KEGG   Oncorhynchus mykiss (rainbow trout): 110532646
Entry
110532646         CDS       T07259                                 
Name
(RefSeq) cyclin-T1 isoform X1
  KO
K15188  cyclin T
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110532646
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:omy03021]
    110532646
Transcription machinery [BR:omy03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     110532646
    Brd4/P-TEFb complex
     110532646
    7SK RNP complex
     110532646
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N
Other DBs
NCBI-GeneID: 110532646
NCBI-ProteinID: XP_021472393
LinkDB
Position
9:64099643..64110913
AA seq 692 aa
MAASFPSPSGTNNKWYFTREQIENSPSRRVGLDPDKELSYRQQAANLLQDMGQRLNVSQL
TINTAIVYMHRFYMIQSFTRFHRNVIAPATLFLAAKVEEQPRKLEHVIKVTHACLNPQDP
SPDVRSDAYLQQAQDLVILESIILQTLAFEITIDHPHTHVVKCTQLVRVVPASKDLAQTS
YFMATNSLHLTTFCLQYSPPIVACVCIHLACKWSNWEIPVSTDGKHWWEYVDNTVTLELL
DELTHDFLQILEKTPSRLKRIRNWKAAGQTVKGGKSKVPEDGDQTDCMMSMISMSSSETT
LASLSNPSSSSMAPILLELKSTLGSGSDQPNHVELHAPAKVSLSEYRAKHADVLAAQKRK
LENMEASVKREYASAAQALIGQHQRKEKYNRDQLQSSSHHSSLASSDLSSPSPIILKIPL
EKERGERSSLKMRLPLGTGGGGGHSGGGNRGAGGEQDIKVRIRVPEKVRSAGSGEEGGKS
REGKHRDRSHHHHHHHHHHSSSSLSGASVSSSSSHKHSASAAGAVGGSGSKKTPSDSSRM
SSSSASRKRTHSTESQGSHPSKVSKSSRNSAYQLPALLAASSAHSLGAQTAEILPSLGLP
SLHQGNFSHSKGDKTDTNGHNAGGGSQSNEYQDTFEMLNSLLSAQGVQPAQPPMFDYRSQ
YGEYRYSGGSRGGSRPPPLPAEPPPPLPPLPK
NT seq 2079 nt   +upstreamnt  +downstreamnt
atggcggcttcgttcccttctccttctggaacaaacaacaaatggtacttcacccgagaa
cagatcgagaatagcccatctcgtcgtgtgggacttgatccagacaaggaattatcctac
agacagcaagccgcgaaccttctacaggacatgggacagcgactcaatgtgtcccagcta
acaattaatactgctattgtgtatatgcaccgattctacatgatccagtccttcaccagg
ttccacagaaatgtcatagctccagcgacactgttcctggctgcaaaggttgaggaacag
ccccgcaagttggagcatgttatcaaggtgacccatgcatgcctcaaccctcaggaccct
tcaccagacgtccgcagtgatgcttacctgcaacaagcccaagacctggtcattcttgag
agcattatactccagaccctggcttttgaaatcaccattgaccacccacatactcatgtt
gtcaagtgcacccagctggtcagagttgtcccagcgagtaaggatttggcccagacctca
tacttcatggctaccaacagcctacacctgaccacattctgcctgcagtacagcccaccc
atagtggcctgtgtctgcatccacctggcttgcaagtggtccaactgggagatccctgtc
tccacagacggcaagcactggtgggagtatgtggacaatactgtcacccttgagctgctg
gatgaactcactcacgacttcctacagatcttggagaagacaccaagccgattaaaacgc
attcgcaactggaaagcggcaggtcagacagtgaagggagggaagtctaaggtgccagag
gacggggaccagacagattgtatgatgagcatgatctccatgtcgtcctctgagaccacg
ctggccagcctctccaacccttcctcttcatccatggctcccatactactggagctcaag
tcgaccctgggcagtggctccgaccagcccaaccacgtcgagctgcacgccccagccaag
gtgtcactgagtgagtaccgggccaagcacgctgatgtcctggctgctcagaagaggaag
ctggagaacatggaggccagcgtgaagagggagtatgcctcggcagcccaagctctgata
ggccaacatcagaggaaggagaagtacaaccgtgatcagctgcagtccagctcccaccat
tccagcttagcctcctctgacctcagcagcccctcgcccatcatcctcaagatccccctg
gaaaaggagaggggcgagcgcagctccctgaagatgcgcctccctctggggactggggga
ggaggggggcacagtggaggagggaacagaggagccggaggagaacaggacatcaaagtg
agaatccgggtgcctgagaaagtacgcagtgcaggctcgggagaggaggggggcaagagt
agggagggcaagcatcgagatcgctcccaccaccaccatcaccaccaccaccatcattca
tcgtcgtctttgagcggtgcttccgtctcttcgtcctcgtcacataaacactcagccagt
gctgctggagctgtaggaggaagtggtagcaaaaagacccccagtgactcatctagaatg
agctcctcctctgcttctcgaaagaggacacactccactgagtcccagggatcccacccc
tccaaagtctctaagtcctccaggaactcagcctaccaactacctgctctgttagctgcc
tccagtgcacactccctgggggcgcaaactgctgagatcctcccatccctgggtctcccc
tccctccaccagggaaacttctctcactccaagggggacaagactgacactaacggacac
aatgcaggcggggggagccagtcaaatgagtaccaggacacatttgagatgctgaactct
ttactgagtgctcagggggtccaacctgctcagcctcccatgtttgactaccggtctcag
tacggggagtacagatacagtggagggtcgagggggggctctcgaccgccacccctgcct
gctgaacctccacccccgctaccccctttacccaaatga

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