Oncorhynchus mykiss (rainbow trout): 110532947
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Entry
110532947 CDS
T07259
Name
(RefSeq) RNA-binding protein 4B-like
KO
K13187
RNA-binding protein 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110532947
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110532947
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GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RNA_bind
RRM_7
Calcipressin
Motif
Other DBs
NCBI-GeneID:
110532947
NCBI-ProteinID:
XP_036843409
UniProt:
A0A8C7QBQ5
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Position
9:19070843..19073771
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AA seq
349 aa
AA seq
DB search
MVKIFIGNLPREADKDEIQVLFSQYGAVTECAIVKNFAFVHMDDRKSATKAIRSLHLYKL
HGTAINVEASRGKNQGAVKLHVTNVEKGNDDELRTLFEEYGTVSECAIVKNFAFVHMDNS
DEAMDAIKGLDNIEFQGKRIHVQISKSRPRYEEEDDYPPPPPERGGYWPPRGYPGERHDP
PPPSYLRGRHPPPHHGYPAPPPPPPPPRRAPYPERAYERERQSYAVVDYYEKYRARPAPY
GIMTYDERRVGSLPPPPPPPSSMVRERFMTSGLDPYERRPLPPPPSAYYARDRSPIRRAP
PPPMPPAGNGYSYERSRLSPISRPAMYNLPRTREPYADRLPPPPAARYY
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagatcttcattgggaacctccctcgggaggcagacaaggatgaaattcaggtg
ttgttctcccagtacggtgccgtcacagaatgcgccatcgtcaagaattttgctttcgtc
cacatggacgaccgtaaatctgccaccaaagccatccgcagcctgcacctctacaagctg
catggcacggcgataaatgtcgaggctagtcgcgggaagaaccagggagccgtcaaactc
cacgtgacaaacgtggagaaaggcaacgatgatgagctccgcactttgttcgaggagtac
ggcacagtctctgaatgtgctattgtcaaaaactttgcgtttgtacacatggacaactcc
gacgaggctatggatgccatcaagggattagacaacattgaattccaggggaaacgtatc
catgttcagatatcaaagagccgtcccaggtacgaggaggaagacgactaccccccaccc
ccacctgagaggggggggtactggcccccccgtggctaccccggggagaggcatgatcct
ccaccccctagctatctaagaggtcgtcacccaccccctcatcacgggtaccctgccccc
cctccaccaccccctccccctagacgagccccttacccagagcgtgcttatgagcgcgag
aggcagagttatgccgtggtggattactatgagaaatacagggctcgccctgccccttac
ggcataatgacctatgatgagaggcgtgtaggctccttaccccctcctcccccgcccccc
tcttccatggtcagggagcgtttcatgacctctggcctcgatccatatgagcgtcgcccc
ctccctccccccccctctgcgtactacgccagggaccgcagtcccattcggagggcccct
cctccccccatgccccccgccggtaacggttactcctatgagcgttcccgactctctccc
atctctcggcccgcgatgtacaacctaccccgtaccagagagccctacgccgacaggttg
ccgccgccgcctgcggctcgctattactaa
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