Oncorhynchus mykiss (rainbow trout): 110533411
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Entry
110533411 CDS
T07259
Name
(RefSeq) protein transport protein Sec24A isoform X1
KO
K14007
protein transport protein SEC24
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110533411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110533411
Membrane trafficking [BR:
omy04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110533411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
110533411
NCBI-ProteinID:
XP_021473244
Ensembl:
ENSOMYG00000018809
LinkDB
All DBs
Position
10:15499633..15523339
Genome browser
AA seq
1135 aa
AA seq
DB search
MSSTGFNFQNGPGGQPYANGPLQNQVVLQPPGPGYNMAHQPPYNPMQAKGPMPPGPGLYN
SGPYQPIPPVSSYQASPGQPMLNRPPMGPPHPMTPPQSTSPCPGLRMPPAQVTPALPVSA
NSYYQHPPAWQYGALPLMGAPPPMGAPPPMATPPLAFVDNHVTSSPNLAPLQAPSAGYSA
APSPVYHNAMQPSGPPLPPTSLHRSTQPGSAPPPMNPVAAPHTYQPGMTAPYGHPPTGPT
PSMRPTPPPMGNATPPLPFGAKTDAQCGSDASDDAAHTEYDNQENDIECPGHIPTPANGA
QVPNSFDHLETSPKMAGPPQQPAPPVRHMGLSYPSLPPGYQNTSASPMQAQTQPYSHAPQ
SYQQPSAGPAQLSPSLAGLSLQSQTPETLRVVNLLQERNLLPPGPITPPTPCLPQDLQKI
NCHPEVFRSTLTNIPQTQSLLNKAKLPLGLLLHPFKDLSQLPVVTSSTIVRCRSCRTYIN
PFVTFLDQRRWKCNLCYRVNDVPEEFMYNPVTRSYGEPHKRPEVQNATIEFIAPSEYMLR
PPQPAVYLFVLDVSHNAVETGYLDVVCQSLLENINALPGDSRTKIGFISFDSTIHFYNLQ
EGLAQPQMLIVSDIEDIFLPTPDSLLVNLNECKELVQDLLKSLPQMFGKTMETQSALGPA
LQAAFKLLSPTGGRVSVFQTQLPKLGVGALKSREDPNQRASAKDIPNLSPATDFYKKLAL
DCSGQQVAVDLFLLSSQYCDLASLACISRYSAGSVYYYPSYQQQHNPAGVECFQKDLKRY
LTRKIGLEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGFAVQMSIEENLVDM
QSVSFQAALLYTSSKGERRIRVHTMCLPVVNSLSDIFAGADVQAITGLLASMAVDRSVTS
SLSDARDAMTNASIDSLTSYRTSVLTIQQPGLLAPACLRLFPLYILALLKQKAFRTGTST
RLDDRVFAMCQLKYQPLAYVMLMIHPALYRVDDLTDEGALNISERAIPQPRVQQLSVEKL
SREGAFLMDAGSVIYIWIGRNCNPDFLTQVLGVPDYAAVPQNMNLLPELDTAESQRTRAF
VGWLREQRPFFPILHVIRDESPLKASFMQNMIEDRTESALSYYEFLLHVQQQVSK
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtacggggttcaactttcagaatggaccaggaggacagccatacgcaaatggt
cccttacagaatcaagtagtgctgcagccaccaggaccgggttacaacatggcccaccag
cctccatacaacccaatgcaagccaagggccccatgccacctggccctggactctataac
tctgggccctaccagcccatcccaccagtcagctcttaccaggcctccccaggtcagccc
atgttaaacaggcctcctatgggacctccccaccccatgacaccccctcaatccaccagc
ccttgcccaggcctcaggatgcccccagcgcaggtcacccctgctctacctgtgtctgct
aacagctactaccagcaccccccagcctggcagtatggggcccttccactgatgggagct
cctccaccaatgggggcgccgcctcctatggccactcctcccctcgcgtttgtggataat
cacgtgacctcctcgcctaacttggcaccactccaggccccctcggcggggtacagcgct
gctccttctcctgtctaccacaacgccatgcaaccctcgggtcctcccttgcctcctacc
tccctccacagatccacccagccaggctctgcccctcctccaatgaaccctgtggctgct
cctcacacataccagccaggtatgacagcaccttacggccacccacctacaggacccaca
ccctcgatgagacccactccaccccccatgggcaatgctacccctccccttccctttggc
