Oncorhynchus mykiss (rainbow trout): 110532588
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Entry
110532588 CDS
T07259
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
omy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110532588
03015 mRNA surveillance pathway
110532588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110532588
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110532588
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110532588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110532588
NCBI-ProteinID:
XP_021472280
Ensembl:
ENSOMYG00000002953
LinkDB
All DBs
Position
9:62173452..62186259
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AA seq
508 aa
AA seq
DB search
MATNSWALAVDKQESTTDSFGSLVIRSPPRGGGDAAPRKAKGTTKQVENGTKVEEKEDKA
AQSLLNKMIHTSLVNTTNQVEVLQRDPKSPLYSVKTFEELRLKDELLRGVYDMGFNRPSK
IQENALPMMLAEPVYYPSGSRPQNLIAQSQSGTGKTAAFALAMLSHVDPANKWTQCLCIA
PTYELALQTGKVIEQMGKFYPEVKLAYAIRGNKLDRGTKLQEQIVIGTPGTVLDWCSKLK
IIDPKKISVFVLDEADVMIATQGHQDQSIRIQRMLPNECQMLLFSATFEDSVWKFAERVV
PDPNIIKLKREEETLDTIKQYYVLCNDKDEKFTALCNIYGAITIAQAMIFCHTRRTAGWL
SAELTKEGHVVALLSGEMTVEQRAAIIERFREGKEKVLVTTNVCSRGIDVEQVSVVINFD
LPIDKDGNADNETYLHRIGRTGRFGKRGLAVNMIDSKHSMNILNQIEEHFSTFVSIPINY
NIVHIDLYNSVLISNLTFRLVFSPQIRR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggctactaactcctgggctctggctgtcgataaacaggaatctacgactgactctttc
ggctccttggtgataagatccccacctcgaggtggaggtgatgctgcacctagaaaggca
aaaggtaccacaaaacaagtggagaatggcaccaaagtggaagaaaaagaggacaaagcg
gcccagtcgttgttgaataagatgatccacaccagccttgtgaacactaccaatcaagta
gaggttcttcagagggatccaaaatctcctctttactcggtcaagacatttgaagagctg
agactgaaagatgagctgctaagaggagtgtatgacatgggtttcaacagaccctctaag
atccaggagaatgccctgcccatgatgctggcagagcccgtgtattatccctctggttcc
agacctcagaacctgattgcccaatcacagtccggcacaggtaaaacagctgcctttgcg
ctggccatgctcagccatgttgacccagctaacaaatggactcagtgtctttgcattgcc
ccaacgtacgagctagctttgcagactggtaaagtcattgaacagatggggaaattctat
cctgaggtcaaattggcatatgccattcgtggcaataaattggacagagggacgaagctt
caggagcaaattgtcatcgggacacctggcacggtcctagactggtgctccaaactgaag
atcatcgaccccaagaagatcagcgtcttcgtcctggacgaggctgacgtcatgattgcc
acacaaggtcaccaggaccagagcatccggatccaaagaatgttgccaaatgaatgtcag
atgctgctgttttcggccacgtttgaggactcagtctggaagtttgcagagagggttgtg
ccagaccccaacatcatcaagttgaaacgtgaagaggagactctggacaccatcaagcag
tattacgtgctctgcaatgataaggacgagaagttcacagccctctgtaatatctacgga
gccatcaccattgcccaggctatgatcttctgtcacacccgaaggacagctggctggctg
tctgctgagctgaccaaagagggccatgtggtggcactgctgagtggggagatgactgtt
gagcagagagcggccatcattgaacgcttcagggagggcaaagagaaagtcctagtgacc
accaacgtatgctccagaggcattgatgttgagcaagtttctgtggtgatcaactttgac
ctgcccatagacaaagacggaaacgctgacaacgagacataccttcaccggattggccga
acaggacgtttcggcaagagggggcttgccgtcaatatgattgacagcaaacacagcatg
aacattctcaaccaaatcgaggagcatttcagtacatttgtctctataccaattaattac
aacattgtacatattgatctatataatagtgttctcattagtaacctaacctttcgtctc
gttttttccccacagataagaagataa
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