KEGG   Oncorhynchus mykiss (rainbow trout): 110533830
Entry
110533830         CDS       T07259                                 
Name
(RefSeq) probable ribonuclease ZC3H12B
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110533830
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     110533830
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 KH_N4BP1_1st Regnase_1_C zf-CCCH_2 zf-CCCH_4
Other DBs
NCBI-GeneID: 110533830
NCBI-ProteinID: XP_021474045
Ensembl: ENSOMYG00000010201
LinkDB
Position
10:37973339..37992659
AA seq 971 aa
MVLELAVPANAGPLLHRSIPHIERIFRVRVSYGSAESSCDSANVSTSNIIIVRVAEGKED
DCTKAKDYIVSLTSPAHRKREHLTLAQHKQLVVLKPVIEYDSQAVVEVREHVVYISGGER
NVMTAWSMVEKIKMEKHPCREEASELTEAQQPSGESEEGNSSESESEHQLQVNSGSCKRT
ELFSATKPHRQLCRSPCLDRPSFSQSSTLPELRPDDTKAATVLKQASDKVYQTKMEFALK
LGYSGEQVETVLNKLGAAALINDILAELVRLGNKGELEVQASSNTGMLVSRGGPCVKEAV
SPEVSLEDDSVDPYDNLRPIVIDGSNVAMSHGNKEVFSCLGIQLAVDWFVEKGHKDITVF
VPAWRKEQSRPDAPITDQDILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLACDSDG
IIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVV
PEHKKQPCPYGKKCTYGHKCKYYHPERANQPQRSVADELRAFAKLSAVKTMSEGALAKCG
TGLATAKGESGSEAKRVTPKRQSDPSIRSVACEPEERLSAVRKPEANSVPSLVSALSVPT
MQPAKSHAAGALNTRSASSPVPGSLQFTHSSLEHMSSVQYPHPPILVTNSHGASVTYSEQ
FPKYDSVSTDHGYYSMLSDFSNMSMSSMHNVDSFCSMEHEHGVYLRNPSQHCPEPCLSHS
NSDSFSSYGELYMSSVDSSLDESMKGQQSPAQSRLQASSHGGFHHEALTRVQSYGHEEPK
QGPCRKQSISHLAPHVQHPVVGARSSCPGDYPLPQNVLPSQSSQPGRSLGMTRMDSISDS
RLYESNPMRQRRPPLCREQHASWDPLPCGSESYGYHSYPLSNSLMQPCCERVMVRSMPDK
MEQIWRSPWENPPQAEHQERHVIPEHLYQTYRNLCNIFPSFVVHSVMEKNPHLTDPQQLA
AVIVTKLRSCH
NT seq 2916 nt   +upstreamnt  +downstreamnt
atggttttggagctggcagtgcccgcaaatgcaggccctttgcttcaccgctccatcccg
cacattgagcgtattttccgggtgagggtcagctacggatccgcggagtcaagctgcgac
agcgcaaatgtcagcaccagcaatatcataatagtacgtgtcgcggagggaaaggaagat
gactgcaccaaggcaaaagattacatcgtttccttaacttcgccagctcaccgaaagaga
gagcatctaacgttggctcaacacaaacagcttgttgtgctgaagccagtcatcgagtat
gactctcaggctgtggtggaggtgagggagcatgtggtgtacatctccggtggcgagagg
aacgtgatgacggcatggtcgatggtggagaagatcaaaatggagaaacacccttgcagg
gaagaggcctctgagctgactgaggcccagcagcccagtggggagtcggaggaggggaac
agctcagagagtgagtcagagcatcagctgcaagtgaacagcggcagctgtaagaggacg
gagctcttcagtgccaccaagcctcaccgtcagctctgtcgctctccatgcctggaccgg
cctagcttctcccagagcagtactctaccagagctccgccccgacgacaccaaggccgcc
acagtcctcaaacaggccagtgacaaggtgtaccaaaccaagatggagtttgccttgaag
ctgggatactcaggtgaacaggtggagacagtgctgaacaagttaggggctgctgccctc
atcaatgatattctggctgagcttgtgaggcttggtaataaaggtgaactggaagttcaa
gccagcagtaacacaggcatgttggtctcccgtggaggcccctgtgtcaaagaggctgtc
agtccggaggtgtcacttgaagatgattccgtggatccttatgataatctcaggcctatt
gtcattgatggatcgaatgtggcaatgagccatggaaacaaagaggttttctcttgcctt
ggtatccaattggctgttgattggtttgtggagaaagggcacaaagatatcacagtgttt
gttcctgcctggaggaaagagcagtcgagacctgacgcccccattacagaccaagacatt
ttgcggaagctggagaaagaaaagatcctagtgttcaccccatctagaagagtccaaggg
aggagagtggtgtgctatgatgatcgctttatagtgaaactggcttgtgactctgatggc
ataattgtgtcaaatgacaactacagggacttacagaatgagaagccggagtggaagaag
ttcatagaggagcggctgctgatgtactcgtttgtcaatgataaattcatgccacctgat
gaccctttgggaagacacggtccaagtttagagaattttctccgcaagcgtcctgttgtt
ccagagcacaaaaagcaaccctgtccatatgggaaaaaatgcacttatggacataagtgc
aagtactaccatccagagcgtgcaaaccagccccaacggtcagtggctgatgaactgagg
gcatttgccaagttgtctgctgtgaagacaatgagcgagggggccctggccaagtgtggc
actggactcgccacagctaagggggagagtggctctgaggctaaacgagtgaccccaaag
cgccagtccgaccccagcatccgctcagtcgcctgcgagccagaggagagactgtccgct
gtccgtaagcctgaggcaaattctgtgccttcccttgtgtctgccctcagcgtgcccacc
atgcagcctgcaaagagccatgcggctggtgccttgaacacacgatcagccagcagccca
gtacccggctccctccagttcacccacagctctctggagcacatgtctagtgtacagtac
ccacatccacccatcctagtcaccaacagccatggcgcttctgtcacttacagtgaacag
tttcctaagtatgattctgtgagcacggaccacggatactactctatgcttagtgatttt
tctaacatgagcatgagcagcatgcacaacgtggacagcttctgtagcatggagcatgag
cacggggtttatctgagaaatcccagccagcattgccctgagccctgcctcagccactct
aacagtgactccttttcctcttatggggaattatacatgagctcagtggacagtagcctg
gatgagagcatgaagggacagcagtctccagcacagagcagactccaggcctcctcccat
ggggggttccaccacgaggccctgacccgggtgcagagctatggccatgaggagcccaag
caaggtccatgcaggaagcagtccatatcccacctggcaccgcatgtccagcaccctgtt
gttggggcccggtccagctgcccaggggactaccccttacctcagaatgtcctcccgtca
cagtcctcgcagccgggacgctccctgggcatgacacgtatggacagcatctcagactcc
aggctgtacgagagtaaccccatgaggcagcgcagacccccactgtgccgcgagcagcat
gccagctgggacccgctgccctgcggcagtgagtcctatggataccattcgtaccccctg
agtaacagcctgatgcagccgtgttgtgagcgggtgatggtccgcagcatgcctgacaag
atggagcagatttggaggtctccgtgggagaacccgcctcaagccgagcaccaggagcgc
catgtcatcccagagcacctgtaccaaacataccgcaacctctgcaacatcttcccatct
ttcgtggtgcactctgtcatggagaaaaaccctcatctgacggacccacaacaactcgct
gccgtcattgtcacgaagctgaggtcttgccattga

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