Oncorhynchus mykiss (rainbow trout): 110532307
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Entry
110532307 CDS
T07259
Name
(RefSeq) neural-cadherin-like
KO
K27892
neural-cadherin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110532307
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Cadherin related
110532307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
Cadherin_CELSR2_9th
EGF
hEGF
EGF_Teneurin
Big_9
cEGF
Motif
Other DBs
NCBI-GeneID:
110532307
NCBI-ProteinID:
XP_036845473
LinkDB
All DBs
Position
1:41813183..41874983
Genome browser
AA seq
2325 aa
AA seq
DB search
MPEWSRLEAREEPFEPGDRLQATHVATVTATAGGDESPISVLLYRTFVSEDAGPNTLVAT
VLAKDPDGDGIVYSFTAGNEEGNFVIDSQKVLGLIRLRSTPPPKLQGLEYVLNVTATDDN
ASGGPHPLSATARVIVGVDDVNNNKPIFEKCQKYREQASVLENQPTGTFVLQVHAVDADE
GANGKVKYGLMHRDRAMPAFRVHPDTGVIVTARRFDRERQREYSITVTATDWADEPLIGI
CQLNVLIQDHNDNSPKFENLRYEYFLREDTMIGTSFLRVAAHDDDFGTNAVVTYSMSQEQ
PEYLRVNPVTGWVYVNQPISQRSYITREVVATDGGNRSTSVELSVTITNVKNQPPQWEKD
SYSVVIPENTARDTSIVTIKATSLLGDPRVTYNLEEGVVPETNMPVRFYLSPNREDGSAS
ILVSEPLDYETTPSFSLRVRAQNVAAVPLAAFTTIYVNVTDVNDNVPFFTSSIYEASVTE
GATVGTMVLQVSAHDKDLGLNGQITYSLLSDSSGDHRLFRVDPELGSIYTKAVFDREAQG
SYLLEVQSEDGMESARPGRNKQPNFDTAYVRVFISDVNDNKPVFAQRLYEVGIDEDADVG
LAVVTVGANDEDEGANAKLRYQITSGNTGGVFDMEPEVGTIFIAQPLDYELQKRYKLLVL
ASDGKWEDYAAVVVNVVNKNDEAPVFSMNEYYGSVTEELDGSPVFVLQVTAIDPDKDADQ
VAVRYSLHGQGSESKFVIDEITGKMYAQKTLDREERAVWRFVVLATDEEGEGLTGFTDVI
INVWDINDNAPSFVCVPDGCHGNVGENSPPGTFVMEMTATDLDDTAVGQNAILSYRIIEN
VHDAGAANFFTVDASTGTISVATGGLDREVAERHQLVVEAKDGEGMMGTATATIIITDLN
DHTPRFKDKWCSARVSESSPPDSTVLKLDAVDPDSGPHGLLGFSVVAGDQGERFYMVSHK
AEQSGTLRLRKRLDYERPGEQQFNLTIRVEDSDFSSLIHCIIQVLDENDHVPVFAPTSYP
LAPLPEDIAVGTSITQVTASDSDSDLNGEIIYSISPESDPYGHFTVDGNGIMTVTCPLDR
EIVAEYQLVVLATDRGSPALTGSTTIQLSLLDVNDNGPELEVNYNPVLWENSPAPQVVWL
NQTSTLLHVIDRDSLENGPPFSLSLPRLYAPDFHLQDHGDGTATLTALHRFDRERQREFF
LPVVMTDSGRPPMTVTNTLTVTVGDQNDNAHQEGEKEIYVHSRRGKMQTTSLGKVYAPDP
DDWDNKTYTLDARGMKYFTLDKSTGHLAIRQNTLAGSYYLRVGVSDGVWPDVVSGVTVHV
RELEDQAIHLSASLRLTGITARDFIESQVDKTSRQDMFRGFLSEHLAVRLGAINVFSLTD
VGLKTLDVRFSVHSDSYLRPEKLHGFLAVHKKKLQSLLRVNVSQVQVDECVYTDCRAGGG
CSTYLSVSDTPTLVDAGNMALVSVTVTSSAVCGCTARDRVHQACSSYATNPCFNGGTCMD
TLSGYRCQCPPQYEGPECQQTRRSFLGNGYAWFPPIRPCFDSHLSLEFITGAEDGLLLYS
GPLATLLPRDPEDYMAIELIGGTPSLKINHGSGTLVLQLPGNVVVSDRRWHRLDVRSNSK
EVRFTLDRCSSAIVMETEGVDSWAMTEDRSSCEVRGVTPNRDRYLNGSQVLQLGGVNENM
SYEYPQLQHKHFTGCLRNLVVDSMLYDLGYPSESSSSAPGCSLTDGNCVNMGVPACGARG
RCNGQWDSFRCQCGPGYTGIHCEDEVPEFSFDGRRSHVQYQVGWSLPARHTSVQLQVRTH
VPSGVLLSLFSQEQNEYLRLEVFQGLLAVFYNLGDRLYNLTLPFQRLDNGEWHEVELDRH
GKEFTLRLDGGGGRQEVTAAPGQSQEIVIDQTVVMLGNSFPSGNNHSFLGCLRDLRLNGR
