Oncorhynchus mykiss (rainbow trout): 110532470
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Entry
110532470 CDS
T07259
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omy03400
]
110532470 (apex2)
Enzymes [BR:
omy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
110532470 (apex2)
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
110532470 (apex2)
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
110532470
NCBI-ProteinID:
XP_021472087
Ensembl:
ENSOMYG00000046669
UniProt:
A0A8C7UUX2
LinkDB
All DBs
Position
9:58286445..58290128
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AA seq
594 aa
AA seq
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MKIVSWNINGIRTFKGGIKNALESLDADIVCVQETKVTRDLLDERTAIVEGYNSYFSFSR
GRSGYSGVATYCKDSATPFAAEEGLTGLLTTNPKGTIGCYGDSSEFSSEELQLLDNEGRA
VLTQHRVMCEDTPETVTVINVYCPRADPEKPEREHFKLQFYKLLQCRAEAILEAGSRVII
LGDVNTSHRPIDHCDPDYIDDFEDHPGRKWLNGLLVDDSEGKEYEKNNEESENTSSKPLR
SGKFVDTFRHFHPTRSKAFTCWNTMTGARQTNYGTRIDYIFADHPLVKMGFVAADIMPEV
EGSDHCPVWGKLCCPLLSSSKLPPLCTRNLPEFAGRQQKLSRFLIKMDQQQPVREACRDP
LPGSQETGETRENLNPLGSAGTTSTGKKRKLAVESGVPKSKKIMTLKAATPKPQGNLLAF
FKPKSVPVAPTREDPVSQCERGEERNEVTPSQPHTFKGGHSAGQDVPSIPGTPCTEYPQG
VCMGDKVHVPGSNIQDASVNSQNQEKDAALASEATVDPPCPRKGASLGGFWKTVLRGPPP
PPPCKAHGEPCVLRTVKKAGPNMGKQFFVCNRPQGHASNPEARCNYFSWVDKGK
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtcagttggaacattaatggcataagaactttcaagggtggaattaaaaat
gcgcttgagtcgctggatgctgacatcgtatgtgtccaagagacaaaagtaacaagagac
ctgctggatgagaggactgctattgttgaaggttataactcatatttcagctttagtcgt
ggacgcagtggctactcaggagttgctacttactgcaaagacagtgccaccccatttgct
gcagaagagggcttgaccggtctgctgaccaccaacccaaaggggaccattggatgctat
ggtgactcgagtgagttctccagtgaggagctgcagctcctggacaacgagggaagggct
gttctcacacagcacagagtcatgtgtgaagacacacctgaaacagttacggttatcaat
gtatactgcccacgagctgacccagaaaagcctgaacgtgaacatttcaaactgcagttc
tacaagctgcttcaatgtcgggctgaagcaattttagaagctgggagccgtgtaatcatc
ttgggagatgtgaatacatcccaccggcccatagatcactgtgacccagattacatagat
gattttgaggatcaccccgggaggaaatggttaaatggtttactggttgatgacagtgaa
ggaaaggagtatgaaaaaaacaatgaggagtctgagaatacctcatcaaaacccctccgc
agcggcaagtttgtggacaccttccgccattttcacccaacacgctccaaggccttcacc
tgttggaacactatgactggagccaggcagaccaactatggcacacgtatcgactacatc
ttcgcagaccatcccttggttaaaatggggtttgtggcagcagacatcatgccagaggtg
gaggggtctgatcactgccctgtctgggggaaactgtgctgccccctcctgtccagctcc
aagctgcctcccctctgtacccgcaacctaccagagttcgctggcaggcagcagaaactc
tcacgcttcctcatcaagatggaccaacaacaacctgtcagagaggcctgcagggaccca
ctaccaggatctcaggagactggggagacccgagagaacctgaatccactgggatcagca
gggaccacctccactggaaagaaacggaagttggcagtggaatctggtgtcccaaagagc
aaaaagattatgacattgaaggctgctaccccaaagccccagggcaacctcctagccttt
ttcaagcccaaatccgtacctgtggccccaaccagggaagaccctgtgagtcagtgtgag
aggggagaagagagaaatgaagtgaccccatcacaaccacataccttcaagggaggacat
tctgcaggacaagatgttccatcaattccaggcacgccgtgcacagaatatccccagggt
gtctgtatgggagacaaagtccatgtaccgggcagcaacatacaggatgccagtgtcaat
agtcaaaaccaggagaaggatgcagccctggcttctgaggctactgtagaccccccatgt
cccaggaagggggcttcactgggcgggttctggaagacggtcctgcgtgggccaccccca
ccgcccccctgtaaggctcatggggaaccctgtgtactccgcacagtcaagaaggcaggt
ccaaacatgggcaagcagttctttgtgtgtaaccgccctcagggccatgcatccaatccc
gaggctcgctgtaactacttttcttgggtggataaaggaaaatag
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