Oncorhynchus mykiss (rainbow trout): 110533476
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Entry
110533476 CDS
T07259
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110533476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110533476
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
110533476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
110533476
NCBI-ProteinID:
XP_021473400
Ensembl:
ENSOMYG00000005978
UniProt:
A0A8K9XFE8
LinkDB
All DBs
Position
10:complement(20633418..20648838)
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AA seq
2104 aa
AA seq
DB search
MAASAASAGSTPGFCPSYAVICSFLERYGTLLDLPELTFPQLERYLQDTISVPKILVDLH
VKLLRKIGKSVSADRWEKYLVKVCHEFNSTWAWELENKGYKDMSVEYKTGILKHLCECQF
DDNVKFKTAINEEDPDKMRLLPIGKDKDGLMYWFQLDQDKNVRVYVEEQDDLDGSSWKCI
VRDRNSLAEILALLKTQIDPALLTKKEGEEEDEAKNNTGGEGEVKKTEDTSEDEEDKPSK
GTTSLVSPKTEITEKEESQLDESDAKSSLNGLKDESESKSQSEEPMVDDKVTINTRAIKE
EPMEVSESKESTATNATEPLAEKPCLTPQTEQTDEAKRKTANELQRAMKNDQQAKIPLKK
REMKLCENFDNNSGGGSSIFVQNPSVAPVKEAPEVEETSKEISDAPVGTIECISDQMNGD
AQPTTEKSVNNGLRDSVDGKKQQTKAAAGEERKAAEASAIEKINLDKEKEEMASNTEVAM
ANETSLQKMVLAEKESTEDSEEVKKSALKEAKSPSPLMTKPLTSSKDATSPPEKHSDCKE
EQNVKVSKWDVKVCRTEHTTYTSIETDENPLSSKSQKPDETKGTDSSITSQEVKSAVSKE
TDKTVVNKDGYPLSVVKDMEKPPCTKGTEKWSNPKNPETSVITKQTGRPDPITEKPDHSK
CIKMPTVGKNTEKPPDKEGVEKCDVSKDIKTSVIKKTEISEKSKDAENLAISQETNTSSF
LKKADKPVSNKEAEKLESIKETDKSLVIKMTVKPEASKHTEKCDNPKDNKMSAVTKEKPA
VGTDVKAAAEVKKKAVLEEVFSASICKDEMRTVANATKTQSGPKDMEMADVSEKTTQSQL
GEPKKVEKSATPKDIGKSVTPKDAEKSTKLVTPKEGGKSATPKDTEKSAMPKDTVKYAKS
AALKDAEKLATSKDAEKSAKSATPTPTDAEKSAKSATPTPKDAEKSAKSATPTPKDAEKS
AKSATPTPKDAEKSAKSATPTPKDAEKSAKSATPTPKDAEKSAKSATPTPTDAEKYAKSA
TPTPKDAEKSAKSATPNPKDAEKSAKSATPTPKDAEKSAKSATPTPKDAEKSAKSATPTP
KDAEKSAKSATPTPKDAEKSAKSATPTPKDAEKSAKSATPTPKDAEKSAKSATPTPKDAE
KSAKSATPTPKDAEKSAKSATPTPKDAEKSGKSATPTPKVAEKSAKNTETTSKKIVLSSR
GQKPDTEETEKLADTKPVAEKGEKLVTFQDAKQLPSLKTSVPVEVKQEEPMEMRSEKSTH
DNIKIKGHAEKGWPKKAVKSGVKSETNPIKDPKPMNCDASSEKQAISKKASSLTEGETDK
SQDKVIKEDATTQGCPPKEDGSKPDYPKKNDKKEDDGTEKDDKNSTVEEKLGQAKASEGS
EEDDNKEDEDKGEKKDAGTTSEIQEEGIRLKIRGITHRRRAELQRKERDSGSDTGETGRS
LRRSPRICRPTAKGVEFQDRRMEKKEATPPVEKGDEEKTVQRKPREKVDQDGLYKSKGRR
RRKTRWSNTRTQRRKNNDSGEDDESESSEEESEEDNSDESFKVERGKRRKRNRERHSDDS
DTSSDDDLPPNDDPCKHCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPCQ
HKLLCDKLEEQLTNLDASLKKRERAERRKERLVYVGISVENIITPSLEVEEEREEEVVKK
