KEGG   Oncorhynchus mykiss (rainbow trout): 110532316
Entry
110532316         CDS       T07259                                 
Symbol
exosc10
Name
(RefSeq) exosome component 10
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110532316 (exosc10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110532316 (exosc10)
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     110532316 (exosc10)
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC
Other DBs
NCBI-GeneID: 110532316
NCBI-ProteinID: XP_021471773
Ensembl: ENSOMYG00000018962
LinkDB
Position
9:51044415..51056932
AA seq 934 aa
MVRSVAALYSSPVSGAIAHLMLVLPIKPNGEEEKPSAVVSCHSHVQKLEMDSSNSDKQNN
NQSVNEDPAGVDNEFCPGFKDVDAFVKYGLGTVVAATKASASLPQVGDEYDLYRSFPGFQ
EFCETQGDGLLHCMSQIMHHHGCRAHMRDRNKLTGLEERFDLVVDSNDVILEKVGILLDD
AAGVNRSQQPVMPAGFQPPKIVVSSWNRKGGDSGSGRSSETFRLLQAKNVTRPQLKFREK
VDNSNTPFTPKIFVKPNAIKPLPSYFTNKHIRKERPEDLDVPAALADFIHQQRTQEHVED
MFAHPYQYELDHLALPENLLSKPEPQMYKPLAETKCSFIDTLEDLVAVNEKLAKTSEFAV
DLEHHSYRSFLGITCLMQISTRDEDFIIDTLELRSELYILNEAFTDPAIVKVFHGADSDI
EWLQKDLGLYIVNMFDTHQASRTLNLGRHSLDHLLKLFCNVDSDKRYQLADWRIRPLPDE
MFQYARADTHYLLYVYDRLRVDLWEVGNGQPALLQMVWHKSKDISLKKYMKPLFTEDSYM
DLLRKQKKAFNTQQLTAFRLLYGWRDKLARQEDESTGYVLPNHMMIKISDILPKEPQGII
ACCNPVPPLVRQQVNELHLLVQQAREMPLLKAEIVADKKKTLTPIKKPEIPLFGPHDTSR
VSESDIPSFTPDELSTKKGALFSEEEQGEEVDMHKMMGLVVSAKITLFEEDTVKDPGHLT
VAQQKACRVVESFQNPFRMYLPSNDIHISKNAKFDPSTKIYEISNRWKLQSVEQQQKEVE
AKKKAKEEAKAVAEERKKAKQSYQESLQNVATVRQQASESIKPGGKKRERVASETGESTP
KPNKKLMKAAVKKNEDSTTPLVFKPYDYSQSDFKVFAGAKGNDGKQFDPDRQGHEPRKKK
NAKAQKSNACAGNRSMSFFGGKSERGFHRNWPKR
NT seq 2805 nt   +upstreamnt  +downstreamnt
atggtgcgttctgtcgctgctctatactccagtccggttagtggcgctattgctcatcta
atgttagtgttacccataaaacccaacggtgaagaagaaaaaccaagcgcggttgtttcc
tgccactcgcatgtacagaaattagagatggattcttcaaacagtgacaaacaaaataat
aatcaatctgttaacgaagacccagctggtgtggacaacgaattttgtcccggtttcaag
gatgtggatgcatttgtgaagtatggactgggcactgtcgtagcagctactaaggcatct
gccagtctaccgcaagtaggggatgaatatgacttatatcgcagcttcccgggatttcaa
gaattctgtgaaactcaaggagatggactgttgcattgtatgagtcagataatgcaccac
catggctgcagagctcacatgagagaccgcaacaaactgacggggttggaggaaagattt
gacttggtggttgattccaatgatgtcattcttgagaaagtgggtattctgcttgatgat
gctgccggagtcaacagaagccagcaacctgtcatgcccgcaggttttcagccccctaag
atcgtcgtatccagttggaatcgtaaggggggtgactctggttctggacgtagttcagag
acattccgactcctccaagccaaaaacgtcaccagacctcagttgaaattccgtgaaaaa
gttgacaatagcaacacaccgtttactccaaagatcttcgtcaagcccaatgcaataaaa
ccacttccttcatattttaccaacaaacacattcgcaaagagagaccagaggatttggat
gtccctgccgccctggctgatttcattcaccagcagagaactcaggagcatgtagaagac
atgttcgctcacccataccaatacgaactggatcaccttgcgttacccgagaatcttctg
tccaagcctgaaccccagatgtacaaaccacttgctgagacaaagtgctcattcattgac
actctggaggatctggtggcagtaaatgagaaactggccaagacgtcagagtttgcagta
gatctggagcaccactcctacagaagttttttgggcatcacctgcctgatgcagatttca
acacgggatgaagacttcattatagacaccttggagctgcgtagtgagctgtacatactc
aatgaggctttcacagatcccgccatcgtcaaggttttccatggtgcagactctgatatt
gagtggctgcaaaaggatttgggcctttacattgtcaacatgtttgacactcaccaggcg
tcacgtacccttaacctgggcaggcactcgcttgaccacttgcttaagctgttctgcaac
gtggactctgacaaacgctaccaactggcagactggagaatacggcctttgccagatgag
atgtttcagtatgcccgggcagatacccactacctcctctatgtctacgatcggctgagg
gtggacctgtgggaagtgggcaatgggcagcctgccctgctgcagatggtctggcacaaa
agcaaagacatctcattgaagaaatacatgaagccgctcttcaccgaggactcctacatg
gacctgctgaggaagcagaagaaggcgttcaacacgcagcagctaactgccttccgactg
ctgtacggctggagggacaagctggccagacaggaggatgagagcactggatatgtcctg
cccaatcatatgatgattaagatctctgacatcctgcccaaagagcctcaaggcatcatc
gcttgctgtaaccctgtcccaccattggtgcggcagcaggtcaacgagctccacctattg
gtgcagcaggcccgggagatgccccttctcaaggctgaaattgtggctgacaagaagaaa
acactcacgcccataaaaaagccagaaattcctctttttggtcctcatgatacatccaga
gtctctgaaagtgatatccccagctttaccccagatgaactctcaaccaaaaagggggca
ctcttttctgaagaggagcagggagaggaggttgacatgcataaaatgatgggtctagta
gtttcagcgaaaatcacattgtttgaggaggacaccgtcaaagaccctggtcacctcaca
gtggctcaacagaaagcatgcagggttgtcgagtcatttcagaaccctttccgaatgtat
ctaccgtcaaacgacatccatatctccaaaaatgctaagttcgacccctctacgaaaata
tatgagatcagtaatagatggaagctgcagagtgtggaacagcagcagaaggaggtagag
gccaaaaagaaagcgaaggaagaggcaaaggcagtagcagaggaaaggaagaaggccaag
cagagctaccaggaatcacttcaaaatgttgcgactgtgcgccagcaagcttcagaatct
ataaaaccaggaggaaagaaaagggagagggttgccagtgagacaggagagtcgacccca
aaacctaacaagaaactaatgaaagctgctgtgaagaaaaacgaggactctacaacacct
ctagttttcaaaccgtatgactacagccagtcagatttcaaagtctttgctggggccaaa
ggaaatgatggtaaacagtttgatccagacagacaaggtcatgaacccaggaaaaagaaa
aatgcaaaagcacaaaaatcgaatgcctgtgctggaaaccgaagtatgtccttttttggt
ggaaaatccgaaagaggattccatcgtaactggcctaaaagatag

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