PMPMAKQPSVGSKGLQVVTSQGVSPGCPSDACRKHQCYPPFICVDLWRKHECRCPPGHMT
KENDSSKVCVYTLCVSRPCRHGTCVAHSPAKYSCHCSEGYRGRHCEVSLTLYHNNDNNTL
SLSSAFAISICVLAFLVLMLGLSLYSCWRRHKGLKEGIYHVSAHHGEWEDIRENVLNYDE
EGGGEQDQNAFNMVELQRSLRPSPAQSLWYSYPQCIIPSSYPQTTKPPDTKNGTKPKGPN
GPKNGSTAIALRLAHPPSGSATLTSPIAMRRSHKSLSFSSQDLARYLCEVIRDTDHSTGD
NPGYMTSLRPLSNKAQRGRLAVRSLSSLSDEGQGSEVRVHGGQESLKGQRSQSPRLDRLK
ALRAVASELRVDGAVDSAAAKSTEGQKDKVKDRECRAQPNCEKSG
NT seq
6978 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagtggtcccgtctggaggcgcgtgaagaaccttttgagccgggtgacagatta
caggccactcatgttgccacggtgactgccacagctggcggagatgaatcacccatcagc
gttcttctctatcggacttttgtctccgaggacgctggccccaacacactagttgccacg
gtactggctaaggacccagacggtgatggaatagtgtactcatttacagctggcaacgag
gagggcaactttgtcattgacagccagaaagttttagggttgatccggctgcgctccacc
ccccctcccaagctccagggcctggagtatgtcctcaacgtgacggctacggacgacaac
gcctccggggggccacacccactctctgcaactgcccgggtcatcgtgggtgttgacgac
gtcaataacaacaaacccatctttgagaagtgtcagaagtacagggagcaggcgtctgtg
ttggagaaccagcccacagggaccttcgtgctgcaggtgcacgcggtggatgcagacgag
ggggccaatgggaaggtcaagtatggcctgatgcacagagacagagccatgcctgccttc
agagtccatcctgacacaggtgtgatcgtgacggcacggcggttcgaccgggaacgtcag
agagagtactccatcacagtgacggctacagactgggctgacgagcctctcatagggatc
tgtcaactcaacgtcctcatccaggaccacaatgacaacagccccaagtttgagaacctg
cgctacgagtactttctgagagaggacaccatgatcggcaccagtttcctgcgtgtggct
gcgcacgatgatgactttggcaccaacgccgtcgtcacctactccatgtcccaggagcag
cctgagtacctgagggtcaaccctgttaccggctgggtgtacgtcaaccagcccatatca
cagaggtcctacatcacacgggaagtagttgccacggatggggggaatcgcagcacatct
gtggagctgtctgtcaccattaccaatgtgaagaaccagcccccgcagtgggaaaaggac
agctacagcgtggtcatcccagagaacacagccagggacacttccatcgtgacgatcaaa
gcaacctcgttgctaggcgaccccagggtgacttacaacctggaggagggcgtggtcccg
gagactaacatgcctgtgcggttctacctgtcgcccaaccgcgaggacggctctgcctcc
atcctggtgtcggagccgctggactatgagaccacacccagtttctccctgagggtgcgg
gctcagaacgtggcggcagtaccactggctgcattcaccaccatctatgtcaacgtcaca
gacgtgaacgacaatgttcccttcttcacctcctccatctatgaggcatcagtgactgag
ggagccacggtggggaccatggtcctccaggtgtctgctcacgataaggacctgggtctc
aacggacagatcacctactccctcctgagtgacagtagtggggaccaccgtctgtttcgt
gtggatccagagctaggctccatctatacaaaggcggtgtttgaccgcgaggcacaggga
tcctacctactggaggtgcagtctgaagacggcatggagtcagcacggcccgggaggaac
aaacagcccaactttgacacagcatatgtgcgggttttcatcagcgacgtgaacgataac
aaacccgtctttgctcagcgtctctatgaagtcggcattgacgaggatgcagatgtcggc
ctggctgttgtcaccgtcggagctaatgacgaagatgaaggtgccaacgccaagctgcgt
taccagatcacatcgggcaacaccggaggggtgtttgacatggagcctgaagtgggaacc
atcttcatcgcccagcctctggactacgagctgcagaagaggtacaagctgctggtgctg
gcatcggatgggaagtgggaggactacgccgctgtggtggtcaatgtggtcaacaagaac