EKKERTKSWGRRSTRAKKSISYRFDEFDEAIEEAIEEDIREADGGGAGRGKDMANITGHS
RGKDMSTILAAGEGGEGKENGCLPRPNASQRRKKRRRLNDLDSDSTMEEEESEDEFRLSD
STEEEEFVASDKSDAESEVAVDSNDDSDFGSTQRRTARTRRPAKRQRSAQTRQRRTPRRY
SDDEEETSEEEMVSEGSSEFSDSDLDCSRRRSRRSQTTKQVNYCESSGDSDGSKANTNRD
KVKPWRRLASSDSEASSSRGSDDRERTRLKRRDDSSEKESQQHRRRLSLKRRRASEEDDD
DHDSDESSEGERPVRKRVNRIDSDDSDKEEEKETKETREEEEGGVLGKGASPLDYGLVEL
HPPTNGQSPIKALEGLAHIGPQKPGATAVAIAPNGLELAPQDDDEDDLLGVTDLVDFVCN
SDML
NT seq
6315 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcggcagcatcggcgggttctacccccggtttttgcccaagctacgccgtg
atatgctcctttctagagcggtatggaaccttgcttgatttaccggagcttacatttcca
cagttggagcgatatctccaagacacaatctcagttccaaagatcttggtggaccttcat
gtgaagttgttgaggaagattggcaagtcagtgtccgcagacagatgggagaagtacctt
gtgaaggtgtgccatgagttcaacagtacttgggcatgggagcttgaaaataaaggatac
aaggacatgtctgtggagtacaagactggaatcctcaaacatttgtgtgaatgccagttt
gatgacaatgtaaagttcaagacagcaatcaatgaggaggatcctgataagatgcggctt
ctccccattggcaaggacaaagatggcctgatgtactggttccaacttgaccaggacaag
aatgtgagggtctatgtggaggagcaggacgacctggacgggtcttcctggaagtgcatt
gtcagagacagaaacagcttggctgagatcctggcactgctaaagactcaaatcgaccca
gcactgttgacaaagaaagaaggagaggaggaagatgaggcgaaaaataatactggggga
gaaggggaagttaaaaagacagaggatacctcagaggatgaagaggacaaaccctccaag
ggaacaacttccttagtctctccaaaaaccgagattacagaaaaagaggaatcacagcta
gacgaatcagatgccaaatcctcattgaatggcctcaaagatgagtcagagtcaaaaagc
caatcagaggagcctatggtggatgacaaggtcaccataaacacccgggccatcaaagaa
gagccaatggaggtgtcagaatccaaggagagcacagccacaaatgctacagagcctctt
gcagagaaaccttgtctgacgccacaaacagaacagacagatgaagccaagaggaagact
gcaaatgaactccaaagggccatgaagaatgaccagcaggccaaaatcccattgaaaaag
agagagatgaaactttgtgaaaattttgataataatagtggcggtggcagtagtatcttt
gtgcaaaacccatctgttgctcctgtcaaagaagctcctgaagttgaggagacaagtaaa
gagatctctgatgccccggtggggacgatagagtgtataagtgatcaaatgaatggtgat
gctcagcctacaacagaaaaaagcgtcaataatggtttaagagactctgttgatggcaaa
aaacagcaaacaaaagctgctgctggggaagaacgtaaagcagcagaagctagtgcaata
gagaaaataaacctggacaaggagaaagaggagatggcaagcaacactgaggtggccatg
gccaatgaaacaagtctacagaagatggttttagcagaaaaggaaagcactgaagattca
gaggaagtaaaaaaatctgccttaaaagaggctaaatctccgtcccctctaatgacaaag
ccattgacttcatctaaggatgcaacaagcccaccggagaagcactctgattgtaaagag
gaacaaaatgtcaaggtatccaagtgggatgtaaaagtgtgtcgtacagaacacacaacc
tatacatcaatagaaaccgatgaaaaccctttgtctagtaagtcacagaaaccagatgaa
actaaaggaacagattcatccattacctctcaagaggtcaagtcagctgtctctaaggaa
