Oncorhynchus mykiss (rainbow trout): 110533130
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Entry
110533130 CDS
T07259
Name
(RefSeq) neurexin-2-like isoform X1
KO
K07377
neurexin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110533130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110533130
Membrane trafficking [BR:
omy04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
110533130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
110533130
NCBI-ProteinID:
XP_036789118
LinkDB
All DBs
Position
10:47426618..47849279
Genome browser
AA seq
1659 aa
AA seq
DB search
MISSKVLCEGRAMWPLVLTGLLLTVMATALEYEGVPGQWARYGRWEAKVTGELSFTLKTN
ISKALVLYLDDGGNCDFLELLITDGRLHLRFTIHCAEPASLHTETHVNDQRWHRVLLTRN
YRATTLVVDNEEKVAEVKSKRSEMVVASDLYVGGISPDVRLSALTSNTVKYEPPFQGLIA
NLKLGENLPVLLDGQSVQNDLEYLCIKQNPCSNRGLCSIHQGEVLCDCTNTGYKGNYCHE
AIQKSEEGLAHMKSNRQAESLQSAQEESVATYKGNEFFSYDLSQTPIQSSLDEISLSFRT
LQRNGLLLHTGKSADYVNLSLRSGAVWLVINLGSGAFEALVEPANGKFNDNAWHEVRVTR
NLRQVTVSVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKNVV
YKNNEFRLELSRLAAERDPQVSVHGDLTFRCEDVAALEPVTFDTPAAYLTLPRWKTKKTA
SISFDFRTTEPSGLLLFSHGDRRLQGPDRQPERQPRADYFAMELLDGFLYLLMDMGSGSI
KMKASNKRVNDGEWCHVDFQREGRKGLISVNSRSIPFSANEGSEILDLEGDMYLGGLPEA
RQGLILPPEVWTAPLNLGYVGCMRDLFMDGRSRDLRRLAEIQSASGVSSFCTRETHIRCG
RDVCANGGQCREGWNRHVCDCTSTGYLGPNCESEATVLSYDGSMYLKVTLPLSMHMEAED
VALRFMSQRAFGLLVATTSQDSADTLRLELDGGRVKLTVNLDCIRIDCNLSKGPEMLLAG
QKLNDNEWHSVKVVRRGKNLHLSVDNVTVEGHMTGVHTRLEFHNIETGIMTERRFISVVP
SNFIGHLQALSFNGVPYLDQCKNGDISYCELNARFGMRRIVADPVTFHSRASCLAFSTLQ
AYASMHLFFQFKTTSLDGLLLFNSGDGSDFIVVELVKGYIHYVFDLGNGPSLMKGNSEKP
LNDNQWHDVVVSRDNNNVHILKIDTRTVTQHSNGARNLDLKGELYVGGVGKSMYSSLPKL
VASRDGYQGCLASVDLNGRLPDMMADALHRVGQVERGCGGLSTTCTEDSCHNQGVCLQQW
EGFSCDCTMTTYRGAFCSDPGTTYIFGRGGALITYTWAPNERPSTRADRLAVGFSTQQKD
AILVRVESTSGLGDYLQLHIEQGKIGVIFNVGTDDITIDEPAVIVSDGKYHVVRFTRSGG
NATLQVDNQPVERYPPGNFDNERLVIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQAAIK
IGGQDKGRPFQGQISGLYYNGLQVLTLAAENDPSVQAEGNLRLVGDSLSVLTTETTSTTP
LAASDMSTTIMETTTTMATTTTRRQRSPSMRESISQSQNSDDILVASAECPSDDEDLEEC
EPGTGGELVLPIITVDSLEPPSIATRYPAIPPPPTSLSPLETTKVSLMLSNPHPPCPPDQ
EDCGDPVEVSAFGSGEMTESDDEDFYKNSPLVTDRTVLHPPPPPAVGEGGAQKPHNPRPL
PYAPTTNPDQLHIPAGKMNTRDQVLLPPAPPSSRYTPGLTYPPNFPHVPTADPTAPGEKV
MHPGLVDRIGESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYQTDQGHNFISNP
VSEGNGAMVKLEKTPSTTTAAVAKTVTKGKKNKDKEYYV
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atgataagtagcaaggtgctatgtgaaggccgggctatgtggcccctggtattgactggg
ctgttgttgacagtcatggccacggccttggagtacgagggagtccctggccagtgggcg
