Oncorhynchus mykiss (rainbow trout): 110533497
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Entry
110533497 CDS
T07259
Name
(RefSeq) serine/arginine-rich splicing factor 7 isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110533497
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110533497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110533497
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
SR proteins
110533497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
110533497
NCBI-ProteinID:
XP_036845783
Ensembl:
ENSOMYG00000008873
UniProt:
A0A8C7P6F4
LinkDB
All DBs
Position
10:21183982..21210302
Genome browser
AA seq
254 aa
AA seq
DB search
MSYSSSRSSSRNTDCKVYVGDLGNGAAKGELERAFSYYGPLRSVWVARNPPGFAFVEYED
PRDAEDATKGMDGKVLCGARIRVELSTGMSRKSRHDRPSRRHFDPNDRCYQCGENGHYAY
DCYRFSKRGGGRRSRSRSRSRSRGRRYRSRSRSNGRDRRSGSPARSKSRSPVRRSSRSPV
RRSSRSPVRRSSRSPVRRAASRSRSRSRSRSVSRPRARSVSRSRSRSKSRSATTKRDSRS
RSPSQRKSPTPDAD
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtcctactcgtcatcacgaagctcctcgcgcaacactgactgcaaggtgtatgtaggt
gatctaggcaacggtgctgccaagggggagttggaacgggcgttcagctactatggacct
ttgcgcagtgtctgggtggccaggaacccacctggttttgcctttgtcgagtacgaagat
cccagagatgctgaggatgcgacaaagggcatggatggcaaagtgctctgtggtgcccgc
ataagagtggagttgtcaacgggtatgtctcgcaagtcacgccacgaccgccccagccgc
cggcatttcgaccccaacgaccgctgctaccaatgtggcgagaatggccattatgcatat
gactgctatcgctttagcaagaggggtggtggccgccgcagcaggtcccgctcacggtca
aggtccaggggaaggcgttaccgctcacgcagccgaagcaacggccgcgaccgtagatct
gggtccccagcacgttccaagtccagaagtccagtgcgcaggtcgtccagaagtccagtg
cgcaggtcgtccagaagtccagtgcgcaggtcgtccagaagtccagtgcgcagagcagca
agtcgctcccgatctcgctcccgctcccggtccgtgtcccgccccagggctcgcagcgtc
tccagatctcgctcccggtccaagtcccgctcagccaccaccaagagggacagtcgatcc
aggtctccgagccagaggaaaagccccactcctgatgctgactga
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