acagacaaaacagttgtcaataaggacggttatcccctttctgtcgtgaaagatatggaa
aaaccaccctgcacaaaaggtacagaaaagtggtcaaaccctaaaaacccagaaacctca
gtcattactaagcaaaccgggagacctgacccaattacagagaaaccagaccactctaaa
tgcataaagatgccaacagtcggaaaaaatacagagaaaccacccgacaaagagggtgta
gagaaatgtgatgtttctaaagatatcaaaacttctgtaattaaaaagacagagatttca
gaaaagagtaaagatgctgagaacctggccatctctcaagagaccaatacgtcctcattc
cttaaaaaggcagacaaaccagtttccaataaagaagcagagaaactggagagcattaaa
gagactgataaatcgttggtcattaaaatgacagtaaaaccagaggcatctaaacataca
gagaaatgtgataaccctaaagacaataaaatgtcagctgtcaccaaggagaaacctgct
gtaggcacagatgtaaaggctgccgctgaggtgaagaaaaaagctgtcctggaggaagtt
ttctcagcgtctatctgtaaagatgaaatgagaactgttgctaacgcgactaagacacaa
tctggaccaaaagacatggagatggcagacgtctctgagaaaacaacccaatcacaactg
ggtgaacccaaaaaggtagagaaatcggctacccctaaagatattgggaaatcggttacc
cctaaagatgcagagaaatctactaaattggttacccctaaagaaggtgggaaatcggct
accccaaaagacacagagaaatcagcaatgcctaaagatacagtgaaatatgctaaatcg
gcagcacttaaagacgcagagaaattggctacctctaaagatgcagagaagtctgctaaa
tcagctactcctacccctacagatgcagagaagtctgctaaatccgctacacctacccct
aaagatgcagagaagtctgctaaatcagctacacctacccctaaagatgcagagaagtct
gctaaatcagctacacctacccctaaagatgcagagaagtctgctaaatccgctacacct
acccctaaagatgcagagaagtctgctaaatccgctacacctacccctaaagatgcagag
aagtctgctaaatcagctactcctacccctacagatgcagagaagtatgctaaatccgct
acacctacccctaaagatgcagagaagtctgctaaatccgccacacctaaccctaaagat
gcagagaagtctgctaaatccgctacacctacccctaaagatgcagagaagtctgctaaa
tccgctacacctacccctaaagatgcagagaagtctgctaaatccgctacacctacccct
aaagatgcagagaagtctgctaaatccgctacacctacccctaaagatgcagagaagtct
gccaaatccgctacacctacccctaaagatgcagagaagtctgccaaatccgctacacct
acccctaaagatgcagagaagtctgctaaatccgctacacctacccctaaagatgcagag
aagtctgctaaatccgctacacctacccctaaagatgcagagaagtctgctaaatcagct
acacctacccctaaagatgcagagaagtctggtaaatcagctacacctacccctaaagtc
gctgagaaatcggctaaaaacacagagactacctctaaaaagattgttctatcttctagg
ggacagaaaccagacactgaagaaactgagaaactggcagacacaaagccagttgcagaa
aaaggagagaaacttgtcacctttcaggacgccaagcaattaccctctctcaaaacgtct
gtcccagtggaggtgaaacaggaggaacctatggaaatgcgttcggaaaagtcaacacat
gacaacataaagatcaagggacatgctgaaaaaggctggccaaaaaaggctgttaaaagt
ggagtgaagtctgagaccaaccctatcaaagacccaaagcccatgaactgtgatgcatca
tcagaaaaacaggctattagtaagaaggcatcatctctcactgagggtgagacggacaaa
agccaggacaaagtaatcaaggaagatgccacaacacagggatgccccccaaaagaggat
gggagtaagcctgattatcctaagaaaaatgacaaaaaggaggatgatggaactgagaaa