cggtacggccgctgggaggccaaggtcacaggcgagctgagcttcactctgaagaccaac
atcagcaaggccctggtgctctacttggacgacggagggaactgtgacttcctggagctg
ctgatcacagacggccggctgcatctgcgcttcaccatccactgcgcggagcctgcctcc
ctgcacacggagacccacgtcaacgaccagcgctggcaccgcgtgcttctcacccgcaac
tatagagcgaccaccctggtggtggacaacgaggagaaggtggccgaggtcaagtccaag
aggagtgagatggtggtggccagtgacctttacgtaggcggcatctcgccagacgtgcgc
ctatctgctctcacgtccaacacggtcaaatatgagccacccttccagggactgattgcc
aacctgaagctgggggagaacctcccagtgctcctggatggccaaagtgttcagaatgat
ttggaatacctgtgcattaaacagaacccctgcagcaacagaggcctctgctccatccac
cagggagaggtcctctgtgactgcaccaacactggctacaagggaaactactgccacgaa
gctatccagaaatcagaggaaggtctggcgcacatgaagtcaaaccgccaagccgaatca
ttgcaatctgcacaagaggagtcagtggccacctacaaaggcaacgagtttttcagctat
gacctgtctcagacgcccatccagagcagcctggacgagattagtttgtccttccgcacg
ctgcagaggaacgggctcctgctccacaccgggaaatcagctgactacgttaacctatcc
ctgaggagtggcgctgtgtggctggtcatcaacctcgggtccggggccttcgaggccctg
gtggagcctgccaacggcaagttcaacgacaacgcctggcacgaagtccgtgtcacgcgc
aacctgcgccaggtgaccgtctctgtggatgggatcctgaccaccaccggctacacccag
gaggactacaccatgctgggctcggatgacttcttctacattggggggagtcccaacacg
gctgacctcccaggctccccggtcagcaataacttcatgggctgtctcaaaaacgtggtc
tacaagaacaacgagttcaggctggagctgtctcgtctggctgcagagcgggaccctcag
gtcagtgttcacggcgacctaaccttccgctgtgaggacgtggcggccctggagccggtc
accttcgacacgcccgccgcctacctcaccctgcccaggtggaaaaccaagaagactgcc
tctatctcttttgacttccgcactacggagcccagcggcctgctgctgttcagccacggt
gacaggcgtctgcagggcccagacagacagccggagaggcagcccagggctgactacttt
gctatggagctcctggacggcttcctctacctgctgatggacatgggctctggcagcatc
aagatgaaagccagtaacaagagggtcaacgatggggagtggtgccacgtggacttccag
agggaggggcgcaagggcctgatctcagtgaacagccgcagcataccattctctgctaac
gaaggcagtgagatcttagacctggagggtgacatgtacctcgggggtctgcccgaggca
cgccagggcctcatcctccccccggaagtctggacggcccccctcaacctgggctacgtg
ggctgcatgcgtgacctgttcatggatgggcggagccgggacctgaggagactggcagag
atccagagtgcctctggagtcagcagcttctgcaccagggaaacgcacatcaggtgtggc
agagatgtctgtgccaacggtgggcagtgccgcgagggctggaaccgccacgtgtgtgac
tgcaccagcacgggctacctgggccccaactgtgagagcgaggccacggtgctgagctac
gacggcagcatgtacctgaaggtgacgctgccgttgagcatgcacatggaggccgaggat
gtggcgctgcgctttatgtcccagagggcctttgggctgcttgtggccactacctcccag
gactcagctgacaccctgcgactggagctggacgggggccgggtcaaactcaccgtcaac
ctggattgtatcaggatagactgtaacctcagtaaaggcccagagatgctgttagcagga
cagaagctgaacgacaacgagtggcactcagtgaaggtggtgcgtcgcgggaagaacctg
cacctctctgtggacaacgtgactgtggaaggccatatgaccggtgtccacactcgcctg
gagttccacaacattgagacgggcatcatgaccgagcgccgttttatctccgtggtgcca
tctaacttcatagggcacctgcaggccctctcgttcaatggcgtcccctacctggaccag
