Oncorhynchus mykiss (rainbow trout): 110532852
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Entry
110532852 CDS
T07259
Symbol
abcd1
Name
(RefSeq) ATP-binding cassette sub-family D member 1
KO
K05675
ATP-binding cassette, subfamily D (ALD), member 1 [EC:
7.6.2.4
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy02010
ABC transporters
omy04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110532852 (abcd1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
110532852 (abcd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110532852 (abcd1)
Enzymes [BR:
omy01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
110532852 (abcd1)
Transporters [BR:
omy02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD1 subgroup
110532852 (abcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
Rad17
AAA_29
AAA_23
DUF4611
Dynamin-like_hel_bact
SMC_N
Adeno_IVa2
AAA_5
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
110532852
NCBI-ProteinID:
XP_036844995
LinkDB
All DBs
Position
9:76864306..76895649
Genome browser
AA seq
769 aa
AA seq
DB search
MLVMYEKLPEQLKKTSHARKAVILLVAAYGIKKLYPYLWAKLRKNVGGTPLPVPPLNSNG
VLLEGSEKQGKKKSSNSPAVNQEFLKRLSHLLRILFPQLFCKELGLLGFHSLALISRTFL
SIYVANLDGMIVKTIVKKDPQAFVWELTKWLLIAVPATFVNSAIRYLEGQLALAFRTRLV
THAYKLYFSNQTYYRVSNMDGRLANPDQSLTEDMVMFAASVAHLYSNLTKPCLDVVVTCY
TLLRTAESKGANTTWPSVIAGVVVAITAKVLRMFSPRFGKLVVEEARRKGELRYMHSRII
ANSEEIAFYGGHKVEMSQLQRSYRSLSSQINLILFKRLWYVMLEQFLMKYLWSASGLVMV
AVPIITATGYSRYDSEDVKQLAMNLKEEDLVSERAQAFSTARNLLNSAADAVERIMSSYK
EVTELAGYTARVHEMFTVFEDVRAGVFRRSAEGGDEQTGGGTQLVQHGMRVEGPIMIRGQ
VIDVEKGISCENLPIITPTGDVVVSSLNIKVEEGMHLLITGPNGCGKSSLFRILSGLWPV
YGGVLYKPPPQNMFYIPQRPYMSVGTLRDQLIYPDTETEMEERGFTDQQLEGILGTVNLV
YILEREGGWSAESDWKDVLSGGEKQRIGMARMFYHRPKYALLDECTSAVSIDVEGKIFQA
AKDAGIALLSITHRPSLWKYHTHLLQFDGEGGWRFERLDASTRVSLQDEKQKLESQLSGI
PKMQQRLSDLCRMLGEDATLSGTGGEEAGEEEEKEAGEDEKLEEKEKEE
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgttggtaatgtatgaaaagcttcccgagcaactcaagaaaacctcccatgccagaaaa
gcagttatccttctcgtcgctgcctatggaatcaagaaactctacccctacttatgggct
aaactcaggaagaatgtcgggggtacaccgctcccagttccccccctaaactctaacggg
gtgctactggaggggtcagagaaacaaggaaagaagaaaagtagtaactcgccggctgtg
aaccaggagtttctgaagaggctaagtcacctgcttcgtatcctgtttccccagctgttc
tgtaaggagttgggtctgctggggttccactccctggctctcatctccagaaccttcctc
tctatctacgtggccaacctggacggcatgatagtgaagaccattgtgaagaaggacccc
caggcgtttgtgtgggagttgacaaaatggctgctcattgctgtcccggccacctttgtg
aacagcgctatccgttacctagagggacagctggccctggccttccgcacgcgcttggta
acccacgcctataagctctacttcagcaaccaaacatactaccgcgtcagcaacatggac
ggacgcctcgccaacccagaccagtctctgacagaagacatggtgatgtttgctgcatct
gtggcccacctgtactccaacctgaccaagccgtgtctggacgtggtggtgacctgttat
accctcctcaggacagcggagtctaaaggagccaacaccacctggccgtccgtcatcgcc
ggcgtggtcgtggcaatcaccgccaaggttctgaggatgttctcgccgcggtttgggaag
ctagtggtggaagaagcccggaggaaaggagagttgaggtacatgcactcgcgcatcatc
gccaactcggaggagatcgccttctacggaggacacaaggtggagatgtcccagctgcag
cgctcctaccgctccttgtcgtcccagatcaacctgatcctgtttaagcgtctgtggtac
gtgatgctggaacagttcctgatgaaatacctgtggagtgcctcgggactcgtcatggtg
gctgtaccaatcatcaccgccacagggtactccagatatgactccgaggatgtgaagcag
ttggccatgaatttgaaagaggaggacctagtgagtgagagggctcaggccttctccacc
gctcggaacctcctcaactccgccgcagacgccgtcgagagaatcatgagctcttataag
gaggtgaccgagctggctggctacacagcccgcgtgcacgagatgttcactgtgttcgag
gacgtgcgtgcgggcgtgttccgtcgctctgcggagggaggagatgagcagacgggggga
ggaacacagctggtgcagcacggcatgagggtggagggaccaatcatgatacgaggtcag
gtgatagacgtggaaaagggcatcagctgtgagaaccttcccatcatcacaccgacagga
gacgttgtcgtgtccagcctcaacatcaaggtggaggaaggtatgcatctgttgataaca
ggacctaacggctgtgggaagagttctctgttcaggatcctcagtggtctgtggccagtc
tatggaggggtgctttacaaaccaccaccccaaaacatgttctacatacctcagagaccg
tacatgtcagtgggaaccctgcgagaccagttgatctacccagacaccgagaccgagatg
gaggagagaggattcacggaccagcagctagaggggatcctcggaaccgtcaacctggtc
tacatactggagagggaaggcgggtggagtgcagaaagcgactggaaggatgtgttgtca
ggaggagagaaacagaggattgggatggcacggatgttctaccacaggcctaagtatgcc
ctgctagacgagtgcaccagcgctgtcagcatcgacgtggaggggaagatcttccaggca
gcaaaggatgctgggatagcactgctgtcgataacccatcgaccctccctctggaagtac
cacacccacctgcttcagttcgacggagagggtggctggcgctttgagaggctggacgcc
tccacacgtgtctctctccaggatgagaaacagaagctggagtcccagctctctgggata
cccaagatgcaacagcgcctgtcggatctctgccgcatgctgggggaggacgccaccctg
tcaggaaccggaggagaggaagcgggggaggaggaggagaaggaagcaggggaggatgag
aaactggaggagaaggagaaggaagagtga
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