gacgaggctccagtcttctctatgaatgagtactacggctcagtgaccgaggagctagat
ggctcgccggtctttgtgcttcaggttacagccatagacccagacaaggatgcagaccaa
gtcgccgtgcgctactctcttcatggtcagggatcggagtctaagtttgtgatcgacgag
atcacagggaaaatgtacgcccagaagacactggaccgcgaggagcgggcagtgtggcgc
tttgtggtcctggccacagacgaggaaggggaggggctcaccggcttcactgatgtcatc
atcaacgtgtgggacatcaatgacaatgcgccttccttcgtctgcgtgcccgacggctgt
cacggcaacgtgggcgagaactcgcccccaggtaccttcgtcatggagatgacggcgacg
gaccttgatgacacggcggtgggtcagaacgccatcctctcctaccgtatcatcgagaac
gtgcatgacgcaggagccgccaacttcttcaccgttgacgccagtacaggcaccatctca
gttgcaaccggtgggttggacagggaggtggcagagcggcaccagctggtggttgaagcc
aaggatggagagggtatgatgggcacggctaccgccactatcatcatcacggacctgaat
gaccataccccccggttcaaagacaagtggtgcagtgctcgtgtgtctgagagcagccct
ccagactcaaccgtgctgaagctggatgctgtggacccagactcggggcctcacggcctg
ctgggcttcagtgtggtggcaggggaccagggggagaggttctacatggtgagccacaaa
gcagagcagtctggaactctgaggctgagaaagaggctggattacgagaggcccggcgag
caacaattcaacctcaccattcgtgtggaggactccgacttctccagcctcatccactgt
atcatccaggtgttggacgagaatgaccacgtcccagtgttcgcccccacctcctacccc
ctcgcccctctgccagaggatattgcagtgggaaccagtatcacccaggtgacggccagc
gactcagactctgacctgaatggggaaataatctatagcatctccccagagtcagacccg
tacggacatttcacagtggacggaaacggcatcatgaccgtgacatgcccgttggacaga
gaaatcgtggcagagtaccagctggttgtcctagcgacagaccggggtagtccagccttg
acgggtagcaccacgatccagctgagcttgctggatgtaaatgacaatgggccagagctg
gaggtgaactataaccctgtcctctgggagaacagccctgctccacaggtggtgtggctc
aaccagacctccaccctgctccacgttatcgacagggactcccttgagaacgggcctccc
ttctccctctctctccctcgcctctacgcccctgactttcacctgcaagaccatggcgat
ggcacggcaacgctcacggcactgcaccgcttcgaccgcgagcggcagagggagttcttc
ctgcccgtggtcatgacggacagtggtcgtccgccaatgacggtcaccaacacactcacc
gtcactgtgggcgaccaaaacgacaatgcccaccaggagggagagaaggagatttacgtc
cacagccggaggggaaagatgcagactacttcactgggcaaggtctatgcccctgatcct
gatgattgggacaacaagacctacaccttagatgcaagaggaatgaagtatttcacctta
gacaagagtacaggtcacctggccatcagacagaataccctagcgggcagctactatctc
agagtgggcgtgtcggatggggtgtggccggacgtggtctcgggggtcacagttcacgtg
cgggagctggaggaccaggcaatccatttgtcagcctccctgcgtctcacaggcatcact
gcccgggattttattgagtcccaggtggacaagacgagtcgacaggatatgttcaggggc
ttcctgtctgaacacctggccgtcagattaggcgccatcaacgtattcagcctgacagac
gtaggactgaagacgctggacgtgcgcttctctgtgcacagcgacagctaccttcgccca
gagaaactacatggattccttgcggtgcataagaagaagctgcagtctctgctgcgggtg
aatgtgtcccaggtacaggtggatgagtgtgtgtacacagactgcagggcgggtgggggt
tgctccacatacctcagcgtcagtgacacgcccaccctggtggatgctggcaacatggcc
ctggtgtctgtgacagtgacttcctcagccgtgtgtggctgcaccgccagggaccgtgtc
caccaggcctgttcctcctacgccacaaacccctgcttcaatggaggcacctgcatggac
accctcagcgggtacagatgccagtgcccaccccagtacgagggtcctgagtgccagcag
