Oncorhynchus mykiss (rainbow trout): 110533362
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Entry
110533362 CDS
T07259
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04080
Neuroactive ligand-receptor interaction
omy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110533362
04082 Neuroactive ligand signaling
110533362
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110533362
Ion channels [BR:
omy04040
]
Ligand-gated channels
GABA-A
110533362
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
DUF2070
Motif
Other DBs
NCBI-GeneID:
110533362
NCBI-ProteinID:
XP_021473163
Ensembl:
ENSOMYG00000033134
UniProt:
A0A8C7SYP1
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Position
10:complement(13140294..13161952)
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AA seq
468 aa
AA seq
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MEIITVDHGFVAVECLRGMAFVFNCFFLSCVSNVWGNHVKSTQTENIYLDNITRVLDRLL
DGYDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEI
LRLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRL
MNFPMDGHACPLKFGSYAYPMSEIVYTWKKGPLFSVEVPEESSSLLQYDLIGQTVSSERL
KSNTGEYVVMTVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTV
LTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKAA
SIKAAQEAAEVGRTDGESSSDASSMLKKRMNSTPHFERPAEVFPNPPVNAQAFLQQGSAV
PSNNLLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMEMTRDSV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggaaattataacagttgaccacggctttgtggctgtggagtgtttacgaggcatggct
ttcgttttcaattgtttttttctgtcctgtgtgagcaatgtttggggaaatcatgtgaaa
tcaacgcaaactgagaatatctatttggataacatcacgcgtgtattggatagattacta
gatggatatgacaacagactgcgacctggatttggaggtccagttactgaggtcaaaaca
gacatctttgtcacaagttttggtccagtgtcagatgttgagatggagtacaccatggat
gtatttttccgtcaaacgtggattgacgagaggttgaaattcgagggccccatcgagatt
ctgcgtctcaacaacctcatggtcagcaagatctggacaccagacacattcttccggaat
ggcaagaggtccatctctcacaacatgaccactcccaacaagctgttccgcatcatgcag
aacggaactatcctctacactatgagattgacgataaacgcagagtgtcccatgagactg
atgaacttccccatggatggccatgcctgtcctctcaagtttggtagctatgcctaccct
atgagtgaaattgtgtacacatggaaaaaaggaccactgttctctgtggaagtcccagag
gagtcctccagcttgctacagtacgatctaataggacagacagtgtccagtgagaggtta
aaatccaacactggtgaatatgtagtcatgactgttcacttccacctgcaaaggaagatg
ggcttcttcttgattcagacatacatcccctgtatcatgaccgtgatcctggctcaggtc
tctttttggatcaataaggaatcggttcctgcacgaactgtattcggcattaccacagtg
cttaccatgaccacactcagcatcagcgcccgccactctttgcccaaagtctcttacgcc
acggccatggactggttcatcgctgtgtgtttcgccttcgtcttctcagccctcattgag
tttgccgcagtcaactacttctccacgctgcaggccaaccgggagctccgcaaggcggcc
tccattaaggcagcccaggaggcagcagaggtcgggaggaccgacggggagtcctcttcg
gatgccagcagtatgctgaagaagaggatgaactccacgcctcactttgagagaccagcg
gaggtgttccctaaccctccagtgaatgcccaggccttcctccagcaaggctcagccgtg
ccgtccaacaacttactgacgggcaccagcatcatagacaagtactctcgcatcctcttc
cctctgtcgttcggggccttcaacctggtgtactggatcgtctatctcaccaaggacacc
atggagatgacaagggacagcgtgtga
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