Oncorhynchus mykiss (rainbow trout): 110533854
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Entry
110533854 CDS
T07259
Name
(RefSeq) TBC1 domain family member 8B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110533854
Membrane trafficking [BR:
omy04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110533854
Endosome - Golgi transport
Rab GTPases and associated proteins
110533854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
AF0941-like
Motif
Other DBs
NCBI-GeneID:
110533854
NCBI-ProteinID:
XP_021474076
Ensembl:
ENSOMYG00000016199
LinkDB
All DBs
Position
10:complement(38952608..38972062)
Genome browser
AA seq
1137 aa
AA seq
DB search
MWLKPEEILLKNAFKLWVTEKGNDYFVLQRRRGYGEGGGGLTGLLVGTLDTMLDSTSKVA
PFRILHQTPDSQVYWSIACGGTKEEISQHWEWLEKNIMRTLSVFDSSDDITSFVQGKIRG
LIAEEGKVSCVQEDDPEKFREALLRFEKWFDLPQKEKLVTYYSCSYWRGRVPCQGWLYLS
TNFLSFYSYLLGSEVKLVISWNEIWRLEKTSNVILTESIHVLANGEDHFFSMFLHLNETF
LIMEQLADYSIKRLFDKETFQEEPSLSDPLQITKRGLETHARNEQFRAFFRLPKEENLLE
VYESFLWVPFSHFNTLGKICLSESYLCFASQDGSQCHVIIPMREVIGVEKPDRSSRALIV
CVRGKRALRFSEVRDFERLANAIRRRCGMTASPQHSASTEVIRGECQNLINHFEDNPEEV
ALMVGQKDSSKAVSTEALMTVFHPQDTENLDPKMLKEKMKEQSWNIHFSEYGRGTSMFCT
KKTRDLIVRGIPEALRGELWMLFSGAVNDMATNPGYYSELVDQSLGTSTLATDEIERDLH
RSLPEHPAFQSDTGISALRRVLTAYAYRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVA
VCERMLPDYFNRRIIGALVDQAVFEELIRMHLTQLTEHMTDLTFFSSVSLSWFLTLFISV
LPIESAVNVVDCFFYDGIKAILQLGLAVLDYNMEGLISSHDDAEAVTILNKFFDNVTNKD
SPLPQTVQQNSVGNNDKASSISKVDVSDLIKEAYEKYGDMKSEEVESMRKRNKLYVIQTL
EDTTKQNVLRVVSQEVKFSASQLDELYILFKRQHFLSCYWTMNSPVLLHHDPSLAYLEQY
QLGFHQFSLLFSLLEPWSLCSGKDTLFLWAFRLLDENQDGLVNFKEFCCALDILYSGTFT
SKLTFLFKLHQPPAFTGSPFQSKAQRLPHFIPMTDDISHLSRLTVSDLPEDGVIRKSPER
GRGKVDLQAYLKQWQDEILKKEESIKDLPRINQAQFIQFSKTLYNLFHSDPEEESLYRAV
ARVTSLLLRMEEVGRRLQEPTSPQKSSTSPIQAALEGALPDGEASSTPESSSDTPSTPIT
QEAGSIPQEVEWSFAFEQILASLLNEPVLVRFFERPVDIQARLDHAKCAQLKAKTNE
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttaaacctgaagagatattgctgaaaaatgcattcaagttatgggtgacggaa
aaaggcaacgattatttcgtattacaaaggaggcgaggatatggagaaggaggaggcggt
ttgacaggtctcctggttggaactctggatacgatgctggactctacgtctaaagttgca
ccgtttcgcattctacaccagacaccggactcccaggtctactggtcaatagcgtgtggt
ggcaccaaggaggagatcagccaacactgggagtggctggagaagaacatcatgagaacc
ctgtctgtgtttgactccagcgatgacatcaccagctttgtgcagggcaagatcagaggt
ctgattgctgaggaaggaaaggtgtcatgcgtgcaggaggatgaccctgagaagttccgt
gaggcgctgctaaggtttgagaaatggtttgatctccctcagaaggagaagctggtcacc
tactactcctgcagctactggaggggtcgcgtgccctgccagggctggctctacctcagc
accaacttcctgtccttctactcctacctgctgggctccgaggtgaagctggttatctcc
tggaatgagatctggaggctggagaaaacgtccaatgtcatcctgacggagagcatccat
gtgttggccaatggggaggaccacttcttctccatgttccttcatctcaatgagacattc
ctgatcatggagcagctggctgactactccatcaaacgcctgtttgataaggagactttc
