Oncorhynchus mykiss (rainbow trout): 110533880
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Entry
110533880 CDS
T07259
Name
(RefSeq) LIM/homeobox protein Lhx1-like isoform X1
KO
K09372
LIM homeobox protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110533880
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
110533880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
110533880
NCBI-ProteinID:
XP_021474128
Ensembl:
ENSOMYG00000034433
LinkDB
All DBs
Position
10:40470019..40475795
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AA seq
402 aa
AA seq
DB search
MVHCAGCERPILDRFLLNVLDRPWHIKCVQCCDCKCNLTEKCFSREGRLYCKNDFFRRFG
TKCGGCAQGISPNDLVRRAKSKVFHLNCFTCMMCNKQLSTGEEMYILDEFKFVCKEDYLS
NSNGKDTTLLSVTTCSDPSLSPDSQDPQDDSKDSEIGHLSDKEVGSNENDEQNVGGKRRG
PRTTIKAKQLEVLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLS
VLGARRHAFFRGPRRMRTLVDRLEPGELIPNGHFSYYGDYQSEYYGPGGNFEYYTQGPPS
SQAQTPGDLGFSSGPAGTPLGGMDHHLAGHHPSSEVQCFNDIISHHPADSPSPEPNGPGS
MHSISSEMCGPSTPFTSLSLNGSGYSNQLSHPSSEMSEGTVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggttcactgtgccggctgcgaaagacctattctggacaggtttctactcaatgttctg
gacagaccatggcacatcaagtgcgtgcagtgctgtgactgtaaatgcaatttgacagaa
aaatgtttttcacgggaagggagactgtactgcaaaaacgacttttttaggagattcggc
acaaagtgtggaggttgcgcccaggggatctcgcccaacgatttggttcgaagggcaaag
agcaaagtgtttcacctgaactgtttcacgtgtatgatgtgtaacaaacagctatccacc
ggagaggaaatgtacattctagatgaatttaaatttgtttgtaaagaggattatctaagc
aacagcaacggaaaggacacaaccctcctctcagtcacgacttgcagtgacccaagtcta
tctccagattcccaagacccacaggatgatagtaaagattcggaaatcggacatttatcc
gataaagaggtgggcagcaatgaaaacgacgagcagaacgtaggggggaaacgacgtggg
ccgcgaaccaccatcaaagccaagcaactggaggtcctcaaagctgctttcgcggccacg
ccaaaacccacccggcacatccgagaacagctggcgcaggagacagggctcaacatgaga
gtaatccaggtatggttccaaaaccggcggtctaaagagcggcgcatgaagcagttaagc
gtgctgggtgcaagaaggcacgcgttcttccgcggtccaaggagaatgagaactctggtc
gaccgactcgaacccggggagctgatccccaacggtcatttctcatactatggtgattat
cagagtgaatactatgggcctggaggaaattttgagtactacacccaaggccccccatcg
tcacaggcccagaccccaggggacctaggcttctcctctggccctgctggcaccccttta
gggggcatggaccatcacctagctgggcatcacccatccagtgaggtgcagtgcttcaat
gacatcatatctcaccatccagcggactcacctagcccagagcccaacggacctgggtca
atgcacagcatctccagtgagatgtgtggccccagcacacccttcacatcactgtccctc
aacggcagcggatacagcaaccaactgtcacacccctcctcagagatgagcgaaggcact
gtctggtag
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