Oncorhynchus mykiss (rainbow trout): 110532856
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Entry
110532856 CDS
T07259
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110532856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110532856
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110532856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
110532856
NCBI-ProteinID:
XP_036829237
UniProt:
A0A8K9UK91
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
MSRHRNVRGYNYDEDLDDDDLYGQSVDDDYCISPATAAQFIYSSRQERPNVEPPLEEEEM
EEDEAIHTSPTLTHNLNPLDQGKLYSCLDLMRAVLGDAVPESVLTQAALRCAFDPQRALD
AVLSDESAGLPHLDARTNNDAPLPQRANKETAVVPRANQEASAAPRPEKAKDRDAGQCQL
DSEVLPKVARMTVSGKKQTMGFDVPSTEENGVVPSPSVHRGGSPDDIMTMKTSPETPSKR
PETPSKGFGGAEEPPSVPTPGRTPGKAKQQLNVRAELEKRQGGKSLLNLVVIGHVDAGKS
TLMGHLLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERNRGVTMDVGMTKFE
TASKVVTLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHGLLVR
SLGVTQLAVAVNKMDQVNWQQERFKEIISKLGHFLKQAGFKDSDVFYVPTSGLSGENLTT
KSSALALTSWYSGPCLLEQIDYFKPPQRSIEKPFRLCVSDVFKDQGSGFCVTGKIEAGYI
QTGDRVLAMPPNETCTVKGISLHDDPLDWAAAGDHVSLTVTGMDIIKINVGCVFCDIKEP
IRACSRFRARVLLFNIEVPITQGFPVVLHYQTISEPATIRKLVSVLHKSSGEVLKKKPKC
LGKGMNAMVEIQTQRPVALELYKDFKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcacagaaatgtccgaggctacaactatgatgaagaccttgacgatgacgat
ctttatggacagtctgttgacgatgattactgcatctcccctgctacagcagcccagttc
atctactccagcaggcaggagagacccaacgttgagccacccctagaggaggaggagatg
gaggaagatgaggccatacacacctctcccaccctcacacacaacctcaaccccctggac
caaggcaagttgtactcgtgtctggacctgatgcgtgcagtgctgggtgatgccgtgcca
gagtcggtccttacccaggctgccttgcggtgcgccttcgaccctcagagagccttggac
gccgttctctcagacgagagcgccgggctgccgcacctggacgccaggaccaataatgac
gcaccgctgccgcagagagcaaataaggagacagcagttgtaccaagagccaatcaggaa
gcctcagctgcaccgcgaccagagaaagctaaggaccgtgatgcggggcagtgtcaactg
gactcagaagttctgcctaaagtggcccgcatgaccgtctcagggaagaaacagaccatg
ggctttgacgtgccgagtacagaggagaacggggttgtccccagcccctccgtccatcgt
gggggtagccctgatgacatcatgaccatgaaaaccagccctgaaaccccctccaagcgt
ccggagacaccctctaaagggttcgggggggcagaggagcccccttccgtccccacccca
ggacgtaccccggggaaggccaagcaacagctgaacgtcagggcagagctggagaagaga
caagggggcaagtctctactcaacctggtggttataggtcatgtggatgctgggaagagc
actctgatgggtcacctgctgtacctgttgggaaacgtcaataaacgcaccatgcacaag
tacgaacaggagtccaaaaaggctggcaaggcctcgttcgcctacgcatgggtcctggat
gagaccggggaggagaggaacaggggtgtaaccatggacgtggggatgactaagtttgag
acggcctctaaggtggtgactctgatggacgctcctggacacaaagacttcatccctaac
atgatcactggagcggcccaggcggacgtggcggtgttagtggtagatgccagcagaggt
gagtttgaggcagggttcgaggcaggtggtcagacgcgagagcacggccttctggtccgt
tcgttgggcgtcacgcagctcgctgttgccgtcaacaagatggaccaggtaaactggcaa
caggagcgattcaaagagatcatctccaaacttggacatttcctgaaacaggctggattt
aaggactctgatgtgttctacgtgccgaccagtggtctatcaggagagaacctgaccact
aagagttctgctctggcgctaacatcctggtactctggaccctgtctgctggaacagatc
gattatttcaaaccaccccagaggtcgatagaaaagcccttccgactgtgtgtctcggac
gtcttcaaagatcagggctcagggttctgtgtaacagggaagatcgaggcgggctacatt
cagacaggagaccgagtactggccatgccccccaatgagacatgcactgttaaaggtatc
tctctccacgatgatcctctggactgggcagcagcaggagatcatgttagtctgaccgtc
actggcatggacatcatcaagattaatgtgggctgtgtgttctgtgatattaaggagcca
atcagagcgtgttcccgcttcagggccagagtcctgctcttcaacatagaggtccccatc
acacagggcttccccgttgtgttgcactaccagacgatcagtgaaccggccaccattagg
aagctggtcagcgttctgcacaagagcagcggggaggtgctcaagaagaaacccaagtgt
ctgggtaagggtatgaacgcgatggtggagatccagacccagaggcccgtggcgttggag
ctctataaggacttcaaggagctgggacgcttcatgctgagatacgtagggtcaaccatc
gctgccggggtcgtcaccgagatcaaagaatga
DBGET
integrated database retrieval system
