Oncorhynchus mykiss (rainbow trout): 110533627
Help
Entry
110533627 CDS
T07259
Name
(RefSeq) polyubiquitin-B isoform X1
KO
K08770
ubiquitin C
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03320
PPAR signaling pathway
omy04120
Ubiquitin mediated proteolysis
omy04137
Mitophagy - animal
omy04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110533627
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110533627
04137 Mitophagy - animal
110533627
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
110533627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110533627
Ubiquitin system [BR:
omy04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
110533627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
110533627
NCBI-ProteinID:
XP_021473704
LinkDB
All DBs
Position
10:complement(30048123..30049947)
Genome browser
AA seq
305 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagaccctcacaggcaagaccatcacccttgaggtggagcccagt
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagcgtctgatcttcgctggcaagcagctggaagatggccgcaccctctctgactacaac
atccagaaagagtccaccctccaccttgtgctgcgtctcaggggaggcatgcagatcttc
gtcaagaccctcactggtaaaaccatcacactagaagtggagcccagtgacaccattgag
aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagcgtctgatc
ttcgctggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaagag
tccaccctccaccttgtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccctc
actggtaaaaccatcacactagaagtggagcccagtgacaccattgagaatgtgaaggcc
aagatccaggacaaggagggcatccccccagaccagcagcgtctgatcttcgctggcaag
cagctggaagatggccgcaccctctccgactacaacatccagaaagagtccaccctccac
cttgtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccctcactggtaaaacc
atcacactagaagtggagcccagtgacaccattgagaatgtgaaggccaagatccaggac
aaggagggcatccccccagaccagcagcgtctgatcttcgctggcaagcagctggaagat
ggccgcaccctctccgactacaacatccagaaagagtccaccctccaccttgtgctgcgt
ctcaggggaggacagtaa
DBGET
integrated database retrieval system