tgtaagaacggagacatctcctactgcgagctcaacgcccgcttcggcatgcgccgcatc
gtggctgaccctgtgaccttccacagtcgggctagctgcctggccttctccaccctgcag
gcctacgcctccatgcacctcttcttccagttcaagaccaccagcctcgacggcctgctg
ctcttcaactctggagacggcagtgacttcatcgttgtggagctggtcaaagggtacatt
cattatgtgtttgacctgggcaacgggccgtctctcatgaagggcaactctgagaagcct
ctcaacgacaaccagtggcacgacgtggtggtgtcccgggacaacaacaatgtgcacatc
ctcaaaatcgacacccgcaccgtcacccagcactccaacggagcccgcaatctggatctc
aaaggggagctgtatgttggtggtgtagggaagagcatgtacagcagcctgcccaagctg
gttgcctcccgggacgggtaccagggctgcctggcctctgtggacctgaatgggagactc
cctgacatgatggcagatgccctccacagggtgggccaggtggagcgcggctgtggaggc
ctgagcacaacctgtacagaggactcctgccataaccagggggtgtgtctccagcagtgg
gagggcttctcctgtgactgcaccatgaccacctacagaggagcattctgcagtgaccct
gggaccacgtatatctttgggagaggaggggccctcatcacgtacacctgggcccccaac
gagcggccgagcaccagagcagaccggctagctgtgggcttcagtactcagcagaaagac
gccatcttggtccgagtggagagcaccagcggactgggagactacctgcagctacacata
gaacaaggaaagattggcgtgatcttcaacgtggggacagacgacatcaccattgatgag
ccggctgtcatagttagcgatggcaagtaccatgttgtgcgcttcacacgcagtggtggc
aacgccaccctccaggtggacaaccagccggtcgagcgctacccaccagggaactttgat
aatgagcgcctggttattgctagacaaagaatcccataccgacttggtcgggtagttgac
gagtggctactcgacaaaggacgacagctgactatcttcaacagccaggcagcgataaag
atcgggggtcaggataagggccggccgttccagggccagatctctggcctctactataat
ggcctgcaggtgctgacgctggcggcagagaatgaccccagtgtccaggctgaggggaac
ctgaggctggtgggagactccctgtctgtgctgaccactgagaccacctccaccacccca
ctggcagcctccgacatgtccaccaccatcatggagaccaccaccaccatggccaccacc
accacccgcaggcaacgctcacccagcatgagggagagcatctcccagtctcagaactcg
gatgacatcttggtggcttctgctgagtgtcccagtgatgacgaggacctggaggagtgt
gagcctggaacaggaggtgaattagtgttgcctataataacagtggattcccttgagccc
ccatccatcgccacccgttaccctgctatcccccctcctcccacctccctgtccccactt
gagaccaccaaagtgtccctgatgctgtccaaccctcaccctccctgccccccggatcag
gaggactgcggtgaccctgtggaggtctcggccttcggttctggggagatgacggaatca
gatgatgaggacttttacaaaaactcccctctggtcactgataggacagtcctgcatcct
cctcctccccccgccgtcggtgagggcggggcacagaaaccccacaatccccgccccctt
ccttatgctcccaccaccaaccctgaccagctccacatccctgcgggcaaaatgaacacc
cgtgaccaggtgcttctgccccctgcccctccgtcatcccggtatacacctggactaact
tacccccccaatttcccccatgtgcccacagccgaccctacagcccccggtgagaaggtc
atgcaccccggcctggtggataggatcggagagtccagtagcaccacagggatggtggtt
ggcattgtggcagctgctgccctctgcattctcatcctcctctacgccatgtacaagtac
cgcaaccgtgacgagggctcctaccagacggaccagggacacaacttcatcagcaaccca
gtttccgagggcaacggggccatggtcaagctagagaagacaccaagcacaaccacggct
gcagtagctaagacagtaaccaagggcaagaagaacaaagacaaagagtattatgtctaa
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