Oncorhynchus mykiss (rainbow trout): 110532450
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Entry
110532450 CDS
T07259
Symbol
nfascb
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110532450 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110532450 (nfascb)
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
L1 family
110532450 (nfascb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_5
Ig_DSCAM-DSCAML_C
Ig_6
C2-set_2
Ig_4
V-set_CD47
DUF3792
Motif
Other DBs
NCBI-GeneID:
110532450
NCBI-ProteinID:
XP_021472040
Ensembl:
ENSOMYG00000043002
UniProt:
A0A8C7UPH7
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All DBs
Position
9:57120186..57136910
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AA seq
1187 aa
AA seq
DB search
MGMLARSTLLLLLWQGLSAIDVPLEIRQPPTIIKQSLKDHVVDPRDNMVVECEAKGTPHP
IFSWRRNGKYFNVARDPQASMRRRSGTLDIYAWADPEAYEGEYQCVATNEYGTAYSNKIN
LRISRAPLWPREVLEPVTVSVGLPLVLDCSPPPGPPKPETYWMSKCSSGRPFNWPHQPHP
PVMLPIKQDRRVSMGVNGDLYFSNVYVNDSATDYCCNARFPYKNIIQQKMPITVRVLTTR
MVSEAAPTFLSPAGRSSSQTVLQGEELLLECIAAGVPTPVITWTKDGQELDTTNMKVKNY
NKLLQIPKAAFEDSGEYTCSATNKIGYLEHTITVRIKAAPFWLEKPSNLVLAPEENARLV
CRSDGIPRPSIRWFINGDTMEDATPVPNREVSGDTITFRSVTVANTGVYQCNASNQYGYL
FANAYINVLHAKPRILRPRTDLVKVIEGRRAWLDCRYFGSPVPDLRWSKYGLGNLEGNRF
KVHSNGTLQIKGTRMDDQGSYVCVVSNVAGRDENEVKLEVKESTKILKRPDNMRVLRGTD
VRLECKAQHDPTVAVTTTWLKNKQFLIIGWRLSLDESTLVITNVNRGDEGNYTCIIKTEM
DKNTASARLVVMDRPDPPTNLQLSDPFERSVRLTWTPGDSNHSPIKENLVQYDDDDWLPF
KWRNLSTYPGNLNSVILQLSPFIIYEFRVIAINDIGMSKPSRSSANFQTGGAPPDAIPKN
IQGVGTWRNNMMISWEALNNREWNGPHLKYLVWWKRRDSREEWKNATTWWCKYYIYDTDT
FTPYEIKVQAVNDFGMGPESPVIIGYSGEDRPTAAPLNLRVSRIEATKVTVHWDPVARSS
IMGELKEYKVYFWRDSSQLRWLSVSRAMKSKAFPASGPRLSGVLPGLIPYSNYKMYIVVA
NNRYEGHPSNTIEFSTPEGTPSAPRSFRIQQRHLDMIWVDWDTPAEPNGIVTGYILKYQT
VNATQGEELHVEGFPPNTTSFAVRRYDRYTRYRFTIAAQTRIGVGEWYTEESPHYTTEAY
AREQVDLSTQGWVIGVMCAVALFVLILLVVCFIKRSRGGKYPVRDKKEVTLEPVDDKDQE
GSFDYRSLERISRVTTIPYSARREEETKVGRGQTTVDTMMKRTDSDDSLVDYGDGQEIEF
NEDGSFIGQYTGHKERDDRDTEFSESRSQEAHSPMANSPMSPIYSFA
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggggatgctggccagatccactctattactactgttatggcaaggactgtctgccatt
gacgtcccactggaaatcagacagccccccaccattataaaacagtcgttgaaggatcat
gtcgtggaccccagagacaacatggtcgttgagtgtgaagccaaaggcaccccccaccca
attttctcatggaggcgtaatgggaagtatttcaatgtggcacgggaccctcaggcctcg
atgaggagacgttcggggacgctggacatctatgcctgggctgacccggaggcttatgag
ggggagtaccagtgtgttgccaccaatgagtatggcactgcatactcaaacaagatcaac
ctacgcatctctagggcccctctgtggcccagagaggttttggaaccggtaacggtgagt
gttggtcttcctctggtcctggactgcagccctcctccaggccctcccaaacctgagacc
tattggatgagcaagtgttcatcagggagacctttcaactggcctcaccagccccacccc
ccagtcatgctgcctatcaaacaagaccgtagagtgtctatgggggtgaatggagatctc
tacttctctaatgtctacgtcaatgactctgccactgactactgttgcaacgctcgcttc
ccctacaaaaacataattcaacagaagatgcctattaccgttagagtccttacaacccgc
atggtgtcagaggccgctcccaccttcctgtctccagccgggaggtccagctcccagact
gtcctgcagggggaggagctgctcctcgagtgcatcgctgctggagttccaacccctgtc
