Oncorhynchus mykiss (rainbow trout): 110533361
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Entry
110533361 CDS
T07259
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04080
Neuroactive ligand-receptor interaction
omy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110533361 (gabra1)
04082 Neuroactive ligand signaling
110533361 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110533361 (gabra1)
Ion channels [BR:
omy04040
]
Ligand-gated channels
GABA-A
110533361 (gabra1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
110533361
NCBI-ProteinID:
XP_021473157
Ensembl:
ENSOMYG00000033134
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All DBs
Position
10:complement(13097380..13126840)
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AA seq
470 aa
AA seq
DB search
MTNHSPTMGGRTGTAILLCVWACLLVAKVLCGKSSGQNGQTDEQKDNTTVFTRILDSLLD
GYDNRLRPGLGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMAVL
RLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLE
DFPMDAHACPLKFGSYAYTRAEVVYVWTRGAAQSVVVAEDGSRLNQYDLMGQSVDSGVVQ
SSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL
TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVP
EKQKKKKESLLKKNNTTAYTAATATAFAPNIARDPGLATIAKSAPPPPTEPKEEPKPKPP
EAKKTFNSVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGMTPGSH
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaccactctccaaccatgggtggacggacaggaacggccatactgctatgtgtg
tgggcctgtttgctggtggccaaagtgctttgtgggaaaagctctggacagaatggccag
acggacgagcagaaagacaacacaacagtgttcacccggatcctagacagtcttctagat
ggctacgacaatcgtctcagaccagggttgggagagcgtgtaactgaagtcaagactgac
attttcgtgacgagtattgggcccgtctcggaccatgacatggaatacaccattgatgtg
ttcttccgtcaaagctggaaggacgagcggctaaaatttaaagggccaatggcggttctc
cgtttgaacaacctgatggccagtaaaatctggacccctgacacattctttcacaatggc
aagaagtctgtggcacacaacatgactatgcccaacaaactcctacgaatcacagaggag
ggaactctgctctatactatgagactgaccgtaagggcagagtgtcccatgcacctggag
gacttccccatggatgcccatgcttgcccactgaagttcggcagctatgcttacaccagg
gctgaggttgtgtacgtgtggacgagaggggcagcccagtctgttgtggtggctgaagat
ggctctcggctcaaccagtatgatctgatggggcaaagcgtggactctggggttgtccag
tccagcacaggagagtatgttgtcatgacgacacacttccacctgaagaggaagattggt
tattttgtcatccagacgtacctgccctgcatcatgacggtgatcctgtcccaggtgtcc
ttctggctcaacagagagtccgtcccagccaggactgtgttcggagtgacaactgtgctg
accatgaccaccctcagtatcagtgctaggaactctcttcccaaggtggcctatgccaca
gccatggactggttcattgcagtctgctatgcctttgtcttctctgccctcattgagttt
gctacagtcaactacttcacaaagaggggctacgcctgggatggaaaaagtgtggtgcca
gagaagcaaaagaagaagaaggagtccctcctgaagaagaacaacaccaccgcctacact
gccgccactgctacagctttcgctccaaacattgccagagatcctggtttggccaccatt
gccaaaagtgctccccctccccccactgagcccaaggaagagcccaagcccaagccacca
gaggccaagaagaccttcaacagcgtcagcaagatcgacaggatcgccagaatagccttc
ccgttactctttggaacctttaacctggtctactgggcaacttacttgaataaaaagcct
aaattacagggtatgaccccaggatcccactaa
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