccctcagaaaaagaactacatcttcctgcgt
aatgctactgaggagctgaaacctcggaataagaaatga

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