KEGG   Oncorhynchus mykiss (rainbow trout): 110533738
Entry
110533738         CDS       T07259                                 
Symbol
zgc:110224
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    110533738 (zgc:110224)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:omy03400]
    110533738 (zgc:110224)
DNA repair and recombination proteins [BR:omy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     110533738 (zgc:110224)
SSDB
Motif
Pfam: XRCC1_N zf-C2HC_2
Other DBs
NCBI-GeneID: 110533738
NCBI-ProteinID: XP_021473902
Ensembl: ENSOMYG00000042015
LinkDB
Position
10:35517285..35521595
AA seq 450 aa
MAPVKIKHVVSFTSQDPKNCVENLCVVGGDSRSWLCNPQDRSGVLRAELQLERASYFGYI
DVGNCGSAFIQIDVGRSSWPLDQPYITLLPTATLMSPAESRQGTGLTGVRMFKKGDFLSE
GAEDSWDRVRVTCTQPFNKRSQFGLSFLRIRSPLEESEEGSTQTCKENQGQTTPDKSASG
VREWLSSPAVQRTFFGGAKGEGVVLSRTARMVLTASQAARRSLPLPSTSLSPSHTSSSGT
QNTAISSPPTAKPDATTHIPNQGKPGAHTHNKGKPVGNMGNIHPHTASMACLSTVRSSKE
NTSQRQLKRKPNSKSRQNQLNSTTSSKHGKPAVCKRPIATLQHTATAPHPHSSPEPQDTG
DLETTCPICGVFFTAEYLPLHAASCQQVETRKLPGGIVTPVPHPFPLSLASLEESMVPCP
LCSFTFPLSLIQMHASTCGDPVDPHVIWVD
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggccccagtgaaaattaaacacgtcgtttcattcacgtcacaggaccccaagaactgt
gtggagaacctatgtgttgtgggtggagacagcaggtcgtggctgtgcaacccccaagac
cgaagtggagtcctccgagcagaactgcagctggagcgagcctcatactttggatacatc
gatgtggggaactgtggatctgcgttcattcagattgatgtcggccggtcctcttggccc
ctggaccagccctatatcaccctgttgccaacagcaacactgatgagtccagcagaatcg
cgacaaggcactgggcttacaggagtgagaatgttcaagaaaggtgatttcctgtcagaa
ggtgcagaggacagctgggaccgggtgagagtaacctgcacccagccttttaacaagcgc
tctcagtttggcctgtccttcctgcgcatccgcagccccctggaggagagcgaggagggc
tccacacagacttgcaaagagaaccagggtcagacaaccccagacaaatcagcatcaggc
gtgagagaatggctgtcgagccctgctgtgcagagaaccttctttgggggagcgaaaggg
gagggtgtggttctgagccggacagctcgtatggtcctcacagcgtcccaggctgccagg
cgttcccttccccttccttccacttccttgtctcccagtcacacatcatcctctggcact
cagaatacagcaatctcttcccctcccacagccaagccagatgcaactactcatatcccc
aaccagggaaagccaggggctcatacacacaacaaaggcaagccagttggaaatatggga
aatatacaccctcacacagcttcaatggcttgtttaagcacagttcgcagctccaaggaa
aatacttctcaaagacagctgaagagaaaaccgaactccaaaagcaggcagaaccagctg
aatagcaccacctctagtaagcatggaaaacctgcagtctgtaagaggccaatagctact
ctacaacacactgccacagcccctcatcctcactcatctccagagcctcaggacactggt
gaccttgagaccacatgcccaatatgcggagtgttctttactgcagagtacctgccgctc
cacgctgcctcctgccagcaggtggagaccaggaagctccctggggggattgtgacccct
gttccacaccccttccctctctctctcgccagcctagaggagtccatggtgccctgccct
ctctgctccttcacgttccctctgtccctcatccagatgcacgccagcacctgtggagac
cccgtggacccccatgttatctgggtggactag

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