KEGG   Oncorhynchus mykiss (rainbow trout): 110533627
Entry
110533627         CDS       T07259                                 
Name
(RefSeq) polyubiquitin-B isoform X1
  KO
K08770  ubiquitin C
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03320  PPAR signaling pathway
omy04120  Ubiquitin mediated proteolysis
omy04137  Mitophagy - animal
omy04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110533627
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    110533627
   04137 Mitophagy - animal
    110533627
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    110533627
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omy04121]
    110533627
Ubiquitin system [BR:omy04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   110533627
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Ubiquitin_5 Dsc3_N OTU1_UBXL
Other DBs
NCBI-GeneID: 110533627
NCBI-ProteinID: XP_021473704
LinkDB
Position
10:complement(30048123..30049947)
AA seq 305 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGQ
NT seq 918 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctcacaggcaagaccatcacccttgaggtggagcccagt
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagcgtctgatcttcgctggcaagcagctggaagatggccgcaccctctctgactacaac
atccagaaagagtccaccctccaccttgtgctgcgtctcaggggaggcatgcagatcttc
gtcaagaccctcactggtaaaaccatcacactagaagtggagcccagtgacaccattgag
aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagcgtctgatc
ttcgctggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaagag
tccaccctccaccttgtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccctc
actggtaaaaccatcacactagaagtggagcccagtgacaccattgagaatgtgaaggcc
aagatccaggacaaggagggcatccccccagaccagcagcgtctgatcttcgctggcaag
cagctggaagatggccgcaccctctccgactacaacatccagaaagagtccaccctccac
cttgtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccctcactggtaaaacc
atcacactagaagtggagcccagtgacaccattgagaatgtgaaggccaagatccaggac
aaggagggcatccccccagaccagcagcgtctgatcttcgctggcaagcagctggaagat
ggccgcaccctctccgactacaacatccagaaagagtccaccctccaccttgtgctgcgt
ctcaggggaggacagtaa

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