atcacatggaccaaagatggacaggaactggacacgaccaacatgaaggtgaagaactac
aacaagttactgcagatccccaaggccgcttttgaggactctggtgaatacacgtgcagt
gccacaaacaagattggatacttggaacacaccatcactgtccggatcaaagctgctccg
ttctggttggaaaagcccagtaacctggtgctggccccagaggagaatgcacgcttagtg
tgccgctctgacggcatcccccggcccagtatccgttggttcatcaatggagatacaatg
gaggatgctactccagtcccaaacagggaggtgtccggagacacaattaccttccgttct
gtgactgtggcgaacactggtgtataccagtgcaatgcctctaaccagtatggctacctg
tttgccaatgcttacatcaacgtactgcatgcaaagccacgtatccttaggcctaggact
gacctggtgaaggtcattgagggcagacgcgcctggctagactgccgctattttggctcg
cccgtgcctgatctgcgctggtctaagtatggactgggcaacctggaggggaatcgcttt
aaagtacacagcaacgggacactacagatcaaaggcacccgtatggatgaccaggggtca
tatgtgtgtgttgtcagcaacgtagcaggacgagatgaaaacgaggtcaaactagaagtc
aaagagtccaccaaaattctcaaacgcccagataatatgagagtcctccgggggactgat
gtccggttggagtgtaaggcccaacatgaccccacggtcgccgtcaccaccacctggctg
aagaacaaacagttcctcatcataggctggaggctgtcgctggatgaatcaactctggtc
atcacaaacgtcaatagaggagacgagggcaattacacctgcatcatcaagactgagatg
gacaagaacactgcctccgcccgcctggtggtgatggatcgtccagacccccctacaaac
ttgcagttgtcggacccctttgagcgcagcgtcaggcttacctggacccctggagatagc
aatcacagtcctatcaaagaaaacctggtgcagtatgatgatgacgactggttacctttc
aagtggagaaacctttccacgtaccctggaaacctgaactctgtcattctgcaactgtca
ccattcattatctatgagtttagggtcattgctatcaatgacattggtatgagtaaaccc
agtcgctcgtcagccaacttccagactggtggagcacctccagacgccatccctaaaaac
atccagggagtgggaacatggagaaacaacatgatgatcagctgggaggcattaaacaac
agagagtggaacggtccccacctaaagtacttggtgtggtggaaacggagggattccagg
gaggagtggaagaacgctaccacttggtggtgtaaatactacatctacgacacagacacc
ttcacaccatacgagataaaggtccaggctgtcaatgactttgggatgggcccagagtcc
cctgtcatcataggctactctggagaagaccgtcccactgctgcccccctcaacctgcgt
gtgtccaggatagaggccactaaggtcaccgtgcactgggaccccgtggctcgcagcagc
atcatgggagaattgaaggaatacaaggtctacttctggcgagacagtagccagctgagg
tggctgagtgtgagcagggccatgaagtctaaagcctttccagccagcgggccgcgtctc
tctggtgtcctgccgggactcatcccttacagcaactacaagatgtacatagtggtggcc
aacaaccgatacgagggacatcccagtaacaccatagagttctccactccagagggaaca
ccctctgctccaagatccttcagaatccagcagagacatttggacatgatctgggtggac
tgggacactcctgcagagcccaatggcatcgtcaccggatacatactcaaatatcagaca
gtgaacgcaactcagggggaagaattgcacgttgagggatttcccccaaacaccaccagt
tttgctgttcgcagatatgatcgctacacccgctatagattcaccatagcagcacagaca
agaatcggagtaggagagtggtacacagaggaatcaccccattatacaactgaagcttat
gctcgggagcaggtggacctctccactcagggctgggtaattggtgtgatgtgtgctgtg
gctctattcgtgctcatcctgctggtcgtctgctttatcaaaaggagccgagggggcaaa
tacccagtacgggacaagaaagaagtgacattggagccagtggatgacaaagatcaggag
ggatcatttgactatcggtctctggaaaggataagtcgtgtcaccaccattccctactct
gcccgacgggaggaagagactaaagttggcaggggccagacgacagtagacaccatgatg
aaacggacagatagtgacgacagtctggtggactatggggatggacaggagattgagttc
aacgaggacggctccttcattggccagtacactggacacaaggagagggatgacagagac
acagagttcagtgagagcaggagccaggaagcccactccccgatggccaactcccccatg
agccccatctattcatttgcataa
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