caggaagagccctccctctcagaccctctgcagatcaccaagagaggcttagaaacgcat
gctaggaacgagcagttccgggccttcttcaggctgcctaaagaggagaacctgctggag
gtgtatgagagcttcctgtgggtgcccttcagccacttcaacacgctagggaagatatgt
ctttccgagagctacctgtgtttcgcgagccaggatggcagccagtgccacgtcatcatc
cccatgagagaggtgattggtgtggagaagccggaccgtagcagcagggctttgattgtt
tgtgtgcggggtaagagggctctacggttctctgaagtccgagactttgagcgcctcgcc
aatgcaatccgcaggaggtgtgggatgacggccagtcctcagcactctgcatcgactgag
gtcatcagaggggagtgccaaaacctcatcaatcactttgaggacaacccagaggaggtg
gctttgatggtgggacagaaggacagcagcaaggctgtcagcactgaggccctcatgacc
gtgttccatccccaggacaccgaaaatctggaccccaaaatgctgaaggagaagatgaag
gagcagtcatggaacatccacttctcagaatatggccgtggcaccagtatgttctgtacc
aagaagacacgagacctgattgtgcgtggcatccctgaggccttaaggggagagctctgg
atgcttttctcaggtgcagtcaacgacatggccactaacccagggtactacagtgagctg
gtggatcagtctctggggaccagcaccctggccactgacgaaatagagagagacctgcac
cgctccctaccagagcaccctgccttccagagcgacacaggcatctctgccctgcgcaga
gtcctcaccgcatacgcctacaggaaccccaaaatcggctattgccaggccatgaacatc
ctgacgtcagtccttttgctctatgcaaaagaggaggaggctttctggctgctggtggcc
gtctgtgagaggatgctgcctgactactttaaccgcaggatcatcggtgcactggtggac
caggcggtgtttgaggaactgatccgaatgcacctcacccagctgacggaacacatgaca
gacctgaccttcttctcctctgtgtccctgtcctggttcctcaccctgtttatcagcgtc
ctgccaatagagagcgcggtcaacgtggtcgactgcttcttctacgacggcatcaaagcc
atcctgcagctgggcctggctgtgctcgactacaacatggagggcctgatcagctcccat
gacgacgctgaggcggtcaccatcctcaacaagttttttgataatgtgaccaataaggac
agtcctcttccacaaacagtgcagcaaaactctgtagggaacaatgacaaagcatcatcc
atctccaaggtggatgtcagtgatctcatcaaagaagcctatgagaaatatggagacatg
aaatcagaggaagtagagagcatgcggaaaagaaacaaactatatgttatccaaacgtta
gaggatacaaccaagcaaaatgtgctgcgggtagtgtcacaagaagtaaagttcagtgct
tcccagcttgatgaactttatatattgttcaagaggcaacatttcctcagctgctactgg
acaatgaacagcccagtgctgctgcaccacgaccccagcctggcctatctggagcagtac
cagctgggcttccatcagttcagcctgctcttctccctcctggagccctggtccctctgc
agtggcaaggacacactcttcctctgggccttccgcctgctggatgagaaccaggatggc
ctcgtcaacttcaaagagttctgctgtgccttggatattttgtacagcggcactttcacc
agcaaactgacattcctgttcaagcttcatcagccaccagctttcacaggtagtcctttc
caatcaaaggcccaaagactgcctcactttattccaatgactgacgacatatcccacttg
agtcgattgactgtgtctgaccttccagaagatggcgtgatcagaaaaagccctgaaaga
ggcagagggaaagttgatctgcaagcctacctgaaacaatggcaagatgagatactaaag
aaagaggagagcattaaggatttacccagaataaaccaggctcagtttatccagttttcc
aaaacactctacaacctgttccatagtgacccagaggaagagtctctgtaccgtgctgtg
gctcgagtcaccagtcttctgctgagaatggaagaagtagggcgcaggctccaggagccc
accagtccccagaagtccagcactagccccatccaggctgccctagagggggctctacct
gacggagaggcttccagcacccctgagagcagctctgacacccctagcactcccatcact
caggaggcaggctccatcccacaggaggtcgagtggtcattcgcttttgagcagatcctg
gcatccctgctcaacgagcctgtccttgtgcgcttctttgagaggcctgtagacattcaa
gcccggctggaccatgccaagtgtgctcagttgaaagccaagacaaacgagtga
DBGET
integrated database retrieval system
