Oncorhynchus mykiss (rainbow trout): 110533956
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Entry
110533956 CDS
T07259
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03440
Homologous recombination
omy04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110533956
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110533956
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110533956
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110533956
03036 Chromosome and associated proteins [BR:
omy03036
]
110533956
03400 DNA repair and recombination proteins [BR:
omy03400
]
110533956
Peptidases and inhibitors [BR:
omy01002
]
Metallo peptidases
Family M67
110533956
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
110533956
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
110533956
BRISC complex
110533956
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
110533956
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
110533956
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
REP_ORF2-G2P
DUF7385
Motif
Other DBs
NCBI-GeneID:
110533956
NCBI-ProteinID:
XP_021474228
Ensembl:
ENSOMYG00000025196
LinkDB
All DBs
Position
10:complement(43534280..43542281)
Genome browser
AA seq
260 aa
AA seq
DB search
MAVSAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVIILRRSDKRKDRV
EISPEQLSSAATEAERLAEMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFV
GLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERIEIPIHVIPHEAIGKVCLESAVEL
PRILCQEEQDTYRKIHSLTQLDPITKIHNGSVFTKNLCSQMSAVSGPLLQWLENRLEQNK
QNIIELQLEKERLTQELATM
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgagcgcagttcacctcgaatcagatgcttttttggtttgcatgaatcatgca
ttaagtaccgagaaggaggaagtaatgggactgtgcatcggggaggtggacaccaaccgc
atcgtccacattcattctgttattattctccgacgctcggacaagaggaaggatcgcgtg
gaaatttcgcctgagcagctgtcttcagcggcaaccgaagcggagaggttggctgaaatg
actggacggccgatgcgtgtagttggttggtaccactctcacccccacatcactgtgtgg
ccatcacatgtggatgtgaggacacaggctatgtatcaaatgatggaccagggctttgtt
gggctgatattctcctgcttcattgaggataagaacacaaaaaccggtcgagttctctac
acctgcttccagtctgtccaagcccagaaaggctctgagtacgagagaatcgagatccca
attcatgtgattccacacgaggccattgggaaagtgtgccttgagtcagcagtggagctt
cccagaatcctctgccaggaagagcaggacacctacagaaagattcacagcttaactcaa
ctggatccgatcacgaagatacacaatggctcagtcttcactaagaacctgtgcagccag
atgtctgctgtgagtggtcccctgctgcagtggctggagaatcgtctggagcagaacaaa
cagaacatcattgagctgcagctagagaaagagagactaactcaggagttggcaaccatg
tga
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