gccaagactgatgctcagtgtgggagtgatgctagtgatgatgctgcccacactgagtac
gacaaccaggagaatgatattgagtgtccaggacacatacccacacctgctaatggcgct
caagttcccaacagctttgatcacttggagacaagccctaaaatggctggcccaccccag
cagccagccccccctgttcgacacatgggtctgtcctacccctctttacccccagggtac
cagaacacctccgcctcccccatgcaggcccagacgcagccttacagccatgcacctcag
tcataccagcagccgtctgcaggtccagcccagctgagcccctccctggctggtttgagt
ctgcagtcccagacccctgagaccctgagggtggttaacctgctgcaggagaggaacctg
ctccccccgggccccatcacccctcctacaccctgcctgccccaggacctgcagaaaatc
aactgtcacccagaggtcttccgcagtaccctgaccaacatcccccagacccagtctctg
ttaaacaaagccaagcttccactcggcttgctgctccaccccttcaaagatctctcgcaa
ctgcctgtggtcacctccagcactatagtgcggtgtcgctcctgcaggacatatatcaac
cccttcgtgaccttcctggaccagaggagatggaagtgtaacctgtgctaccgggtcaac
gacgttccagaggaattcatgtacaacccagtcaccagatcgtacggagagccacacaaa
agacctgaggtccagaacgccaccatcgagttcatcgcaccctcagaatacatgctgaga
cccccccagcctgccgtttatctcttcgtgctggatgtatcccacaacgccgtggaaacg
ggatacctagatgtcgtctgtcagtcactgctggagaacatcaacgcgctccctggagac
tccaggacaaagattggcttcatctcctttgacagcaccatccacttctacaacctccag
gaaggcctggcccaaccacagatgctcatcgtctcggacattgaagatatatttttacca
acaccagacagccttttagtgaacctcaatgaatgcaaggagctggtgcaggatctgctg
aagagcttgccccagatgtttggcaagaccatggagacccagtctgctctgggcccggcc
ctgcaggcagccttcaagctgctgtcgcccaccggggggcgcgtgtccgtcttccagacc
cagctgcccaaactgggcgtgggggccctcaagtccagagaggaccccaaccagagagct
tcagccaaggatatcccgaacctgtctcctgccacagacttctataagaagctggccctg
gactgttcaggacagcaggtggctgtggacctattcctactgagctcccagtactgtgac
ctggcctctttagcttgcatatccaggtactcagcaggaagtgtgtactactacccctca
taccagcagcagcacaacccagccggggttgagtgcttccagaaggatctcaagaggtac
ctcaccaggaagattggcttggaggctgtaatgaggatccgctgcactaaaggtttgtcc
atccacacgttccatgggaacttctttgtgcgctccacggatctgctgtccctgcccaat
gtgaacccagacgcgggctttgctgtgcagatgtccattgaggagaacctggtggacatg
cagtccgtctccttccaggctgcgctgctctacacatccagcaaaggagagagaagaatt
cgagtccacaccatgtgtttgcctgttgtcaactccctgtcggacatctttgctggggct
gatgtccaggccatcactggtctgctggctagcatggctgtggatcgctcggtgacgtcc
agtttgagtgacgcccgggacgcgatgaccaacgcttccattgactctctgacatcctac
cgcacctctgtgctcactatccagcagcctggcctcctggcccccgcctgcctcaggctg
ttccccctctacatcctggccctgctcaaacagaaagccttccgaaccggtacaagcacc
aggctggacgaccgtgtgtttgccatgtgtcagctgaagtaccagcccctggcctacgtc
atgctgatgatccacccagcgctgtaccgcgtggacgacctgactgacgagggagccctg
aacatcagtgagcgtgccatcccccagcccagagtccagcagctgtctgtggagaagctg
agcagagagggggccttcctcatggatgctggctcggtgatctatatctggatcggaaga
aactgcaaccccgacttcctcacgcaagtcctgggggtcccagactacgctgctgtgcct
cagaacatgaaccttctcccagagttggacacggcagagtcccagagaaccagagcgttt
gttggctggctgagggaacagaggccctttttccccatcctgcatgtcattagggatgag
agcccactgaaagccagctttatgcagaacatgattgaggatcggacagagtcggcccta
tcttactatgagtttttactccacgtccaacagcaagtctccaagtaa
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