acaaggcgaagtttccttggcaacggctatgcctggtttcctcccataaggccgtgcttt
gatagccatctctccctggagttcatcacaggggctgaggatgggctgctgctctacagt
gggcccctggccaccctgcttcccagagacccagaggactacatggccatagagctgatt
ggtggaacacctagcctgaaaatcaaccatgggtctggaaccctggtcctgcagttgccg
ggaaatgtggttgtgtccgacagacgctggcaccgtctagatgttaggagcaacagtaaa
gaagtgcgtttcaccctggatcgctgctccagtgccattgtcatggagacagagggcgtg
gacagctgggccatgaccgaggaccgctcttcttgtgaagtcagaggagtcacgcccaat
agggacaggtacctgaatgggagtcaggtgttgcagctgggtggtgtcaacgaaaacatg
tcctatgagtatccccagctgcagcacaagcacttcactggatgtctgcgcaacctggtt
gtggatagtatgctctatgaccttggttatccctcagagtcctccagcagtgccccaggc
tgctctctgactgatgggaactgtgtaaacatgggtgtaccagcctgtggcgccaggggg
cgctgtaacgggcagtgggactccttccgctgccagtgtgggcccggttacacagggatc
cactgtgaagacgaagtcccagagttctccttcgatgggaggaggagccatgtccagtac
caggtgggctggtctctcccggcccgtcacaccagcgtgcagctccaggtgcgaacccac
gtccccagcggtgtcctcctcagcctcttctcccaggagcagaatgaatacttgcgtctg
gaggtgtttcaggggctactggctgtcttttacaacctgggtgacagactctacaacctc
accctgcccttccaacgccttgacaacggagaatggcatgaggtggagctggatcgacat
ggcaaagagttcacccttcgattggatggtggcggcgggaggcaagaggtcacagccgct
cctgggcagagtcaggagatagtcatcgatcaaacagtggtgatgctgggaaactctttc
ccttcaggaaacaaccacagcttcctagggtgtctgcgagacctgaggctgaacgggagg
cccatgcccatggcaaagcagccctccgtggggtccaagggcctccaggtggtcacatcc
cagggggtctccccaggttgcccctcagacgcctgcaggaaacaccagtgctatcccccc
ttcatatgtgtggacctctggaggaaacacgagtgcaggtgcccccctggtcacatgacg
aaggagaatgactcgagcaaagtgtgtgtctacacgctgtgcgtcagcaggccctgtcgc
cacggcacctgtgtggcccactcgcctgccaagtactcgtgtcactgctccgaaggctac
cgtgggcgccactgtgaggtctctctgacgctctaccacaacaacgacaacaacactttg
agcctcagctctgcgtttgccatcagtatctgtgtcctggccttcctagtgctgatgctg
ggcctgtccctctactcctgctggaggagacacaagggcctgaaggagggcatctaccac
gtatccgcacaccacggagaatgggaggacatccgagagaacgtgctcaactatgacgag
gagggtggtggggagcaggaccagaatgccttcaacatggtggagttacagaggtctctg
cggcccagtccagcccagtcactttggtacagctacccacaatgcatcataccctcatcc
taccctcagacgaccaagcccccagacacgaagaatgggaccaaaccaaaaggaccaaac
ggacccaaaaacggcagcacagcaatcgccctgcgcctggcccaccctccgtccgggtca
gccaccctcacctcccccattgcaatgcggcgttcccacaagtccctgtccttctccagt
caggacctggcccgctacctgtgtgaggtcatcagggacacagaccactccacgggggac
aaccccggctacatgacctcactgcgtcccctgtccaataaggcgcagcgtggcaggctg
gccgtgcgctcgctcagctctctcagtgatgaaggtcaggggtcggaggttagggttcat
gggggtcaagagagcctgaaaggtcagagatcccagagcccacggctggacaggctcaaa
gccctgcgagctgttgccagtgaactcagagtggacggtgctgtggactctgctgccgcc
aagagcacagagggacagaaggacaaagtgaaggacagagagtgcagggcgcagcccaac
tgtgagaagagcggatga
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integrated database retrieval system