gatgacaaaaattcaacggtagaagagaaattgggtcaggcaaaagcaagtgaggggtct
gaggaagatgataacaaagaggatgaggacaagggtgaaaaaaaggatgcgggaacaaca
tcagagatccaagaggagggaattcgcctgaaaatacgcgggattacccaccggaggaga
gctgagctccagagaaaggagagggactctgggtcagatactggtgagactgggagatcc
ctgaggaggtcacccaggatctgcaggccgaccgctaagggggtggagttccaggacagg
aggatggagaagaaagaggccacaccccctgtagagaagggtgatgaggagaaaactgtt
cagaggaaaccgagagagaaggttgatcaagatggactgtacaaatccaaggggcgacgg
aggagaaagacccggtggtccaacactcgaacacaaaggcgcaaaaataatgattctggt
gaagacgatgaaagtgagtcgagcgaagaggagagcgaggaggacaacagtgatgagagc
tttaaggtggagaggggcaagaggaggaagaggaacagagagaggcacagcgacgactct
gacacctcctcggatgatgacctcccccctaacgatgacccctgcaaacactgcggcctc
cccaaccatcctgagctgattttgctgtgtgactcgtgcgatagcggctaccacacagct
tgcctcagaccccctctcatgatcatcccagatggggagtggttctgcccaccctgccaa
cataagctgctctgtgacaagcttgaggagcagcttactaatctcgacgcttccctgaaa
aagagggagcgcgctgagcgacgaaaagagcggttggtctatgttggaatcagtgttgaa
aacatcatcactccctcgttggaggtagaggaagaaagggaggaagaggtggtgaagaag
gagaagaaagagcgaaccaagagctggggtcgaaggtccacaagggcaaagaaaagcata
agctacaggtttgatgaatttgatgaggctattgaggaggcaattgaagaagacatcaga
gaggctgatggtggaggagctggtcgaggcaaggacatggccaacatcacaggccatagc
agagggaaggacatgtccactatcctggcagcaggagagggtggcgagggcaaggagaat
gggtgcctgccgcggcccaacgccagccagcgcaggaagaagcgccggcgtctcaacgac
ctggacagcgacagcactatggaggaggaagagagcgaggacgagttccgtctcagtgac
agtacggaggaagaggagtttgtggcgtcggacaagagcgatgcagagagcgaagtggca
gtcgactccaatgacgacagcgacttcggcagcacacaacgcagaaccgccaggacaagg
aggccagccaaacgtcagaggagtgctcagacgcgacagcgccgcacaccacgaaggtac
tcagacgatgaagaggaaacgagtgaggaagaaatggtgtcggagggctccagcgagttc
agcgatagcgacctggactgtagccgacgccgatcccgccggagtcagacgacgaagcag
gtcaactactgcgagtcgtccggagactctgacggctccaaggccaacacaaaccgtgac
aaagtcaaaccgtggcggcgcctcgccagttcagacagcgaagcgagctcctccagaggc
tcagacgacagggagaggactaggttaaagaggagggacgactcgtctgaaaaagagtcc
cagcagcaccgcagacgactttcgctgaaacggcggcgagcctctgaggaggacgatgac
gaccacgattccgatgaatcatcggagggagaacgtcctgtccgcaagcgtgtgaaccgc
attgactcggacgactctgacaaggaggaggagaaggagacgaaagaaaccagggaagag
gaggaagggggagtgctggggaagggagccagcccgttggactacggcctggtggagctg
catccccccaccaacggacagagtcccatcaaggccctagagggcctggctcacattggg
ccccaaaaacctggggccacagctgtcgccatagcgcccaatggactggagttggcacca
caggatgatgatgaggatgacctgcttggggtcacagacctggtggactttgtctgcaac
agtgatatgttgtaa
DBGET
integrated database retrieval system
