Oncorhynchus mykiss (rainbow trout): 110533503
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Entry
110533503 CDS
T07259
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110533503
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110533503
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GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
110533503
NCBI-ProteinID:
XP_021473445
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Position
10:21444502..21488968
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AA seq
880 aa
AA seq
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MKGGGRGKEPPVEVSCKRPKRKCLQWHPLLSKKALDFSEEEEEDEEELEKEPLLVRETRG
PKVPCTPEGEEDSSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLE
PKEKQKYTDMAKEYKDAFMKANPGYKWCPATNKPVKSPCHTVSNTRNKVWSFPSNSPKGC
ATAKKLPKTDSTPQLNFAMADPTKMGGLSMLLLAGEHALTAREISSSSSQSGATDVTKYP
DKSSLFQLAEISSSTRQPSLMDTAGKGKPLSWEDQAEMWSGTSQQGKPDVPTANVKSPLF
QLAEQISSDSSQSTAPEGKQCGQSALFQLAEMCLASEAGKMETQDDTCTPHIKTETVVEE
AGDNTPDLPLSFPPSSSMPTDASLLLLRGQAAIIKRKKDGSTREAPKVVDKDKSPGPGSP
KKTLKKRPSSESELESLFYTIEAVAKGAWGDAEEDMPKKKARTAAVTILVESSSPKKRAK
PKAKRPLKAKEDERNVKDKEDDGRTELPLTVETVVNPASPKIEAKEANISSSTEEPTSPP
SPPQIKHKVGERELEANAEGCGSRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRGSFR
SASDEGGWIDETWAFSQMGPSNFKKLKKSKSKDETAPGLGKLEEEFEKKFNSLPQYSPLT
FDKKSTVVTKKKTDISTAPEEQPPKPAKGQSPSQKNTLFHKIVSNYKEKKKKPNTLDKDI
AMRSDSPMLDSAAKATKAKPSPAPCATAMLNPEAMGTSPSVPVGSQKRKARKSKITHLVR
SADGRVSPAEEDKARDLTPEQDDKPLSQDTLCNETGCYNASKQEEADRSSAPEDLPAFFS
LAALAEVAAMENIHRGQHVIGDSQKKDMAKTPLLISCADQ
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtggaggaaggggtaaggagcctccggtggaggtgagctgcaagcggcccaag
cgcaagtgtctacaatggcacccgctactctccaagaaggccctggacttttcggaggag
gaagaggaggacgaagaagaactagagaaggagccattgttggttagggagacccggggg
ccgaaggtgccatgcaccccggagggggaagaggactcttcagagcagcgggcccgccgg
cccatgaatgccttcctgcttttctgcaagcgccaccgatcgctggtgaggcaggaacac
cctcgactggacaaccgcggtgccaccaagatcttggctgattggtgggctgtgctggag
cccaaagagaaacagaagtacactgacatggccaaggagtacaaggatgccttcatgaag
gctaacccgggctacaagtggtgccctgccaccaacaagccagtcaagagcccctgccac
actgtcagcaacacccgcaataaagtgtggtccttcccttccaactcccctaagggctgt
gccactgccaagaaactgcccaagactgacagcacaccacagcttaatttcgccatggca
gatcccacaaagatgggtggcctaagtatgctactgttggctggggagcatgcccttact
gccagagagatttcctccagctcatcacaatctggagccacagatgtcactaagtaccct
gataaatcctccctattccaacttgctgagatctcttccagcacgcgtcagccgagttta
atggacacagctggcaaagggaagcccttgagttgggaggaccaggctgaaatgtggtct
ggaacctcacagcagggaaagcctgacgtacccactgccaatgtcaagtcccctcttttt
caactggcagagcagatctcctctgattcgagccagtcgactgcaccagagggaaagcag
tgtggccagtccgctctcttccagcttgctgagatgtgcttggcctccgaggcagggaag
atggagacacaggacgatacctgcaccccacacatcaaaactgagactgtggtagaggag
gctggggacaacacccctgatcttcctctctcctttcccccgtcttcctccatgccgacc
gatgctagtctcctgctgctcagaggccaagcagccataatcaaaaggaagaaagacggc
agcaccagagaggcgcccaaagtggtggacaaagacaagagccctggtcccggctcaccc
aaaaagaccctcaagaagcgaccttcatccgagtcagagttggagagcctcttctacact
atcgaagccgtggctaaaggggcatggggcgatgccgaggaggatatgcccaagaagaag
gctcgcactgccgccgttaccattctggtagagtccagctcacccaaaaagagggccaag
cccaaagccaagaggcccctgaaggctaaggaagatgagagaaatgtgaaggacaaagag
gacgacggacgcacagagcttccattgacagtggagacagtggtgaatccagcaagcccc
aagatagaggctaaggaggccaatattagcagcagcacggaggagcccacctcccctccc
agccccccgcagattaagcacaaagtcggggagagggaactggaggccaacgcagagggg
tgtggctccagaaagtctgagagaagctgcaagggggcgctgtacaagaccctggtgtcg
gaagggatgctgacctcactgagggccaacgtggacagaggcaaaagaggttcttttcga
agtgcatctgatgaaggaggctggattgacgagacctgggctttctcacagatgggaccc
agtaatttcaagaagcttaagaagtccaaatccaaagacgagaccgcgccaggtttgggg
aaactagaggaggagtttgagaagaagttcaacagcctgccgcagtacagccctctgaca
ttcgacaaaaagagcaccgtcgtcaccaagaagaaaactgacattagcaccgcaccggag
gaacaacctccgaaacctgccaagggtcaatctccatctcagaaaaatactttattccac
aagattgttagcaattacaaggagaaaaagaagaagcccaatactttggataaagacata
gcgatgcgtagtgactcccccatgttagactcggctgccaaggccaccaaggcaaagccg
agcccagccccctgtgccactgccatgctaaacccagaagccatgggaactagccctagt
gtgccagtgggcagccagaaaaggaaggccaggaagagcaagatcacccacttggtgcgc
tcggccgacggcagggtatccccagccgaagaggacaaagccagggacctgaccccggag
caggatgacaagccattatcccaagatactttatgcaatgaaacagggtgttacaacgca
tccaagcaagaggaagcggacaggagcagtgcacctgaagacctgcctgccttctttagc
ctggctgcccttgcagaggtggcagccatggagaacattcacagaggccagcatgtgatt
ggtgacagccagaagaaagacatggccaagacccctttgctcatctcctgcgctgaccaa
tga
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