KEGG   Oncorhynchus mykiss (rainbow trout): 110532350
Entry
110532350         CDS       T07259                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110532350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omy03041]
    110532350
   03400 DNA repair and recombination proteins [BR:omy03400]
    110532350
Spliceosome [BR:omy03041]
 Complex B
  Other components
   Prp19 complex
    110532350
 Complex C
   Prp19-CDC5 complex
    110532350
DNA repair and recombination proteins [BR:omy03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    110532350
SSDB
Motif
Pfam: BCAS2 THOC7 RRP36
Other DBs
NCBI-GeneID: 110532350
NCBI-ProteinID: XP_021471848
UniProt: A0A060W1L3
LinkDB
Position
9:complement(52365761..52371772)
AA seq 225 aa
MAGTSSVAGEVFVDALPYFDQGYDAAGVREAAAALVEEETRRYRPTKNYLSYMPTPDFTT
FETEIMRNEFERLAARQPLELLSMKRYELPAPSSGQKNDITAWQESVNNSMAQLEHQAVR
IENLELMAHYGTNAWKVYNDNLAFMIELAQKELQKCRKQIQDLNWQRKNDQLAGGAKLRE
LESNWVSLVSKNYEIERAIVQLENEVGQLKQQHGDENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggctggaacgtcatcagtagctggtgaagtatttgtcgatgccctaccgtattttgac
cagggttatgatgcagcgggcgttagagaggcggctgcagccttggtagaggaggagact
cgccgatacagacccaccaagaactacctcagttatatgccaacacctgatttcactaca
tttgaaactgaaatcatgaggaacgagtttgagagactagcagcccggcagcccctggaa
cttctcagcatgaagagatatgagcttccagctccatcatcagggcagaagaatgacatc
actgcatggcaggagagtgtgaacaactccatggctcagctggagcatcaagcagtgcgc
attgagaacctggaacttatggcacactatggtaccaatgcatggaaggtctacaatgat
aacctggcctttatgattgaattggctcaaaaagaactacagaaatgtagaaagcagatt
caggacttgaactggcaacggaagaatgatcagcttgcaggcggggccaagctgagagag
ctggagtcaaattgggtgtccctcgtaagtaagaactatgagattgaacgtgccatcgtc
cagttggagaatgaagttggacagctcaaacagcagcatggtgacgagaacaaggaaaac
attcgacaggacttctag

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